RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 RNF185Q96GF1 192 aa10.08□□□□□ -0.8
CHMP4A-204ENST00000530996 A0A1B0GUV1 79 aa10.07□□□□□ -0.8
CHMP4A-204ENST00000530996 GAGE12HA6NDE8 117 aa10.07□□□□□ -0.8
CHMP4A-204ENST00000530996 PGLYRP4Q96LB8 373 aa10.07□□□□□ -0.8
CHMP4A-204ENST00000530996 NIT2Q9NQR4 276 aa10.07□□□□□ -0.8
CHMP4A-204ENST00000530996 RAB19A4D1S5 217 aa10.06□□□□□ -0.8
CHMP4A-204ENST00000530996 F2Z2F3 143 aa10.06□□□□□ -0.8
CHMP4A-204ENST00000530996 TEX46H3BTG2 121 aa10.06□□□□□ -0.8
CHMP4A-204ENST00000530996 HIGD2BQ4VC39 106 aa10.06□□□□□ -0.8
CHMP4A-204ENST00000530996 LYZL1Q6UWQ5 148 aa10.06□□□□□ -0.8
CHMP4A-204ENST00000530996 IGKV2-24A0A0C4DH68 120 aa10.05□□□□□ -0.8
CHMP4A-204ENST00000530996 C19orf71A6NCJ1 209 aa10.05□□□□□ -0.8
CHMP4A-204ENST00000530996 PHOX2AO14813 284 aa10.05□□□□□ -0.8
CHMP4A-204ENST00000530996 MT1HL1P0DM35 61 aa10.05□□□□□ -0.8
CHMP4A-204ENST00000530996 CCL20P78556 96 aa10.05□□□□□ -0.8
CHMP4A-204ENST00000530996 AMMECR1LQ6DCA0 310 aa10.05□□□□□ -0.8
CHMP4A-204ENST00000530996 CFAP161Q6P656 301 aa10.05□□□□□ -0.8
CHMP4A-204ENST00000530996 HMSDA8MTL9 139 aa10.04□□□□□ -0.8
CHMP4A-204ENST00000530996 NTF3P20783 257 aa10.04□□□□□ -0.8
CHMP4A-204ENST00000530996 TWIST1Q15672 202 aa10.04□□□□□ -0.8
CHMP4A-204ENST00000530996 MAJINQ3KP22 176 aa10.04□□□□□ -0.8
CHMP4A-204ENST00000530996 SMIM12Q96EX1 92 aa10.04□□□□□ -0.8
CHMP4A-204ENST00000530996 BIN3Q9NQY0 253 aa10.04□□□□□ -0.8
CHMP4A-204ENST00000530996 TRAV26-2A0A0B4J265 109 aa10.03□□□□□ -0.8
CHMP4A-204ENST00000530996 PDE6DO43924 150 aa10.03□□□□□ -0.8
CHMP4A-204ENST00000530996 SLPIP03973 132 aa10.03□□□□□ -0.8
CHMP4A-204ENST00000530996 MEF2BQ02080 365 aaPredicted RBP10.03□□□□□ -0.8
CHMP4A-204ENST00000530996 RNASEKQ6P5S7 137 aaKnown RBP10.03□□□□□ -0.8
CHMP4A-204ENST00000530996 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
CHMP4A-204ENST00000530996 GTSF1Q8WW33 167 aa10.03□□□□□ -0.8
CHMP4A-204ENST00000530996 MED9Q9NWA0 146 aa10.03□□□□□ -0.8
CHMP4A-204ENST00000530996 RPS10P46783 165 aaKnown RBP10.02□□□□□ -0.81
CHMP4A-204ENST00000530996 COX6A2Q02221 97 aa10.02□□□□□ -0.81
CHMP4A-204ENST00000530996 PLAC8Q9NZF1 115 aa10.02□□□□□ -0.81
CHMP4A-204ENST00000530996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.01□□□□□ -0.81
CHMP4A-204ENST00000530996 IGKV2-29A2NJV5 120 aaPredicted RBP10.01□□□□□ -0.81
CHMP4A-204ENST00000530996 NDUFS6O75380 124 aaKnown RBP10.01□□□□□ -0.81
CHMP4A-204ENST00000530996 CTRLP40313 264 aa10.01□□□□□ -0.81
CHMP4A-204ENST00000530996 EIF5AL1Q6IS14 154 aaKnown RBP10.01□□□□□ -0.81
CHMP4A-204ENST00000530996 CHCHD10Q8WYQ3 142 aaPredicted RBP10.01□□□□□ -0.81
CHMP4A-204ENST00000530996 TRBV20OR9-2A0A075B6H5 130 aa10□□□□□ -0.81
CHMP4A-204ENST00000530996 TRAV1-1A0A0B4J248 108 aa10□□□□□ -0.81
CHMP4A-204ENST00000530996 APCSP02743 223 aa10□□□□□ -0.81
CHMP4A-204ENST00000530996 SMIM15Q7Z3B0 74 aa10□□□□□ -0.81
CHMP4A-204ENST00000530996 LYPD6BQ8NI32 183 aa10□□□□□ -0.81
CHMP4A-204ENST00000530996 BCL2P10415 239 aa9.99□□□□□ -0.81
CHMP4A-204ENST00000530996 Q6ZNX1 250 aa9.99□□□□□ -0.81
CHMP4A-204ENST00000530996 STPG4Q8N801 248 aa9.99□□□□□ -0.81
CHMP4A-204ENST00000530996 GATD1Q8NB37 220 aa9.99□□□□□ -0.81
CHMP4A-204ENST00000530996 PRSS3P2Q8NHM4 247 aa9.99□□□□□ -0.81
CHMP4A-204ENST00000530996 RPP21Q9H633 154 aaKnown RBP9.99□□□□□ -0.81
CHMP4A-204ENST00000530996 PRR3P79522 188 aaKnown RBP9.98□□□□□ -0.81
CHMP4A-204ENST00000530996 C9orf62Q8N4C0 152 aa9.98□□□□□ -0.81
CHMP4A-204ENST00000530996 NUDT10Q8NFP7 164 aa9.98□□□□□ -0.81
CHMP4A-204ENST00000530996 RPL39LQ96EH5 51 aaKnown RBP9.98□□□□□ -0.81
CHMP4A-204ENST00000530996 NUDT11Q96G61 164 aa9.98□□□□□ -0.81
CHMP4A-204ENST00000530996 RNASE7Q9H1E1 156 aaKnown RBP9.97□□□□□ -0.81
CHMP4A-204ENST00000530996 GVQW2A0A096LPI5 108 aaPredicted RBP9.96□□□□□ -0.82
CHMP4A-204ENST00000530996 NCR2O95944 276 aa9.96□□□□□ -0.82
CHMP4A-204ENST00000530996 FGF6P10767 208 aa9.96□□□□□ -0.82
CHMP4A-204ENST00000530996 XCL1P47992 114 aa9.96□□□□□ -0.82
CHMP4A-204ENST00000530996 TMEM101Q96IK0 257 aa9.96□□□□□ -0.82
CHMP4A-204ENST00000530996 BTF3L4Q96K17 158 aa9.96□□□□□ -0.82
CHMP4A-204ENST00000530996 PKIGQ9Y2B9 76 aa9.96□□□□□ -0.82
CHMP4A-204ENST00000530996 A0A096LNI7 61 aa9.95□□□□□ -0.82
CHMP4A-204ENST00000530996 SDHAF1A6NFY7 115 aa9.95□□□□□ -0.82
CHMP4A-204ENST00000530996 CNFNQ9BYD5 112 aa9.95□□□□□ -0.82
CHMP4A-204ENST00000530996 LINC00474Q9P2X8 69 aa9.94□□□□□ -0.82
CHMP4A-204ENST00000530996 H7C423 109 aa9.93□□□□□ -0.82
CHMP4A-204ENST00000530996 K7EN84 100 aa9.93□□□□□ -0.82
CHMP4A-204ENST00000530996 CCL25O15444 150 aa9.93□□□□□ -0.82
CHMP4A-204ENST00000530996 ZNF25P17030 456 aaPredicted RBP9.93□□□□□ -0.82
CHMP4A-204ENST00000530996 PMCHP20382 165 aa9.93□□□□□ -0.82
CHMP4A-204ENST00000530996 FOXI1Q12951 378 aa9.93□□□□□ -0.82
CHMP4A-204ENST00000530996 TEX261Q6UWH6 196 aa9.93□□□□□ -0.82
CHMP4A-204ENST00000530996 CARD19Q96LW7 228 aa9.93□□□□□ -0.82
CHMP4A-204ENST00000530996 TAGLN2P37802 199 aaKnown RBP9.92□□□□□ -0.82
CHMP4A-204ENST00000530996 FOXA3P55318 350 aaPredicted RBP9.92□□□□□ -0.82
CHMP4A-204ENST00000530996 OR5A1Q8NGJ0 315 aa9.92□□□□□ -0.82
CHMP4A-204ENST00000530996 LINC00526Q96FQ7 95 aa9.92□□□□□ -0.82
CHMP4A-204ENST00000530996 I3L3M4 83 aa9.91□□□□□ -0.82
CHMP4A-204ENST00000530996 BORCS7Q96B45 105 aa9.91□□□□□ -0.82
CHMP4A-204ENST00000530996 LINC01600Q96MT4 127 aa9.91□□□□□ -0.82
CHMP4A-204ENST00000530996 TMEM242Q9NWH2 141 aa9.91□□□□□ -0.82
CHMP4A-204ENST00000530996 IGHV1-58A0A0C4DH39 117 aa9.9□□□□□ -0.82
CHMP4A-204ENST00000530996 GATCO43716 136 aaKnown RBP9.9□□□□□ -0.82
CHMP4A-204ENST00000530996 CEBPGP53567 150 aa9.9□□□□□ -0.82
CHMP4A-204ENST00000530996 ODF1Q14990 250 aa9.9□□□□□ -0.82
CHMP4A-204ENST00000530996 REG3GQ6UW15 175 aa9.9□□□□□ -0.82
CHMP4A-204ENST00000530996 OCC1Q8TAD7 63 aa9.9□□□□□ -0.82
CHMP4A-204ENST00000530996 MRAP2Q96G30 205 aa9.9□□□□□ -0.82
CHMP4A-204ENST00000530996 LINC00959A0A1B0GUT2 108 aa9.89□□□□□ -0.83
CHMP4A-204ENST00000530996 ZNF561-AS1K7EIQ3 104 aa9.89□□□□□ -0.83
CHMP4A-204ENST00000530996 SS18Q15532 418 aa9.89□□□□□ -0.83
CHMP4A-204ENST00000530996 ST20Q9HBF5 79 aa9.89□□□□□ -0.83
CHMP4A-204ENST00000530996 A8MWL6 223 aa9.87□□□□□ -0.83
CHMP4A-204ENST00000530996 MALP21145 153 aa9.87□□□□□ -0.83
CHMP4A-204ENST00000530996 SYCNQ0VAF6 134 aa9.87□□□□□ -0.83
CHMP4A-204ENST00000530996 SPINK6Q6UWN8 80 aa9.87□□□□□ -0.83
CHMP4A-204ENST00000530996 SLC51BQ86UW2 128 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms