RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 BORCS7-ASMTA0A0B4J1R7 106 aa3.3□□□□□ -1.88
SNHG1-204ENST00000537068 G3V3Q6 166 aa3.3□□□□□ -1.88
SNHG1-204ENST00000537068 M0QY20 66 aa3.3□□□□□ -1.88
SNHG1-204ENST00000537068 S100A9P06702 114 aaKnown RBP3.3□□□□□ -1.88
SNHG1-204ENST00000537068 GIPP09681 153 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-204ENST00000537068 KRTAP10-8P60410 259 aa3.3□□□□□ -1.88
SNHG1-204ENST00000537068 REG3AQ06141 175 aa3.3□□□□□ -1.88
SNHG1-204ENST00000537068 ZNF56Q15929 161 aa3.3□□□□□ -1.88
SNHG1-204ENST00000537068 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.3□□□□□ -1.88
SNHG1-204ENST00000537068 STOML3Q8TAV4 291 aa3.3□□□□□ -1.88
SNHG1-204ENST00000537068 SPACA4Q8TDM5 124 aa3.3□□□□□ -1.88
SNHG1-204ENST00000537068 MBD3L1Q8WWY6 194 aa3.3□□□□□ -1.88
SNHG1-204ENST00000537068 TMEM18Q96B42 140 aa3.3□□□□□ -1.88
SNHG1-204ENST00000537068 DERL1Q9BUN8 251 aa3.3□□□□□ -1.88
SNHG1-204ENST00000537068 CYTL1Q9NRR1 136 aa3.3□□□□□ -1.88
SNHG1-204ENST00000537068 IGLV4-60A0A075B6I1 120 aa3.29□□□□□ -1.88
SNHG1-204ENST00000537068 IGHV3-64A0A075B6Q5 118 aa3.29□□□□□ -1.88
SNHG1-204ENST00000537068 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-204ENST00000537068 IGHV1-24A0A0C4DH33 117 aa3.29□□□□□ -1.88
SNHG1-204ENST00000537068 MAP1LC3B2A6NCE7 125 aa3.29□□□□□ -1.88
SNHG1-204ENST00000537068 AKR1C3P42330 323 aa3.29□□□□□ -1.88
SNHG1-204ENST00000537068 CAMPP49913 170 aa3.29□□□□□ -1.88
SNHG1-204ENST00000537068 GAGE6Q13070 117 aa3.29□□□□□ -1.88
SNHG1-204ENST00000537068 AKR1C8PQ5T2L2 129 aa3.29□□□□□ -1.88
SNHG1-204ENST00000537068 INO80EQ8NBZ0 244 aaPredicted RBP3.29□□□□□ -1.88
SNHG1-204ENST00000537068 PGLYRP4Q96LB8 373 aa3.29□□□□□ -1.88
SNHG1-204ENST00000537068 MAP1LC3BQ9GZQ8 125 aa3.29□□□□□ -1.88
SNHG1-204ENST00000537068 GFRA4Q9GZZ7 299 aa3.29□□□□□ -1.88
SNHG1-204ENST00000537068 MED28Q9H204 178 aa3.29□□□□□ -1.88
SNHG1-204ENST00000537068 LRP2P98164 4655 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 IGLV10-54A0A075B6I4 117 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 hDV102S1A0JD36 115 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 PHOX2AO14813 284 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 IGLC6P0CF74 106 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 CHTF8P0CG12 524 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 SRSF9Q13242 221 aaKnown RBP eCLIP3.28□□□□□ -1.88
SNHG1-204ENST00000537068 KRTAP15-1Q3LI76 137 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 SPANXN1Q5VSR9 72 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 CST9LP1Q5W188 147 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 CLPSL2Q6UWE3 100 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 TMUB2Q71RG4 321 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 BAGE2Q86Y30 109 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 C15orf56Q8N910 161 aa3.28□□□□□ -1.88
SNHG1-204ENST00000537068 MUC21A0A0G2JKD1 596 aa3.27□□□□□ -1.89
SNHG1-204ENST00000537068 A0A0J9YXV3 536 aa3.27□□□□□ -1.89
SNHG1-204ENST00000537068 MUC21A0A140T8X8 626 aa3.27□□□□□ -1.89
SNHG1-204ENST00000537068 C19orf71A6NCJ1 209 aa3.27□□□□□ -1.89
SNHG1-204ENST00000537068 H7C1H1 209 aa3.27□□□□□ -1.89
SNHG1-204ENST00000537068 VCYO14598 125 aa3.27□□□□□ -1.89
SNHG1-204ENST00000537068 NDUFS6O75380 124 aaKnown RBP3.27□□□□□ -1.89
SNHG1-204ENST00000537068 RPS10P46783 165 aaKnown RBP3.27□□□□□ -1.89
SNHG1-204ENST00000537068 COX6A2Q02221 97 aa3.27□□□□□ -1.89
SNHG1-204ENST00000537068 PRSS3P2Q8NHM4 247 aa3.27□□□□□ -1.89
SNHG1-204ENST00000537068 AP1S3Q96PC3 154 aa3.27□□□□□ -1.89
SNHG1-204ENST00000537068 TMEM243Q9BU79 118 aa3.27□□□□□ -1.89
SNHG1-204ENST00000537068 NIT2Q9NQR4 276 aa3.27□□□□□ -1.89
SNHG1-204ENST00000537068 FXYD6-FXYD2A0A087WZ82 144 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 UMAD1C9J7I0 102 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 F2Z2F3 143 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 SMIM17P0DL12 118 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 CACNG7P62955 275 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 PRR3P79522 188 aaKnown RBP3.26□□□□□ -1.89
SNHG1-204ENST00000537068 ZNF345Q14585 488 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 WDR73Q6P4I2 378 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 RASL11AQ6T310 242 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 SPINK6Q6UWN8 80 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 FER1L6-AS1Q8NA97 138 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 C7orf33Q8WU49 177 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 SFT2D1Q8WV19 159 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 C11orf52Q96A22 123 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 SMIM12Q96EX1 92 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 DPH3Q96FX2 82 aa3.26□□□□□ -1.89
SNHG1-204ENST00000537068 TNXBP22105 4242 aa3.25□□□□□ -1.89
SNHG1-204ENST00000537068 A0A096LNI7 61 aa3.25□□□□□ -1.89
SNHG1-204ENST00000537068 GVQW2A0A096LPI5 108 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-204ENST00000537068 H7C423 109 aa3.25□□□□□ -1.89
SNHG1-204ENST00000537068 ARPC5O15511 151 aa3.25□□□□□ -1.89
SNHG1-204ENST00000537068 NTF3P20783 257 aa3.25□□□□□ -1.89
SNHG1-204ENST00000537068 RPL35P42766 123 aaKnown RBP3.25□□□□□ -1.89
SNHG1-204ENST00000537068 RAB5CP51148 216 aa3.25□□□□□ -1.89
SNHG1-204ENST00000537068 NKX2-5P52952 324 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-204ENST00000537068 RPS20P60866 119 aaKnown RBP3.25□□□□□ -1.89
SNHG1-204ENST00000537068 C10orf25Q5T742 122 aa3.25□□□□□ -1.89
SNHG1-204ENST00000537068 C9orf62Q8N4C0 152 aa3.25□□□□□ -1.89
SNHG1-204ENST00000537068 KCNRGQ8N5I3 272 aa3.25□□□□□ -1.89
SNHG1-204ENST00000537068 CNFNQ9BYD5 112 aa3.25□□□□□ -1.89
SNHG1-204ENST00000537068 DPH3P1Q9H4G8 78 aa3.25□□□□□ -1.89
SNHG1-204ENST00000537068 RNF213Q63HN8 5207 aa3.24□□□□□ -1.89
SNHG1-204ENST00000537068 TRBV20OR9-2A0A075B6H5 130 aa3.24□□□□□ -1.89
SNHG1-204ENST00000537068 TRAV1-1A0A0B4J248 108 aa3.24□□□□□ -1.89
SNHG1-204ENST00000537068 HMSDA8MTL9 139 aa3.24□□□□□ -1.89
SNHG1-204ENST00000537068 TRGC1P0CF51 173 aa3.24□□□□□ -1.89
SNHG1-204ENST00000537068 SSTP61278 116 aa3.24□□□□□ -1.89
SNHG1-204ENST00000537068 CCL20P78556 96 aa3.24□□□□□ -1.89
SNHG1-204ENST00000537068 COTL1Q14019 142 aa3.24□□□□□ -1.89
SNHG1-204ENST00000537068 MAJINQ3KP22 176 aa3.24□□□□□ -1.89
SNHG1-204ENST00000537068 LYZL1Q6UWQ5 148 aa3.24□□□□□ -1.89
SNHG1-204ENST00000537068 STPG4Q8N801 248 aa3.24□□□□□ -1.89
SNHG1-204ENST00000537068 GATD1Q8NB37 220 aa3.24□□□□□ -1.89
SNHG1-204ENST00000537068 GTSF1Q8WW33 167 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms