RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 KIF25-AS1Q9Y6Z4 181 aa10.67□□□□□ -0.7
NR1H3-231ENST00000529540 IGLV4-69A0A075B6H9 119 aa10.66□□□□□ -0.7
NR1H3-231ENST00000529540 A0A0J9YX75 114 aa10.66□□□□□ -0.7
NR1H3-231ENST00000529540 APOMO95445 188 aa10.66□□□□□ -0.7
NR1H3-231ENST00000529540 TSPAN13O95857 204 aa10.66□□□□□ -0.7
NR1H3-231ENST00000529540 CRYGDP07320 174 aa10.66□□□□□ -0.7
NR1H3-231ENST00000529540 RNASE3P12724 160 aaKnown RBP10.66□□□□□ -0.7
NR1H3-231ENST00000529540 TMEM141Q96I45 108 aa10.66□□□□□ -0.7
NR1H3-231ENST00000529540 CLUHP3Q96NS8 147 aa10.66□□□□□ -0.7
NR1H3-231ENST00000529540 MRPL16Q9NX20 251 aaKnown RBP10.66□□□□□ -0.7
NR1H3-231ENST00000529540 CD7P09564 240 aa10.66□□□□□ -0.7
NR1H3-231ENST00000529540 SMCPP49901 116 aaPredicted RBP10.66□□□□□ -0.7
NR1H3-231ENST00000529540 LINC00315P59091 139 aa10.66□□□□□ -0.7
NR1H3-231ENST00000529540 FOXI1Q12951 378 aa10.66□□□□□ -0.7
NR1H3-231ENST00000529540 STHQ8IWL8 128 aa10.66□□□□□ -0.7
NR1H3-231ENST00000529540 ODF3Q96PU9 254 aa10.66□□□□□ -0.7
NR1H3-231ENST00000529540 IGIPA6NJ69 53 aa10.65□□□□□ -0.7
NR1H3-231ENST00000529540 SCGB1D4Q6XE38 83 aa10.65□□□□□ -0.7
NR1H3-231ENST00000529540 TIMM17AQ99595 171 aa10.65□□□□□ -0.7
NR1H3-231ENST00000529540 VWFP04275 2813 aa10.65□□□□□ -0.71
NR1H3-231ENST00000529540 A0A0J9YY99 117 aa10.64□□□□□ -0.71
NR1H3-231ENST00000529540 C11orf86A6NJI1 115 aa10.64□□□□□ -0.71
NR1H3-231ENST00000529540 TSHBP01222 138 aa10.64□□□□□ -0.71
NR1H3-231ENST00000529540 POLR2KP53803 58 aaKnown RBP10.64□□□□□ -0.71
NR1H3-231ENST00000529540 PMVKQ15126 192 aa10.64□□□□□ -0.71
NR1H3-231ENST00000529540 C19orf73Q9NVV2 129 aa10.64□□□□□ -0.71
NR1H3-231ENST00000529540 H3BMM0 161 aa10.63□□□□□ -0.71
NR1H3-231ENST00000529540 J3KRW8 73 aa10.63□□□□□ -0.71
NR1H3-231ENST00000529540 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
NR1H3-231ENST00000529540 SRSF9Q13242 221 aaKnown RBP eCLIP10.63□□□□□ -0.71
NR1H3-231ENST00000529540 SBSPONQ8IVN8 264 aa10.63□□□□□ -0.71
NR1H3-231ENST00000529540 TRRAPQ9Y4A5 3859 aa10.63□□□□□ -0.71
NR1H3-231ENST00000529540 A8MTW9 85 aa10.63□□□□□ -0.71
NR1H3-231ENST00000529540 F6UB75 175 aa10.63□□□□□ -0.71
NR1H3-231ENST00000529540 GNRH2O43555 120 aa10.63□□□□□ -0.71
NR1H3-231ENST00000529540 KPRPQ5T749 579 aaPredicted RBP10.63□□□□□ -0.71
NR1H3-231ENST00000529540 ZFP2Q6ZN57 461 aa10.63□□□□□ -0.71
NR1H3-231ENST00000529540 MTURNQ8N3F0 131 aa10.63□□□□□ -0.71
NR1H3-231ENST00000529540 VCX2Q9H322 139 aa10.63□□□□□ -0.71
NR1H3-231ENST00000529540 TP53TG1Q9Y2A0 90 aa10.63□□□□□ -0.71
NR1H3-231ENST00000529540 TRBV20-1A0A075B6N2 111 aa10.62□□□□□ -0.71
NR1H3-231ENST00000529540 TRBV6-5A0A0K0K1A5 114 aa10.62□□□□□ -0.71
NR1H3-231ENST00000529540 KLLNB2CW77 178 aa10.62□□□□□ -0.71
NR1H3-231ENST00000529540 VCYO14598 125 aa10.62□□□□□ -0.71
NR1H3-231ENST00000529540 SPRY2O43597 315 aa10.62□□□□□ -0.71
NR1H3-231ENST00000529540 KNCNA6PVL3 124 aa10.61□□□□□ -0.71
NR1H3-231ENST00000529540 PPDPFLQ8WWR9 84 aa10.61□□□□□ -0.71
NR1H3-231ENST00000529540 CDIP1Q9H305 208 aa10.61□□□□□ -0.71
NR1H3-231ENST00000529540 IGHV3-30P01768 117 aa10.6□□□□□ -0.71
NR1H3-231ENST00000529540 IGHV3-30-5P0DP03 117 aa10.6□□□□□ -0.71
NR1H3-231ENST00000529540 PSMB2P49721 201 aa10.6□□□□□ -0.71
NR1H3-231ENST00000529540 SUMO4Q6EEV6 95 aa10.6□□□□□ -0.71
NR1H3-231ENST00000529540 TRPT1Q86TN4 253 aaKnown RBP10.6□□□□□ -0.71
NR1H3-231ENST00000529540 Q8N1Y9 231 aa10.6□□□□□ -0.71
NR1H3-231ENST00000529540 SLC25A29Q8N8R3 303 aa10.6□□□□□ -0.71
NR1H3-231ENST00000529540 NOTCH3Q9UM47 2321 aa10.6□□□□□ -0.71
NR1H3-231ENST00000529540 SORL1Q92673 2214 aa10.6□□□□□ -0.71
NR1H3-231ENST00000529540 KRTAP10-11P60412 298 aa10.6□□□□□ -0.71
NR1H3-231ENST00000529540 ZNF876PQ49A33 203 aa10.6□□□□□ -0.71
NR1H3-231ENST00000529540 KIR2DL4Q99706 377 aa10.6□□□□□ -0.71
NR1H3-231ENST00000529540 AGRNO00468 2067 aa10.59□□□□□ -0.71
NR1H3-231ENST00000529540 A8MZ25 164 aa10.59□□□□□ -0.71
NR1H3-231ENST00000529540 M0QXV9 152 aa10.59□□□□□ -0.71
NR1H3-231ENST00000529540 NFE4Q86UQ8 179 aa10.59□□□□□ -0.71
NR1H3-231ENST00000529540 TEN1Q86WV5 123 aa10.59□□□□□ -0.71
NR1H3-231ENST00000529540 SYT8Q8NBV8 401 aa10.59□□□□□ -0.71
NR1H3-231ENST00000529540 AMELXQ99217 191 aa10.59□□□□□ -0.71
NR1H3-231ENST00000529540 LOC107984156A0A0G2JMH3 177 aa10.58□□□□□ -0.72
NR1H3-231ENST00000529540 TRBV27A0A0K0K1C4 114 aa10.58□□□□□ -0.72
NR1H3-231ENST00000529540 CRYBA4P53673 196 aa10.58□□□□□ -0.72
NR1H3-231ENST00000529540 TSPEAR-AS2P59090 65 aa10.58□□□□□ -0.72
NR1H3-231ENST00000529540 DEFB1P60022 68 aa10.58□□□□□ -0.72
NR1H3-231ENST00000529540 RHOHQ15669 191 aa10.58□□□□□ -0.72
NR1H3-231ENST00000529540 ARL17AQ8IVW1 177 aa10.58□□□□□ -0.72
NR1H3-231ENST00000529540 C10orf126Q8N4M7 172 aa10.58□□□□□ -0.72
NR1H3-231ENST00000529540 CFC1BP0CG36 223 aa10.57□□□□□ -0.72
NR1H3-231ENST00000529540 CFC1P0CG37 223 aa10.57□□□□□ -0.72
NR1H3-231ENST00000529540 APOC4P55056 127 aa10.57□□□□□ -0.72
NR1H3-231ENST00000529540 CKS1BP61024 79 aa10.57□□□□□ -0.72
NR1H3-231ENST00000529540 KIR2DL5BQ8NHK3 375 aa10.57□□□□□ -0.72
NR1H3-231ENST00000529540 WFDC10AQ9H1F0 79 aa10.57□□□□□ -0.72
NR1H3-231ENST00000529540 TCL1BO95988 128 aa10.57□□□□□ -0.72
NR1H3-231ENST00000529540 IGKV3-20P01619 116 aa10.57□□□□□ -0.72
NR1H3-231ENST00000529540 FAM159AQ6UWV7 190 aa10.57□□□□□ -0.72
NR1H3-231ENST00000529540 CARD19Q96LW7 228 aa10.57□□□□□ -0.72
NR1H3-231ENST00000529540 A8MWV9 139 aa10.56□□□□□ -0.72
NR1H3-231ENST00000529540 LEPROTO15243 131 aa10.56□□□□□ -0.72
NR1H3-231ENST00000529540 IGHV4-30-4P0DP06 118 aa10.56□□□□□ -0.72
NR1H3-231ENST00000529540 ZNRF2Q8NHG8 242 aa10.56□□□□□ -0.72
NR1H3-231ENST00000529540 C9orf85Q96MD7 179 aa10.56□□□□□ -0.72
NR1H3-231ENST00000529540 SDHAF1A6NFY7 115 aa10.55□□□□□ -0.72
NR1H3-231ENST00000529540 J3QQQ9 107 aa10.55□□□□□ -0.72
NR1H3-231ENST00000529540 RPL39P62891 51 aaKnown RBP10.55□□□□□ -0.72
NR1H3-231ENST00000529540 SPINK13Q1W4C9 94 aa10.55□□□□□ -0.72
NR1H3-231ENST00000529540 PRO1854Q9UHT4 67 aa10.55□□□□□ -0.72
NR1H3-231ENST00000529540 INSP01308 110 aa10.54□□□□□ -0.72
NR1H3-231ENST00000529540 LGALS3P17931 250 aaKnown RBP10.54□□□□□ -0.72
NR1H3-231ENST00000529540 TMEM170BQ5T4T1 132 aa10.54□□□□□ -0.72
NR1H3-231ENST00000529540 Q6ZUT4 128 aa10.54□□□□□ -0.72
NR1H3-231ENST00000529540 A0A0B4J2C4 111 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms