RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 CHCHD1Q96BP2 118 aaKnown RBP9.89□□□□□ -0.83
CPSF1-206ENST00000531480 LINC01549A6NIU2 74 aa9.88□□□□□ -0.83
CPSF1-206ENST00000531480 FA2HQ7L5A8 372 aa9.88□□□□□ -0.83
CPSF1-206ENST00000531480 RNF185Q96GF1 192 aa9.88□□□□□ -0.83
CPSF1-206ENST00000531480 NBDYA0A0U1RRE5 68 aa9.87□□□□□ -0.83
CPSF1-206ENST00000531480 SIVA1O15304 175 aa9.87□□□□□ -0.83
CPSF1-206ENST00000531480 ST20Q9HBF5 79 aa9.87□□□□□ -0.83
CPSF1-206ENST00000531480 NIT2Q9NQR4 276 aa9.87□□□□□ -0.83
CPSF1-206ENST00000531480 DNAH10Q8IVF4 4471 aa9.86□□□□□ -0.83
CPSF1-206ENST00000531480 K7EP13 123 aa9.86□□□□□ -0.83
CPSF1-206ENST00000531480 VCYO14598 125 aa9.86□□□□□ -0.83
CPSF1-206ENST00000531480 HSBP1O75506 76 aa9.86□□□□□ -0.83
CPSF1-206ENST00000531480 TNFRSF6BO95407 300 aa9.86□□□□□ -0.83
CPSF1-206ENST00000531480 LINC00614P0C842 121 aa9.86□□□□□ -0.83
CPSF1-206ENST00000531480 DNAH10OSP0CZ25 163 aa9.86□□□□□ -0.83
CPSF1-206ENST00000531480 DAZ4Q86SG3 579 aaKnown RBP9.86□□□□□ -0.83
CPSF1-206ENST00000531480 C18orf32Q8TCD1 76 aa9.86□□□□□ -0.83
CPSF1-206ENST00000531480 TMEM18Q96B42 140 aa9.86□□□□□ -0.83
CPSF1-206ENST00000531480 DAZ3Q9NR90 486 aaKnown RBP9.86□□□□□ -0.83
CPSF1-206ENST00000531480 TNFRSF18Q9Y5U5 241 aa9.86□□□□□ -0.83
CPSF1-206ENST00000531480 DNAH2Q9P225 4427 aa9.86□□□□□ -0.83
CPSF1-206ENST00000531480 TRAV26-2A0A0B4J265 109 aa9.85□□□□□ -0.83
CPSF1-206ENST00000531480 PRSS47A8MTI9 375 aa9.85□□□□□ -0.83
CPSF1-206ENST00000531480 RPL32P62910 135 aaKnown RBP9.85□□□□□ -0.83
CPSF1-206ENST00000531480 WFDC10BQ8IUB3 73 aa9.85□□□□□ -0.83
CPSF1-206ENST00000531480 PACRGQ96M98 296 aaPredicted RBP9.85□□□□□ -0.83
CPSF1-206ENST00000531480 KIR2DL4Q99706 377 aa9.85□□□□□ -0.83
CPSF1-206ENST00000531480 KRTAP1-5Q9BYS1 174 aa9.85□□□□□ -0.83
CPSF1-206ENST00000531480 AP5S1Q9NUS5 200 aa9.85□□□□□ -0.83
CPSF1-206ENST00000531480 IGLV2-18A0A075B6J9 118 aa9.84□□□□□ -0.83
CPSF1-206ENST00000531480 TRBV6-5A0A0K0K1A5 114 aa9.84□□□□□ -0.83
CPSF1-206ENST00000531480 BTF3P20290 206 aaKnown RBP9.84□□□□□ -0.83
CPSF1-206ENST00000531480 SUMO2P61956 95 aaKnown RBP9.84□□□□□ -0.83
CPSF1-206ENST00000531480 SNRPEP62304 92 aaKnown RBP9.84□□□□□ -0.83
CPSF1-206ENST00000531480 LINC01556Q5JQF7 62 aa9.84□□□□□ -0.83
CPSF1-206ENST00000531480 FRAS1Q86XX4 4008 aa9.84□□□□□ -0.83
CPSF1-206ENST00000531480 TRAV8-6A0A0B4J262 113 aa9.83□□□□□ -0.84
CPSF1-206ENST00000531480 C5orf52A6NGY3 159 aa9.83□□□□□ -0.84
CPSF1-206ENST00000531480 ESDP10768 282 aa9.83□□□□□ -0.84
CPSF1-206ENST00000531480 ORMDL2Q53FV1 153 aa9.83□□□□□ -0.84
CPSF1-206ENST00000531480 TMEM97Q5BJF2 176 aa9.83□□□□□ -0.84
CPSF1-206ENST00000531480 TTC32Q5I0X7 151 aa9.83□□□□□ -0.84
CPSF1-206ENST00000531480 NTM-AS1Q6ZSK4 140 aa9.83□□□□□ -0.84
CPSF1-206ENST00000531480 NIT1Q86X76 327 aa9.83□□□□□ -0.84
CPSF1-206ENST00000531480 Q8N8P6 123 aa9.83□□□□□ -0.84
CPSF1-206ENST00000531480 TRBV6-8A0A0A6YYG3 113 aa9.82□□□□□ -0.84
CPSF1-206ENST00000531480 IGHV3-38A0A0C4DH36 116 aa9.82□□□□□ -0.84
CPSF1-206ENST00000531480 GAS8-AS1O95177 125 aa9.82□□□□□ -0.84
CPSF1-206ENST00000531480 SMAGPQ0VAQ4 97 aa9.82□□□□□ -0.84
CPSF1-206ENST00000531480 RNASEKQ6P5S7 137 aaKnown RBP9.82□□□□□ -0.84
CPSF1-206ENST00000531480 RPL39LQ96EH5 51 aaKnown RBP9.82□□□□□ -0.84
CPSF1-206ENST00000531480 LOC389332A0A1B0GUA5 103 aa9.81□□□□□ -0.84
CPSF1-206ENST00000531480 M0R2N4 97 aa9.81□□□□□ -0.84
CPSF1-206ENST00000531480 AKR1D1P51857 326 aa9.81□□□□□ -0.84
CPSF1-206ENST00000531480 NRACQ8N912 160 aa9.81□□□□□ -0.84
CPSF1-206ENST00000531480 DNAH17Q9UFH2 4485 aa9.8□□□□□ -0.84
CPSF1-206ENST00000531480 I3L3M4 83 aa9.8□□□□□ -0.84
CPSF1-206ENST00000531480 SERF1AO75920 110 aa9.8□□□□□ -0.84
CPSF1-206ENST00000531480 NCR2O95944 276 aa9.8□□□□□ -0.84
CPSF1-206ENST00000531480 NPYP01303 97 aa9.8□□□□□ -0.84
CPSF1-206ENST00000531480 FCER1GP30273 86 aa9.8□□□□□ -0.84
CPSF1-206ENST00000531480 IQCJQ1A5X6 159 aa9.8□□□□□ -0.84
CPSF1-206ENST00000531480 CHCHD7Q9BUK0 85 aa9.8□□□□□ -0.84
CPSF1-206ENST00000531480 HSPB8Q9UJY1 196 aa9.8□□□□□ -0.84
CPSF1-206ENST00000531480 SMKR1H3BMG3 65 aa9.79□□□□□ -0.84
CPSF1-206ENST00000531480 POLR2KP53803 58 aaKnown RBP9.79□□□□□ -0.84
CPSF1-206ENST00000531480 LAGE3Q14657 143 aa9.79□□□□□ -0.84
CPSF1-206ENST00000531480 SMIM2Q9BVW6 85 aa9.79□□□□□ -0.84
CPSF1-206ENST00000531480 TRAV9-2A0A087WT02 112 aa9.78□□□□□ -0.84
CPSF1-206ENST00000531480 TRBV27A0A0K0K1C4 114 aa9.78□□□□□ -0.84
CPSF1-206ENST00000531480 SDHAF1A6NFY7 115 aa9.78□□□□□ -0.84
CPSF1-206ENST00000531480 RTL8CO15255 209 aa9.78□□□□□ -0.84
CPSF1-206ENST00000531480 IFI27P40305 119 aaPredicted RBP9.78□□□□□ -0.84
CPSF1-206ENST00000531480 AMTP48728 403 aa9.78□□□□□ -0.84
CPSF1-206ENST00000531480 C10orf126Q8N4M7 172 aa9.78□□□□□ -0.84
CPSF1-206ENST00000531480 TMEM70Q9BUB7 260 aa9.78□□□□□ -0.84
CPSF1-206ENST00000531480 LINC01546A6NGU7 62 aa9.77□□□□□ -0.85
CPSF1-206ENST00000531480 C1orf134Q5TEV5 83 aa9.77□□□□□ -0.85
CPSF1-206ENST00000531480 HIST3H2BBQ8N257 126 aa9.77□□□□□ -0.85
CPSF1-206ENST00000531480 C6orf223Q8N319 242 aa9.77□□□□□ -0.85
CPSF1-206ENST00000531480 FAT2Q9NYQ8 4349 aa9.76□□□□□ -0.85
CPSF1-206ENST00000531480 TRBV25-1A0A075B6N4 114 aa9.76□□□□□ -0.85
CPSF1-206ENST00000531480 IGHV1-24A0A0C4DH33 117 aa9.76□□□□□ -0.85
CPSF1-206ENST00000531480 IBA57-AS1B1ANH7 110 aa9.76□□□□□ -0.85
CPSF1-206ENST00000531480 HBDP02042 147 aa9.76□□□□□ -0.85
CPSF1-206ENST00000531480 Q6ZRN7 208 aaPredicted RBP9.76□□□□□ -0.85
CPSF1-206ENST00000531480 KRTAP17-1Q9BYP8 105 aa9.76□□□□□ -0.85
CPSF1-206ENST00000531480 ATP5LO75964 103 aa9.75□□□□□ -0.85
CPSF1-206ENST00000531480 LEPROTL1O95214 131 aa9.75□□□□□ -0.85
CPSF1-206ENST00000531480 PKIAP61925 76 aa9.75□□□□□ -0.85
CPSF1-206ENST00000531480 COTL1Q14019 142 aa9.75□□□□□ -0.85
CPSF1-206ENST00000531480 LINC00336Q6ZUF6 198 aa9.75□□□□□ -0.85
CPSF1-206ENST00000531480 Q8N3U1 123 aa9.75□□□□□ -0.85
CPSF1-206ENST00000531480 FABP4P15090 132 aa9.74□□□□□ -0.85
CPSF1-206ENST00000531480 PAPPA-AS1Q5QFB9 102 aa9.74□□□□□ -0.85
CPSF1-206ENST00000531480 TSHBP01222 138 aa9.73□□□□□ -0.85
CPSF1-206ENST00000531480 IGHV3-30P01768 117 aa9.73□□□□□ -0.85
CPSF1-206ENST00000531480 IGHV3-33P01772 117 aa9.73□□□□□ -0.85
CPSF1-206ENST00000531480 IGHV3-30-3P0DP02 117 aa9.73□□□□□ -0.85
CPSF1-206ENST00000531480 IGHV3-30-5P0DP03 117 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms