RNA–Protein interactions for RNA: ENST00000531428.1

PIK3C2A-203, Transcript of phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha, humanhuman

TSL 1 (best)

Gene PIK3C2A, Length 1,593 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2A-203ENST00000531428 SPART-AS1P0CW21 52 aa11.17□□□□□ -0.62
PIK3C2A-203ENST00000531428 DAZ4Q86SG3 579 aaKnown RBP11.17□□□□□ -0.62
PIK3C2A-203ENST00000531428 SCGB3A1Q96QR1 104 aa11.17□□□□□ -0.62
PIK3C2A-203ENST00000531428 DAZ3Q9NR90 486 aaKnown RBP11.17□□□□□ -0.62
PIK3C2A-203ENST00000531428 COL7A1Q02388 2944 aa11.17□□□□□ -0.62
PIK3C2A-203ENST00000531428 LGALS9CQ6DKI2 356 aa11.16□□□□□ -0.62
PIK3C2A-203ENST00000531428 ZNRF2Q8NHG8 242 aa11.16□□□□□ -0.62
PIK3C2A-203ENST00000531428 WWC2-AS2Q96NR7 200 aa11.16□□□□□ -0.62
PIK3C2A-203ENST00000531428 PRADC1Q9BSG0 188 aa11.16□□□□□ -0.62
PIK3C2A-203ENST00000531428 DNAH9Q9NYC9 4486 aa11.16□□□□□ -0.62
PIK3C2A-203ENST00000531428 NACAE9PAV3 2078 aa11.16□□□□□ -0.62
PIK3C2A-203ENST00000531428 NBEAL2Q6ZNJ1 2754 aa11.16□□□□□ -0.62
PIK3C2A-203ENST00000531428 C20orf203Q8NBC4 194 aa11.16□□□□□ -0.62
PIK3C2A-203ENST00000531428 TMEM141Q96I45 108 aa11.16□□□□□ -0.62
PIK3C2A-203ENST00000531428 HHLA3Q9XRX5 114 aa11.16□□□□□ -0.62
PIK3C2A-203ENST00000531428 PRSS1P07477 247 aa11.15□□□□□ -0.62
PIK3C2A-203ENST00000531428 UBE2D3P61077 147 aa11.15□□□□□ -0.62
PIK3C2A-203ENST00000531428 UBE2D2P62837 147 aa11.15□□□□□ -0.62
PIK3C2A-203ENST00000531428 COTL1Q14019 142 aa11.15□□□□□ -0.62
PIK3C2A-203ENST00000531428 IGIPA6NJ69 53 aa11.14□□□□□ -0.63
PIK3C2A-203ENST00000531428 DAD1P61803 113 aa11.14□□□□□ -0.63
PIK3C2A-203ENST00000531428 TIMM17AQ99595 171 aa11.14□□□□□ -0.63
PIK3C2A-203ENST00000531428 VAMP8Q9BV40 100 aa11.14□□□□□ -0.63
PIK3C2A-203ENST00000531428 TRAV12-1A0A0B4J245 112 aa11.13□□□□□ -0.63
PIK3C2A-203ENST00000531428 DEFB4AO15263 64 aa11.13□□□□□ -0.63
PIK3C2A-203ENST00000531428 Q6ZN92 141 aa11.13□□□□□ -0.63
PIK3C2A-203ENST00000531428 PRO0255Q9UI72 69 aa11.13□□□□□ -0.63
PIK3C2A-203ENST00000531428 TRAV9-2A0A087WT02 112 aa11.12□□□□□ -0.63
PIK3C2A-203ENST00000531428 H0Y8G0 127 aa11.12□□□□□ -0.63
PIK3C2A-203ENST00000531428 NPSP0C0P6 89 aa11.12□□□□□ -0.63
PIK3C2A-203ENST00000531428 PKIAP61925 76 aa11.12□□□□□ -0.63
PIK3C2A-203ENST00000531428 ZNF664Q8N3J9 261 aa11.12□□□□□ -0.63
PIK3C2A-203ENST00000531428 C11orf68Q9H3H3 251 aaKnown RBP11.12□□□□□ -0.63
PIK3C2A-203ENST00000531428 ATP5G1P05496 136 aa11.11□□□□□ -0.63
PIK3C2A-203ENST00000531428 CRYBA4P53673 196 aa11.11□□□□□ -0.63
PIK3C2A-203ENST00000531428 GTSF1LQ9H1H1 148 aa11.11□□□□□ -0.63
PIK3C2A-203ENST00000531428 PYGO1Q9Y3Y4 419 aa11.11□□□□□ -0.63
PIK3C2A-203ENST00000531428 GAGE12JA6NER3 117 aa11.11□□□□□ -0.63
PIK3C2A-203ENST00000531428 RPL39P62891 51 aaKnown RBP11.11□□□□□ -0.63
PIK3C2A-203ENST00000531428 GAGE1Q13065 139 aa11.11□□□□□ -0.63
PIK3C2A-203ENST00000531428 GAGE4Q13068 117 aa11.11□□□□□ -0.63
PIK3C2A-203ENST00000531428 GAGE5Q13069 117 aa11.11□□□□□ -0.63
PIK3C2A-203ENST00000531428 ODF1Q14990 250 aa11.11□□□□□ -0.63
PIK3C2A-203ENST00000531428 GAGE13Q4V321 117 aa11.11□□□□□ -0.63
PIK3C2A-203ENST00000531428 RETNQ9HD89 108 aa11.11□□□□□ -0.63
PIK3C2A-203ENST00000531428 A0A087WX48 190 aa11.1□□□□□ -0.63
PIK3C2A-203ENST00000531428 TSTD3H0UI37 97 aa11.1□□□□□ -0.63
PIK3C2A-203ENST00000531428 LINC00694P0DN24 101 aa11.1□□□□□ -0.63
PIK3C2A-203ENST00000531428 DEFB104AQ8WTQ1 72 aa11.1□□□□□ -0.63
PIK3C2A-203ENST00000531428 PHLDA1Q8WV24 401 aaPredicted RBP11.1□□□□□ -0.63
PIK3C2A-203ENST00000531428 CHCHD7Q9BUK0 85 aa11.1□□□□□ -0.63
PIK3C2A-203ENST00000531428 CELA1Q9UNI1 258 aa11.1□□□□□ -0.63
PIK3C2A-203ENST00000531428 STAB2Q8WWQ8 2551 aa11.09□□□□□ -0.63
PIK3C2A-203ENST00000531428 TMEM97Q5BJF2 176 aa11.09□□□□□ -0.63
PIK3C2A-203ENST00000531428 PAPPA-AS1Q5QFB9 102 aa11.09□□□□□ -0.63
PIK3C2A-203ENST00000531428 BAALCQ8WXS3 180 aa11.09□□□□□ -0.63
PIK3C2A-203ENST00000531428 IGHV3-38A0A0C4DH36 116 aa11.08□□□□□ -0.64
PIK3C2A-203ENST00000531428 HSBP1L1C9JCN9 74 aa11.08□□□□□ -0.64
PIK3C2A-203ENST00000531428 ATOH7Q8N100 152 aa11.08□□□□□ -0.64
PIK3C2A-203ENST00000531428 TIMM21Q9BVV7 248 aa11.08□□□□□ -0.64
PIK3C2A-203ENST00000531428 SPANXA1Q9NS26 97 aa11.08□□□□□ -0.64
PIK3C2A-203ENST00000531428 PAM16Q9Y3D7 125 aa11.08□□□□□ -0.64
PIK3C2A-203ENST00000531428 PMCHL2Q9BQD1 86 aa11.07□□□□□ -0.64
PIK3C2A-203ENST00000531428 LOC100131303A0A0U1RQF7 123 aa11.07□□□□□ -0.64
PIK3C2A-203ENST00000531428 PAX4O43316 350 aa11.07□□□□□ -0.64
PIK3C2A-203ENST00000531428 DPM2O94777 84 aa11.07□□□□□ -0.64
PIK3C2A-203ENST00000531428 PLNP26678 52 aa11.07□□□□□ -0.64
PIK3C2A-203ENST00000531428 SMAGPQ0VAQ4 97 aa11.07□□□□□ -0.64
PIK3C2A-203ENST00000531428 PMVKQ15126 192 aa11.07□□□□□ -0.64
PIK3C2A-203ENST00000531428 PRSS29PA6NIE9 313 aa11.06□□□□□ -0.64
PIK3C2A-203ENST00000531428 F8VRH5 84 aa11.06□□□□□ -0.64
PIK3C2A-203ENST00000531428 GYPEP15421 78 aa11.06□□□□□ -0.64
PIK3C2A-203ENST00000531428 SPATA45Q537H7 98 aa11.06□□□□□ -0.64
PIK3C2A-203ENST00000531428 NTM-AS1Q6ZSK4 140 aa11.06□□□□□ -0.64
PIK3C2A-203ENST00000531428 CST9LQ9H4G1 147 aa11.06□□□□□ -0.64
PIK3C2A-203ENST00000531428 HUWE1Q7Z6Z7 4374 aaKnown RBP11.06□□□□□ -0.64
PIK3C2A-203ENST00000531428 PCP4L1A6NKN8 68 aa11.05□□□□□ -0.64
PIK3C2A-203ENST00000531428 H7C423 109 aa11.05□□□□□ -0.64
PIK3C2A-203ENST00000531428 IGKCP01834 107 aa11.05□□□□□ -0.64
PIK3C2A-203ENST00000531428 C12orf74Q32Q52 190 aa11.05□□□□□ -0.64
PIK3C2A-203ENST00000531428 MRPL35Q9NZE8 188 aaKnown RBP11.05□□□□□ -0.64
PIK3C2A-203ENST00000531428 CHTOPQ9Y3Y2 248 aaKnown RBP11.05□□□□□ -0.64
PIK3C2A-203ENST00000531428 C3orf84H3BNL1 204 aa11.04□□□□□ -0.64
PIK3C2A-203ENST00000531428 ATP6V0E2Q8NHE4 81 aa11.04□□□□□ -0.64
PIK3C2A-203ENST00000531428 MUC7Q8TAX7 377 aa11.04□□□□□ -0.64
PIK3C2A-203ENST00000531428 PRO1933Q9H354 126 aa11.04□□□□□ -0.64
PIK3C2A-203ENST00000531428 UBE2D4Q9Y2X8 147 aa11.04□□□□□ -0.64
PIK3C2A-203ENST00000531428 CSDC2Q9Y534 153 aaKnown RBP11.04□□□□□ -0.64
PIK3C2A-203ENST00000531428 TENM3Q9P273 2699 aa11.04□□□□□ -0.64
PIK3C2A-203ENST00000531428 IGLV4-3A0A075B6K6 122 aa11.03□□□□□ -0.64
PIK3C2A-203ENST00000531428 F5H768 121 aa11.03□□□□□ -0.64
PIK3C2A-203ENST00000531428 MRPS36P82909 103 aaKnown RBP11.03□□□□□ -0.64
PIK3C2A-203ENST00000531428 MAJINQ3KP22 176 aa11.03□□□□□ -0.64
PIK3C2A-203ENST00000531428 SH2D6Q7Z4S9 175 aa11.03□□□□□ -0.64
PIK3C2A-203ENST00000531428 MRPL52Q86TS9 123 aaKnown RBP11.03□□□□□ -0.64
PIK3C2A-203ENST00000531428 VSIG2Q96IQ7 327 aa11.03□□□□□ -0.64
PIK3C2A-203ENST00000531428 TMEM243Q9BU79 118 aa11.03□□□□□ -0.64
PIK3C2A-203ENST00000531428 VCX2Q9H322 139 aa11.03□□□□□ -0.64
PIK3C2A-203ENST00000531428 TRBV25-1A0A075B6N4 114 aa11.03□□□□□ -0.64
PIK3C2A-203ENST00000531428 TRAV26-1A0A087WT03 109 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms