RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 DNAJC30Q96LL9 226 aa12.56□□□□□ -0.4
GMDS-208ENST00000530927 TMEM191AQ9H0A3 160 aa12.56□□□□□ -0.4
GMDS-208ENST00000530927 HERC2O95714 4834 aa12.56□□□□□ -0.4
GMDS-208ENST00000530927 RASL11AQ6T310 242 aa12.55□□□□□ -0.4
GMDS-208ENST00000530927 DEFB104AQ8WTQ1 72 aa12.55□□□□□ -0.4
GMDS-208ENST00000530927 C16orf90A8MZG2 172 aa12.54□□□□□ -0.4
GMDS-208ENST00000530927 K7EP13 123 aa12.54□□□□□ -0.4
GMDS-208ENST00000530927 NFE4Q86UQ8 179 aa12.54□□□□□ -0.4
GMDS-208ENST00000530927 NIT1Q86X76 327 aa12.54□□□□□ -0.4
GMDS-208ENST00000530927 TRAV26-2A0A0B4J265 109 aa12.54□□□□□ -0.4
GMDS-208ENST00000530927 NTM-AS1Q6ZSK4 140 aa12.54□□□□□ -0.4
GMDS-208ENST00000530927 GATD1Q8NB37 220 aa12.54□□□□□ -0.4
GMDS-208ENST00000530927 C12orf57Q99622 126 aa12.54□□□□□ -0.4
GMDS-208ENST00000530927 HIST1H2BKO60814 126 aa12.53□□□□□ -0.4
GMDS-208ENST00000530927 HIST1H2BJP06899 126 aa12.53□□□□□ -0.4
GMDS-208ENST00000530927 HIST1H2BOP23527 126 aa12.53□□□□□ -0.4
GMDS-208ENST00000530927 HIST1H2BBP33778 126 aa12.53□□□□□ -0.4
GMDS-208ENST00000530927 HIST1H2BDP58876 126 aa12.53□□□□□ -0.4
GMDS-208ENST00000530927 HIST1H2BCP62807 126 aa12.53□□□□□ -0.4
GMDS-208ENST00000530927 HIST2H2BEQ16778 126 aa12.53□□□□□ -0.4
GMDS-208ENST00000530927 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.53□□□□□ -0.4
GMDS-208ENST00000530927 HIST1H2BHQ93079 126 aa12.53□□□□□ -0.4
GMDS-208ENST00000530927 HIST1H2BNQ99877 126 aa12.53□□□□□ -0.4
GMDS-208ENST00000530927 HIST1H2BMQ99879 126 aa12.53□□□□□ -0.4
GMDS-208ENST00000530927 A0A087WTM6 91 aa12.52□□□□□ -0.41
GMDS-208ENST00000530927 TRBV6-8A0A0A6YYG3 113 aa12.52□□□□□ -0.41
GMDS-208ENST00000530927 PHOX2AO14813 284 aa12.52□□□□□ -0.41
GMDS-208ENST00000530927 TRGC2P03986 189 aa12.51□□□□□ -0.41
GMDS-208ENST00000530927 COX19Q49B96 90 aa12.51□□□□□ -0.41
GMDS-208ENST00000530927 COA6Q5JTJ3 125 aaKnown RBP12.5□□□□□ -0.41
GMDS-208ENST00000530927 FAM104BQ5XKR9 115 aa12.5□□□□□ -0.41
GMDS-208ENST00000530927 AMN1Q8IY45 258 aa12.5□□□□□ -0.41
GMDS-208ENST00000530927 FRZBQ92765 325 aa12.5□□□□□ -0.41
GMDS-208ENST00000530927 APOBP04114 4563 aaKnown RBP12.5□□□□□ -0.41
GMDS-208ENST00000530927 HSPG2P98160 4391 aa12.5□□□□□ -0.41
GMDS-208ENST00000530927 RAB4AP20338 218 aa12.49□□□□□ -0.41
GMDS-208ENST00000530927 KLK12Q9UKR0 248 aa12.49□□□□□ -0.41
GMDS-208ENST00000530927 TMEM262E9PQX1 116 aa12.48□□□□□ -0.41
GMDS-208ENST00000530927 H7C1H1 209 aa12.48□□□□□ -0.41
GMDS-208ENST00000530927 MPV17L2Q567V2 206 aa12.48□□□□□ -0.41
GMDS-208ENST00000530927 RPL39LQ96EH5 51 aaKnown RBP12.48□□□□□ -0.41
GMDS-208ENST00000530927 RNF185Q96GF1 192 aa12.48□□□□□ -0.41
GMDS-208ENST00000530927 GNB1LQ9BYB4 327 aa12.48□□□□□ -0.41
GMDS-208ENST00000530927 LRCOL1A6NCL2 159 aa12.47□□□□□ -0.41
GMDS-208ENST00000530927 PSCAO43653 123 aa12.47□□□□□ -0.41
GMDS-208ENST00000530927 GAS8-AS1O95177 125 aa12.47□□□□□ -0.41
GMDS-208ENST00000530927 S100A2P29034 98 aa12.47□□□□□ -0.41
GMDS-208ENST00000530927 NDUFA6P56556 154 aa12.47□□□□□ -0.41
GMDS-208ENST00000530927 WFDC2Q14508 124 aa12.47□□□□□ -0.41
GMDS-208ENST00000530927 LAGE3Q14657 143 aa12.47□□□□□ -0.41
GMDS-208ENST00000530927 TMEM136Q6ZRR5 245 aa12.47□□□□□ -0.41
GMDS-208ENST00000530927 CHCHD5Q9BSY4 110 aa12.47□□□□□ -0.41
GMDS-208ENST00000530927 A0A087WX48 190 aa12.46□□□□□ -0.41
GMDS-208ENST00000530927 GAGE6Q13070 117 aa12.46□□□□□ -0.41
GMDS-208ENST00000530927 Q8N976 141 aa12.46□□□□□ -0.41
GMDS-208ENST00000530927 MRAP2Q96G30 205 aa12.46□□□□□ -0.41
GMDS-208ENST00000530927 NIT2Q9NQR4 276 aa12.46□□□□□ -0.41
GMDS-208ENST00000530927 HLA-DQA1P01909 254 aa12.45□□□□□ -0.42
GMDS-208ENST00000530927 MT-ND6P03923 174 aa12.45□□□□□ -0.42
GMDS-208ENST00000530927 MRPL51Q4U2R6 128 aaKnown RBP12.45□□□□□ -0.42
GMDS-208ENST00000530927 MAPKAPK5-AS1Q8N8E1 139 aa12.45□□□□□ -0.42
GMDS-208ENST00000530927 UBE2WQ96B02 151 aa12.45□□□□□ -0.42
GMDS-208ENST00000530927 KRTAP17-1Q9BYP8 105 aa12.45□□□□□ -0.42
GMDS-208ENST00000530927 RYR1P21817 5038 aa12.44□□□□□ -0.42
GMDS-208ENST00000530927 LECT2O14960 151 aa12.44□□□□□ -0.42
GMDS-208ENST00000530927 HIST3H2BBQ8N257 126 aa12.44□□□□□ -0.42
GMDS-208ENST00000530927 EREGO14944 169 aa12.43□□□□□ -0.42
GMDS-208ENST00000530927 APCSP02743 223 aa12.43□□□□□ -0.42
GMDS-208ENST00000530927 PPBPP02775 128 aa12.43□□□□□ -0.42
GMDS-208ENST00000530927 CKS2P33552 79 aa12.43□□□□□ -0.42
GMDS-208ENST00000530927 TRBV25-1A0A075B6N4 114 aa12.42□□□□□ -0.42
GMDS-208ENST00000530927 TRAV8-3A0A0A6YYJ7 113 aa12.42□□□□□ -0.42
GMDS-208ENST00000530927 PPP1R17O96001 155 aa12.42□□□□□ -0.42
GMDS-208ENST00000530927 IQCJQ1A5X6 159 aa12.42□□□□□ -0.42
GMDS-208ENST00000530927 CLPSL2Q6UWE3 100 aa12.42□□□□□ -0.42
GMDS-208ENST00000530927 ENHOQ6UWT2 76 aa12.42□□□□□ -0.42
GMDS-208ENST00000530927 IGKV2D-24A0A075B6R9 120 aa12.41□□□□□ -0.42
GMDS-208ENST00000530927 IGHV1-24A0A0C4DH33 117 aa12.41□□□□□ -0.42
GMDS-208ENST00000530927 ANGP03950 147 aaKnown RBP12.41□□□□□ -0.42
GMDS-208ENST00000530927 CHCHD7Q9BUK0 85 aa12.41□□□□□ -0.42
GMDS-208ENST00000530927 MRPL18Q9H0U6 180 aaKnown RBP12.41□□□□□ -0.42
GMDS-208ENST00000530927 TRAPPC1Q9Y5R8 145 aa12.41□□□□□ -0.42
GMDS-208ENST00000530927 D6R8Y8 96 aa12.4□□□□□ -0.42
GMDS-208ENST00000530927 SMKR1H3BMG3 65 aa12.4□□□□□ -0.42
GMDS-208ENST00000530927 RBX1P62877 108 aa12.4□□□□□ -0.42
GMDS-208ENST00000530927 TMEM97Q5BJF2 176 aa12.4□□□□□ -0.42
GMDS-208ENST00000530927 ORMDL3Q8N138 153 aa12.4□□□□□ -0.42
GMDS-208ENST00000530927 BAALCQ8WXS3 180 aa12.4□□□□□ -0.42
GMDS-208ENST00000530927 IFITM10A6NMD0 228 aa12.39□□□□□ -0.43
GMDS-208ENST00000530927 NCR2O95944 276 aa12.39□□□□□ -0.43
GMDS-208ENST00000530927 Q8N814 137 aa12.39□□□□□ -0.43
GMDS-208ENST00000530927 TM2D2Q9BX73 214 aa12.39□□□□□ -0.43
GMDS-208ENST00000530927 PGPEP1Q9NXJ5 209 aa12.39□□□□□ -0.43
GMDS-208ENST00000530927 TRBV6-5A0A0K0K1A5 114 aa12.38□□□□□ -0.43
GMDS-208ENST00000530927 KRTAP10-1P60331 282 aa12.38□□□□□ -0.43
GMDS-208ENST00000530927 NRACQ8N912 160 aa12.38□□□□□ -0.43
GMDS-208ENST00000530927 TMEM243Q9BU79 118 aa12.38□□□□□ -0.43
GMDS-208ENST00000530927 PRELID3AQ96N28 172 aa12.37□□□□□ -0.43
GMDS-208ENST00000530927 ST20Q9HBF5 79 aa12.37□□□□□ -0.43
GMDS-208ENST00000530927 LAMTOR2Q9Y2Q5 125 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms