RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CHD6Q8TD26 2715 aa9.84□□□□□ -0.83
SMG6-203ENST00000536871 P0DMU3 169 aa9.84□□□□□ -0.83
SMG6-203ENST00000536871 FAM231AP0DMU4 169 aa9.84□□□□□ -0.83
SMG6-203ENST00000536871 FAM231CP0DMU5 169 aa9.84□□□□□ -0.83
SMG6-203ENST00000536871 DAZ2Q13117 558 aaKnown RBP9.84□□□□□ -0.83
SMG6-203ENST00000536871 PHLDA1Q8WV24 401 aaPredicted RBP9.84□□□□□ -0.83
SMG6-203ENST00000536871 GEMIN7Q9H840 131 aaKnown RBP9.84□□□□□ -0.83
SMG6-203ENST00000536871 SPANXA1Q9NS26 97 aa9.84□□□□□ -0.83
SMG6-203ENST00000536871 IGLV4-69A0A075B6H9 119 aa9.83□□□□□ -0.84
SMG6-203ENST00000536871 TCTAP57738 103 aa9.83□□□□□ -0.84
SMG6-203ENST00000536871 PDZD2O15018 2839 aa9.83□□□□□ -0.84
SMG6-203ENST00000536871 AGRNO00468 2067 aa9.83□□□□□ -0.84
SMG6-203ENST00000536871 PRADC1Q9BSG0 188 aa9.83□□□□□ -0.84
SMG6-203ENST00000536871 C19orf73Q9NVV2 129 aa9.83□□□□□ -0.84
SMG6-203ENST00000536871 MYO9AB2RTY4 2548 aa9.82□□□□□ -0.84
SMG6-203ENST00000536871 FLNAP21333 2647 aaKnown RBP9.82□□□□□ -0.84
SMG6-203ENST00000536871 TRAV4A0A0B4J268 109 aa9.82□□□□□ -0.84
SMG6-203ENST00000536871 CEND1Q8N111 149 aa9.82□□□□□ -0.84
SMG6-203ENST00000536871 RAB37Q96AX2 223 aa9.82□□□□□ -0.84
SMG6-203ENST00000536871 IGHV3-73A0A0B4J1V6 119 aa9.81□□□□□ -0.84
SMG6-203ENST00000536871 HIST2H2BDQ6DRA6 164 aa9.81□□□□□ -0.84
SMG6-203ENST00000536871 CCDC168Q8NDH2 2452 aa9.81□□□□□ -0.84
SMG6-203ENST00000536871 TENM4Q6N022 2769 aa9.81□□□□□ -0.84
SMG6-203ENST00000536871 IGHV3OR16-12A0A075B7B8 117 aa9.81□□□□□ -0.84
SMG6-203ENST00000536871 TRGV1A0A0A0MS02 117 aa9.81□□□□□ -0.84
SMG6-203ENST00000536871 GCSHP23434 173 aa9.81□□□□□ -0.84
SMG6-203ENST00000536871 LINC00482Q8N8I6 264 aa9.81□□□□□ -0.84
SMG6-203ENST00000536871 SMR3AQ99954 134 aa9.81□□□□□ -0.84
SMG6-203ENST00000536871 IGLV4-3A0A075B6K6 122 aa9.8□□□□□ -0.84
SMG6-203ENST00000536871 TIMM21Q9BVV7 248 aa9.8□□□□□ -0.84
SMG6-203ENST00000536871 RPL36AP83881 106 aaKnown RBP9.79□□□□□ -0.84
SMG6-203ENST00000536871 RRN3P1Q2M238 152 aa9.79□□□□□ -0.84
SMG6-203ENST00000536871 DAZ4Q86SG3 579 aaKnown RBP9.79□□□□□ -0.84
SMG6-203ENST00000536871 MAPKAPK5-AS1Q8N8E1 139 aa9.79□□□□□ -0.84
SMG6-203ENST00000536871 RPL36ALQ969Q0 106 aaKnown RBP9.79□□□□□ -0.84
SMG6-203ENST00000536871 AMELXQ99217 191 aa9.79□□□□□ -0.84
SMG6-203ENST00000536871 OVOL2Q9BRP0 275 aa9.79□□□□□ -0.84
SMG6-203ENST00000536871 DAZ3Q9NR90 486 aaKnown RBP9.79□□□□□ -0.84
SMG6-203ENST00000536871 ZNF815PA8K554 130 aa9.79□□□□□ -0.84
SMG6-203ENST00000536871 TMEM170BQ5T4T1 132 aa9.79□□□□□ -0.84
SMG6-203ENST00000536871 C9orf66Q5T8R8 295 aa9.79□□□□□ -0.84
SMG6-203ENST00000536871 HIST1H4GQ99525 98 aa9.79□□□□□ -0.84
SMG6-203ENST00000536871 TRBV7-3A0A075B6L6 115 aa9.78□□□□□ -0.84
SMG6-203ENST00000536871 IGLL5B9A064 214 aa9.78□□□□□ -0.84
SMG6-203ENST00000536871 GAGE13Q4V321 117 aa9.78□□□□□ -0.84
SMG6-203ENST00000536871 SCGB1D4Q6XE38 83 aa9.78□□□□□ -0.84
SMG6-203ENST00000536871 PLEKHB2Q96CS7 222 aa9.78□□□□□ -0.84
SMG6-203ENST00000536871 ZNF479Q96JC4 524 aa9.78□□□□□ -0.84
SMG6-203ENST00000536871 NAA38Q9BRA0 125 aaKnown RBP9.78□□□□□ -0.84
SMG6-203ENST00000536871 TTTY13Q9BZ97 58 aa9.78□□□□□ -0.84
SMG6-203ENST00000536871 TLN2Q9Y4G6 2542 aa9.78□□□□□ -0.84
SMG6-203ENST00000536871 SONP18583 2426 aaKnown RBP9.77□□□□□ -0.84
SMG6-203ENST00000536871 UNC79Q9P2D8 2635 aa9.77□□□□□ -0.84
SMG6-203ENST00000536871 K7EQD1 137 aa9.77□□□□□ -0.85
SMG6-203ENST00000536871 PRM2P04554 102 aa9.77□□□□□ -0.85
SMG6-203ENST00000536871 GIG44P09565 113 aaPredicted RBP9.77□□□□□ -0.85
SMG6-203ENST00000536871 FXYD2P54710 66 aa9.77□□□□□ -0.85
SMG6-203ENST00000536871 MRPS36P82909 103 aaKnown RBP9.77□□□□□ -0.85
SMG6-203ENST00000536871 CHCHD7Q9BUK0 85 aa9.77□□□□□ -0.85
SMG6-203ENST00000536871 PRO0461Q9UI25 63 aa9.77□□□□□ -0.85
SMG6-203ENST00000536871 ERG28Q9UKR5 140 aa9.77□□□□□ -0.85
SMG6-203ENST00000536871 A0A1B0GWB2 263 aa9.76□□□□□ -0.85
SMG6-203ENST00000536871 INAFM1C9JVW0 142 aa9.76□□□□□ -0.85
SMG6-203ENST00000536871 H3BMG7 143 aa9.76□□□□□ -0.85
SMG6-203ENST00000536871 LEPROTO15243 131 aa9.76□□□□□ -0.85
SMG6-203ENST00000536871 LGALS3P17931 250 aaKnown RBP9.76□□□□□ -0.85
SMG6-203ENST00000536871 Q6ZSN1 163 aa9.76□□□□□ -0.85
SMG6-203ENST00000536871 CSNK1G2-AS1Q8NCQ2 148 aa9.76□□□□□ -0.85
SMG6-203ENST00000536871 ZNRF2Q8NHG8 242 aa9.76□□□□□ -0.85
SMG6-203ENST00000536871 SORL1Q92673 2214 aa9.76□□□□□ -0.85
SMG6-203ENST00000536871 HIVEP2P31629 2446 aa9.76□□□□□ -0.85
SMG6-203ENST00000536871 WFDC2Q14508 124 aa9.76□□□□□ -0.85
SMG6-203ENST00000536871 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
SMG6-203ENST00000536871 UBE2D4Q9Y2X8 147 aa9.76□□□□□ -0.85
SMG6-203ENST00000536871 TMEM223A0PJW6 202 aa9.75□□□□□ -0.85
SMG6-203ENST00000536871 CRLF1O75462 422 aa9.75□□□□□ -0.85
SMG6-203ENST00000536871 RPL35AP18077 110 aaKnown RBP9.75□□□□□ -0.85
SMG6-203ENST00000536871 KRTAP10-3P60369 221 aa9.75□□□□□ -0.85
SMG6-203ENST00000536871 CSDC2Q9Y534 153 aaKnown RBP9.75□□□□□ -0.85
SMG6-203ENST00000536871 TINCRA0A1B0GVN0 87 aa9.74□□□□□ -0.85
SMG6-203ENST00000536871 TRBV6-4A0A1B0GX49 114 aa9.74□□□□□ -0.85
SMG6-203ENST00000536871 SMIM9A6NGZ8 99 aa9.74□□□□□ -0.85
SMG6-203ENST00000536871 J3QQQ9 107 aa9.74□□□□□ -0.85
SMG6-203ENST00000536871 ETDBQ3ZM63 59 aa9.74□□□□□ -0.85
SMG6-203ENST00000536871 Q6ZTI0 123 aa9.74□□□□□ -0.85
SMG6-203ENST00000536871 NOP10Q9NPE3 64 aaKnown RBP9.74□□□□□ -0.85
SMG6-203ENST00000536871 HELZ2Q9BYK8 2649 aaKnown RBP9.74□□□□□ -0.85
SMG6-203ENST00000536871 FOXI1Q12951 378 aa9.74□□□□□ -0.85
SMG6-203ENST00000536871 DEFB104AQ8WTQ1 72 aa9.74□□□□□ -0.85
SMG6-203ENST00000536871 TRGV2A0A075B6R0 118 aa9.73□□□□□ -0.85
SMG6-203ENST00000536871 H7C423 109 aa9.73□□□□□ -0.85
SMG6-203ENST00000536871 ZNF22P17026 224 aaPredicted RBP9.73□□□□□ -0.85
SMG6-203ENST00000536871 DGAT2L7PQ6IED9 249 aa9.73□□□□□ -0.85
SMG6-203ENST00000536871 PLAC8L1A1L4L8 177 aa9.72□□□□□ -0.85
SMG6-203ENST00000536871 APOMO95445 188 aa9.72□□□□□ -0.85
SMG6-203ENST00000536871 SPINK8P0C7L1 97 aa9.72□□□□□ -0.85
SMG6-203ENST00000536871 EMP1P54849 157 aa9.72□□□□□ -0.85
SMG6-203ENST00000536871 GAGE5Q13069 117 aa9.72□□□□□ -0.85
SMG6-203ENST00000536871 GAGE6Q13070 117 aa9.72□□□□□ -0.85
SMG6-203ENST00000536871 SRSF9Q13242 221 aaKnown RBP eCLIP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms