RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 TRAV26-1A0A087WT03 109 aa12.02□□□□□ -0.49
CLN6-202ENST00000538696 A0A0J9YY99 117 aa12.02□□□□□ -0.49
CLN6-202ENST00000538696 TRBV10-1A0A0K0K1A3 114 aa12.02□□□□□ -0.49
CLN6-202ENST00000538696 LOC100131303A0A0U1RQF7 123 aa12.02□□□□□ -0.49
CLN6-202ENST00000538696 TRBV6-4A0A1B0GX49 114 aa12.02□□□□□ -0.49
CLN6-202ENST00000538696 I3L3M4 83 aa12.02□□□□□ -0.49
CLN6-202ENST00000538696 K7EMI3 77 aa12.02□□□□□ -0.49
CLN6-202ENST00000538696 BTF3P20290 206 aaKnown RBP12.02□□□□□ -0.49
CLN6-202ENST00000538696 KIR2DL4Q99706 377 aa12.02□□□□□ -0.49
CLN6-202ENST00000538696 PRO0255Q9UI72 69 aa12.02□□□□□ -0.49
CLN6-202ENST00000538696 HSPB8Q9UJY1 196 aa12.02□□□□□ -0.49
CLN6-202ENST00000538696 IGHV3-38A0A0C4DH36 116 aa12.01□□□□□ -0.49
CLN6-202ENST00000538696 GAGE12JA6NER3 117 aa12.01□□□□□ -0.49
CLN6-202ENST00000538696 GAGE1Q13065 139 aa12.01□□□□□ -0.49
CLN6-202ENST00000538696 GAGE4Q13068 117 aa12.01□□□□□ -0.49
CLN6-202ENST00000538696 GAGE5Q13069 117 aa12.01□□□□□ -0.49
CLN6-202ENST00000538696 GAGE13Q4V321 117 aa12.01□□□□□ -0.49
CLN6-202ENST00000538696 CDPF1Q6NVV7 123 aa12.01□□□□□ -0.49
CLN6-202ENST00000538696 LINC00518Q8N0U6 118 aa12.01□□□□□ -0.49
CLN6-202ENST00000538696 Q8N976 141 aa12.01□□□□□ -0.49
CLN6-202ENST00000538696 ZNRF2Q8NHG8 242 aa12.01□□□□□ -0.49
CLN6-202ENST00000538696 HHLA3Q9XRX5 114 aa12.01□□□□□ -0.49
CLN6-202ENST00000538696 CSMD3Q7Z407 3707 aa12.01□□□□□ -0.49
CLN6-202ENST00000538696 PLECQ15149 4684 aaKnown RBP12□□□□□ -0.49
CLN6-202ENST00000538696 IGLL5B9A064 214 aa12□□□□□ -0.49
CLN6-202ENST00000538696 C3orf84H3BNL1 204 aa12□□□□□ -0.49
CLN6-202ENST00000538696 PAX4O43316 350 aa12□□□□□ -0.49
CLN6-202ENST00000538696 RPL36AP83881 106 aaKnown RBP12□□□□□ -0.49
CLN6-202ENST00000538696 RHOHQ15669 191 aa12□□□□□ -0.49
CLN6-202ENST00000538696 SPATA12Q7Z6I5 190 aa12□□□□□ -0.49
CLN6-202ENST00000538696 RPL36ALQ969Q0 106 aaKnown RBP12□□□□□ -0.49
CLN6-202ENST00000538696 KLK5Q9Y337 293 aaPredicted RBP12□□□□□ -0.49
CLN6-202ENST00000538696 TRBV7-3A0A075B6L6 115 aa11.99□□□□□ -0.49
CLN6-202ENST00000538696 UBE2D3P61077 147 aa11.99□□□□□ -0.49
CLN6-202ENST00000538696 UBE2D2P62837 147 aa11.99□□□□□ -0.49
CLN6-202ENST00000538696 SCGB1D1O95968 90 aa11.98□□□□□ -0.49
CLN6-202ENST00000538696 CASC10Q5T4H9 136 aa11.98□□□□□ -0.49
CLN6-202ENST00000538696 C2orf66Q6UXQ4 117 aa11.98□□□□□ -0.49
CLN6-202ENST00000538696 TOMM6Q96B49 74 aa11.98□□□□□ -0.49
CLN6-202ENST00000538696 C12orf57Q99622 126 aa11.98□□□□□ -0.49
CLN6-202ENST00000538696 PRADC1Q9BSG0 188 aa11.98□□□□□ -0.49
CLN6-202ENST00000538696 H3BNG1 76 aa11.97□□□□□ -0.49
CLN6-202ENST00000538696 SYS1-DBNDD2H3BUS1 97 aa11.97□□□□□ -0.49
CLN6-202ENST00000538696 LINC00694P0DN24 101 aa11.97□□□□□ -0.49
CLN6-202ENST00000538696 IFI27L1Q96BM0 104 aa11.97□□□□□ -0.49
CLN6-202ENST00000538696 MAP1LC3CQ9BXW4 147 aa11.97□□□□□ -0.49
CLN6-202ENST00000538696 GYPEP15421 78 aa11.96□□□□□ -0.49
CLN6-202ENST00000538696 APLNQ9ULZ1 77 aa11.96□□□□□ -0.49
CLN6-202ENST00000538696 CYSLTR1Q9Y271 337 aa11.96□□□□□ -0.49
CLN6-202ENST00000538696 H0Y8G0 127 aa11.95□□□□□ -0.5
CLN6-202ENST00000538696 RPL39P62891 51 aaKnown RBP11.95□□□□□ -0.5
CLN6-202ENST00000538696 COTL1Q14019 142 aa11.95□□□□□ -0.5
CLN6-202ENST00000538696 C15orf53Q8NAA6 179 aa11.95□□□□□ -0.5
CLN6-202ENST00000538696 A0A096LPF7 62 aa11.94□□□□□ -0.5
CLN6-202ENST00000538696 ATP5LO75964 103 aa11.94□□□□□ -0.5
CLN6-202ENST00000538696 PET117Q6UWS5 81 aa11.94□□□□□ -0.5
CLN6-202ENST00000538696 C20orf203Q8NBC4 194 aa11.94□□□□□ -0.5
CLN6-202ENST00000538696 CHCHD7Q9BUK0 85 aa11.94□□□□□ -0.5
CLN6-202ENST00000538696 ICOSQ9Y6W8 199 aa11.94□□□□□ -0.5
CLN6-202ENST00000538696 DAZ4Q86SG3 579 aaKnown RBP11.93□□□□□ -0.5
CLN6-202ENST00000538696 SCGB3A1Q96QR1 104 aa11.93□□□□□ -0.5
CLN6-202ENST00000538696 DAZ3Q9NR90 486 aaKnown RBP11.93□□□□□ -0.5
CLN6-202ENST00000538696 G0S2P27469 103 aa11.92□□□□□ -0.5
CLN6-202ENST00000538696 TCTAP57738 103 aa11.92□□□□□ -0.5
CLN6-202ENST00000538696 MRPL23Q16540 153 aaKnown RBP11.91□□□□□ -0.5
CLN6-202ENST00000538696 LINC01545Q5VT33 79 aa11.91□□□□□ -0.5
CLN6-202ENST00000538696 NTM-AS1Q6ZSK4 140 aa11.91□□□□□ -0.5
CLN6-202ENST00000538696 IGIPA6NJ69 53 aa11.9□□□□□ -0.5
CLN6-202ENST00000538696 PMCHL2Q9BQD1 86 aa11.9□□□□□ -0.5
CLN6-202ENST00000538696 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.89□□□□□ -0.51
CLN6-202ENST00000538696 C20orf202A1L168 122 aa11.89□□□□□ -0.51
CLN6-202ENST00000538696 IGKV2-29A2NJV5 120 aaPredicted RBP11.89□□□□□ -0.51
CLN6-202ENST00000538696 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.89□□□□□ -0.51
CLN6-202ENST00000538696 TEX43Q6ZNM6 134 aa11.89□□□□□ -0.51
CLN6-202ENST00000538696 ERASQ7Z444 233 aa11.89□□□□□ -0.51
CLN6-202ENST00000538696 ATOH7Q8N100 152 aa11.89□□□□□ -0.51
CLN6-202ENST00000538696 LINC01549A6NIU2 74 aa11.88□□□□□ -0.51
CLN6-202ENST00000538696 PRSS1P07477 247 aa11.88□□□□□ -0.51
CLN6-202ENST00000538696 Q6ZN92 141 aa11.88□□□□□ -0.51
CLN6-202ENST00000538696 BAALCQ8WXS3 180 aa11.88□□□□□ -0.51
CLN6-202ENST00000538696 TIMM17AQ99595 171 aa11.88□□□□□ -0.51
CLN6-202ENST00000538696 ALMS1Q8TCU4 4167 aa11.88□□□□□ -0.51
CLN6-202ENST00000538696 LGALS9CQ6DKI2 356 aa11.87□□□□□ -0.51
CLN6-202ENST00000538696 TMEM141Q96I45 108 aa11.87□□□□□ -0.51
CLN6-202ENST00000538696 ODF1Q14990 250 aa11.86□□□□□ -0.51
CLN6-202ENST00000538696 ZC2HC1BQ5TFG8 222 aa11.86□□□□□ -0.51
CLN6-202ENST00000538696 ATP6V0E2Q8NHE4 81 aa11.86□□□□□ -0.51
CLN6-202ENST00000538696 OPRPNQ99935 248 aaPredicted RBP11.86□□□□□ -0.51
CLN6-202ENST00000538696 GTSF1LQ9H1H1 148 aa11.86□□□□□ -0.51
CLN6-202ENST00000538696 TENM2Q9NT68 2774 aa11.86□□□□□ -0.51
CLN6-202ENST00000538696 SH2D6Q7Z4S9 175 aa11.86□□□□□ -0.51
CLN6-202ENST00000538696 IGLV4-3A0A075B6K6 122 aa11.85□□□□□ -0.51
CLN6-202ENST00000538696 ESRGQ1W209 222 aa11.85□□□□□ -0.51
CLN6-202ENST00000538696 LYPD5Q6UWN5 251 aa11.85□□□□□ -0.51
CLN6-202ENST00000538696 TMEM243Q9BU79 118 aa11.85□□□□□ -0.51
CLN6-202ENST00000538696 UBE2D4Q9Y2X8 147 aa11.85□□□□□ -0.51
CLN6-202ENST00000538696 A0A087WX48 190 aa11.84□□□□□ -0.51
CLN6-202ENST00000538696 TRAV12-1A0A0B4J245 112 aa11.84□□□□□ -0.51
CLN6-202ENST00000538696 FAM104AQ969W3 186 aa11.84□□□□□ -0.51
CLN6-202ENST00000538696 SPANXA1Q9NS26 97 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms