RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 COL4A1P02462 1669 aa9.81□□□□□ -0.84
PDE4DIP-227ENST00000529945 NRXN2Q9P2S2 1712 aa9.8□□□□□ -0.84
PDE4DIP-227ENST00000529945 COL5A1P20908 1838 aaPredicted RBP9.8□□□□□ -0.84
PDE4DIP-227ENST00000529945 FNDC1Q4ZHG4 1894 aaPredicted RBP9.8□□□□□ -0.84
PDE4DIP-227ENST00000529945 IGKV1-17P01599 117 aa9.8□□□□□ -0.84
PDE4DIP-227ENST00000529945 E9PLN8 166 aa9.8□□□□□ -0.84
PDE4DIP-227ENST00000529945 CFAP126Q5VTH2 177 aa9.8□□□□□ -0.84
PDE4DIP-227ENST00000529945 ZNF833PQ6ZTB9 187 aa9.8□□□□□ -0.84
PDE4DIP-227ENST00000529945 NUPR1O60356 82 aa9.79□□□□□ -0.84
PDE4DIP-227ENST00000529945 MAPK1IP1LQ8NDC0 245 aa9.79□□□□□ -0.84
PDE4DIP-227ENST00000529945 SIP14410 1827 aa9.79□□□□□ -0.84
PDE4DIP-227ENST00000529945 DEFB136Q30KP8 78 aa9.79□□□□□ -0.84
PDE4DIP-227ENST00000529945 C14orf177Q52M58 125 aa9.79□□□□□ -0.84
PDE4DIP-227ENST00000529945 CXCL6P80162 114 aa9.79□□□□□ -0.84
PDE4DIP-227ENST00000529945 LY6DQ14210 128 aa9.79□□□□□ -0.84
PDE4DIP-227ENST00000529945 TRAV7A0A075B6U4 112 aa9.79□□□□□ -0.84
PDE4DIP-227ENST00000529945 CCL24O00175 119 aa9.79□□□□□ -0.84
PDE4DIP-227ENST00000529945 TRIAP1O43715 76 aa9.79□□□□□ -0.84
PDE4DIP-227ENST00000529945 CRIPAKQ8N1N5 446 aa9.79□□□□□ -0.84
PDE4DIP-227ENST00000529945 ESRGQ1W209 222 aa9.79□□□□□ -0.84
PDE4DIP-227ENST00000529945 MSMBP08118 114 aa9.78□□□□□ -0.84
PDE4DIP-227ENST00000529945 RNASE3P12724 160 aaKnown RBP9.78□□□□□ -0.84
PDE4DIP-227ENST00000529945 COL8A2P25067 703 aa9.78□□□□□ -0.84
PDE4DIP-227ENST00000529945 Q6ZS49 121 aa9.78□□□□□ -0.84
PDE4DIP-227ENST00000529945 DCANP1Q8TF63 244 aa9.78□□□□□ -0.84
PDE4DIP-227ENST00000529945 RNF223E7ERA6 249 aa9.78□□□□□ -0.84
PDE4DIP-227ENST00000529945 MRPS12O15235 138 aaKnown RBP9.78□□□□□ -0.84
PDE4DIP-227ENST00000529945 LOC107984640A0A0U1RRK4 108 aa9.78□□□□□ -0.84
PDE4DIP-227ENST00000529945 VPREB3Q9UKI3 123 aa9.78□□□□□ -0.84
PDE4DIP-227ENST00000529945 C5orf56Q8N8D9 126 aa9.77□□□□□ -0.84
PDE4DIP-227ENST00000529945 LENEPQ9Y5L5 61 aa9.77□□□□□ -0.85
PDE4DIP-227ENST00000529945 THSD7AQ9UPZ6 1657 aa9.77□□□□□ -0.85
PDE4DIP-227ENST00000529945 HIVEP3Q5T1R4 2406 aa9.77□□□□□ -0.85
PDE4DIP-227ENST00000529945 UFSP1Q6NVU6 142 aa9.77□□□□□ -0.85
PDE4DIP-227ENST00000529945 NRACQ8N912 160 aa9.77□□□□□ -0.85
PDE4DIP-227ENST00000529945 BRWD3Q6RI45 1802 aa9.76□□□□□ -0.85
PDE4DIP-227ENST00000529945 LINC00269Q8N2A0 174 aa9.76□□□□□ -0.85
PDE4DIP-227ENST00000529945 A0A0J9YXY3 114 aa9.76□□□□□ -0.85
PDE4DIP-227ENST00000529945 FHL1Q13642 323 aa9.76□□□□□ -0.85
PDE4DIP-227ENST00000529945 LINC00208Q96KT6 92 aa9.76□□□□□ -0.85
PDE4DIP-227ENST00000529945 C2orf70A6NJV1 201 aa9.76□□□□□ -0.85
PDE4DIP-227ENST00000529945 COL11A2P13942 1736 aaPredicted RBP9.75□□□□□ -0.85
PDE4DIP-227ENST00000529945 C5orf67F2Z3F1 127 aa9.75□□□□□ -0.85
PDE4DIP-227ENST00000529945 MDFIQ99750 246 aa9.75□□□□□ -0.85
PDE4DIP-227ENST00000529945 SPRY4Q9C004 299 aa9.75□□□□□ -0.85
PDE4DIP-227ENST00000529945 TPSG1Q9NRR2 321 aa9.75□□□□□ -0.85
PDE4DIP-227ENST00000529945 NHSL1Q5SYE7 1610 aa9.75□□□□□ -0.85
PDE4DIP-227ENST00000529945 WT1-ASQ06250 92 aa9.75□□□□□ -0.85
PDE4DIP-227ENST00000529945 MYO9AB2RTY4 2548 aa9.74□□□□□ -0.85
PDE4DIP-227ENST00000529945 IGLV9-49A0A0B4J1Y8 123 aa9.74□□□□□ -0.85
PDE4DIP-227ENST00000529945 KIAA1671Q9BY89 1806 aa9.74□□□□□ -0.85
PDE4DIP-227ENST00000529945 A0A0G2JNJ9 132 aa9.73□□□□□ -0.85
PDE4DIP-227ENST00000529945 C8orf87E5RJ46 101 aa9.73□□□□□ -0.85
PDE4DIP-227ENST00000529945 PRLHP81277 87 aa9.73□□□□□ -0.85
PDE4DIP-227ENST00000529945 Q9UFV3 132 aa9.73□□□□□ -0.85
PDE4DIP-227ENST00000529945 ZNF706Q9Y5V0 76 aaPredicted RBP9.73□□□□□ -0.85
PDE4DIP-227ENST00000529945 ZNF73O43830 326 aaPredicted RBP9.73□□□□□ -0.85
PDE4DIP-227ENST00000529945 MDFICQ9P1T7 246 aa9.73□□□□□ -0.85
PDE4DIP-227ENST00000529945 MYO18BQ8IUG5 2567 aa9.73□□□□□ -0.85
PDE4DIP-227ENST00000529945 RETNLBQ9BQ08 111 aa9.73□□□□□ -0.85
PDE4DIP-227ENST00000529945 MSRB1Q9NZV6 116 aa9.73□□□□□ -0.85
PDE4DIP-227ENST00000529945 TRBV6-5A0A0K0K1A5 114 aa9.73□□□□□ -0.85
PDE4DIP-227ENST00000529945 IGKV2-28A0A075B6P5 120 aa9.72□□□□□ -0.85
PDE4DIP-227ENST00000529945 IGKV2D-28P01615 120 aa9.72□□□□□ -0.85
PDE4DIP-227ENST00000529945 KLK5Q9Y337 293 aaPredicted RBP9.72□□□□□ -0.85
PDE4DIP-227ENST00000529945 IGHV7-81A0A0B4J1V7 117 aa9.72□□□□□ -0.85
PDE4DIP-227ENST00000529945 Q96MF0 132 aa9.72□□□□□ -0.85
PDE4DIP-227ENST00000529945 RBX1P62877 108 aa9.72□□□□□ -0.85
PDE4DIP-227ENST00000529945 IGLV3-32A0A0A0MS00 114 aa9.71□□□□□ -0.85
PDE4DIP-227ENST00000529945 C2CD3Q4AC94 2353 aa9.71□□□□□ -0.85
PDE4DIP-227ENST00000529945 TRBV7-7A0A0K0K1E9 115 aa9.71□□□□□ -0.85
PDE4DIP-227ENST00000529945 C9orf66Q5T8R8 295 aa9.71□□□□□ -0.85
PDE4DIP-227ENST00000529945 Q6ZR03 302 aa9.71□□□□□ -0.86
PDE4DIP-227ENST00000529945 LIMD2Q9BT23 127 aa9.71□□□□□ -0.86
PDE4DIP-227ENST00000529945 PPDPFQ9H3Y8 114 aa9.71□□□□□ -0.86
PDE4DIP-227ENST00000529945 A6NDX4 124 aa9.71□□□□□ -0.86
PDE4DIP-227ENST00000529945 DEFB4AO15263 64 aa9.7□□□□□ -0.86
PDE4DIP-227ENST00000529945 CD59P13987 128 aa9.7□□□□□ -0.86
PDE4DIP-227ENST00000529945 TRBV10-1A0A0K0K1A3 114 aa9.7□□□□□ -0.86
PDE4DIP-227ENST00000529945 PRORYQ9H606 182 aa9.7□□□□□ -0.86
PDE4DIP-227ENST00000529945 TRBV30A0A0K0K1B3 111 aa9.7□□□□□ -0.86
PDE4DIP-227ENST00000529945 GP9P14770 177 aa9.7□□□□□ -0.86
PDE4DIP-227ENST00000529945 SLURP1P55000 103 aa9.7□□□□□ -0.86
PDE4DIP-227ENST00000529945 LMO1P25800 156 aa9.7□□□□□ -0.86
PDE4DIP-227ENST00000529945 ZNF524Q96C55 264 aa9.7□□□□□ -0.86
PDE4DIP-227ENST00000529945 ZFAND2AQ8N6M9 145 aa9.69□□□□□ -0.86
PDE4DIP-227ENST00000529945 C7orf33Q8WU49 177 aa9.69□□□□□ -0.86
PDE4DIP-227ENST00000529945 CEMP1Q6PRD7 247 aaPredicted RBP9.69□□□□□ -0.86
PDE4DIP-227ENST00000529945 PIEZO1Q92508 2521 aa9.69□□□□□ -0.86
PDE4DIP-227ENST00000529945 XGP55808 180 aa9.69□□□□□ -0.86
PDE4DIP-227ENST00000529945 PINLYPA6NC86 204 aa9.69□□□□□ -0.86
PDE4DIP-227ENST00000529945 PCOTHQ58A44 107 aa9.69□□□□□ -0.86
PDE4DIP-227ENST00000529945 C10orf25Q5T742 122 aa9.68□□□□□ -0.86
PDE4DIP-227ENST00000529945 NRGNQ92686 78 aa9.68□□□□□ -0.86
PDE4DIP-227ENST00000529945 TMEM89A2RUT3 159 aa9.68□□□□□ -0.86
PDE4DIP-227ENST00000529945 PATE2Q6UY27 113 aa9.67□□□□□ -0.86
PDE4DIP-227ENST00000529945 LINC01547P58512 204 aaPredicted RBP9.67□□□□□ -0.86
PDE4DIP-227ENST00000529945 A0A1B0GU69 56 aa9.67□□□□□ -0.86
PDE4DIP-227ENST00000529945 REG3AQ06141 175 aa9.67□□□□□ -0.86
PDE4DIP-227ENST00000529945 FLVCR1-AS1Q8TAF5 88 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms