RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 GFRA4Q9GZZ7 299 aa11.45□□□□□ -0.58
TSPAN4-214ENST00000525201 DNAH5Q8TE73 4624 aa11.45□□□□□ -0.58
TSPAN4-214ENST00000525201 TRAV8-4A0A0B4J246 113 aa11.44□□□□□ -0.58
TSPAN4-214ENST00000525201 A0A1B0GUV1 79 aa11.44□□□□□ -0.58
TSPAN4-214ENST00000525201 TMEM218A2RU14 115 aa11.44□□□□□ -0.58
TSPAN4-214ENST00000525201 FAM231BA6NCW3 169 aa11.44□□□□□ -0.58
TSPAN4-214ENST00000525201 LINC00269Q8N2A0 174 aa11.44□□□□□ -0.58
TSPAN4-214ENST00000525201 GTSF1Q8WW33 167 aa11.44□□□□□ -0.58
TSPAN4-214ENST00000525201 APOBP04114 4563 aaKnown RBP11.43□□□□□ -0.58
TSPAN4-214ENST00000525201 NCR2O95944 276 aa11.43□□□□□ -0.58
TSPAN4-214ENST00000525201 FOXA3P55318 350 aaPredicted RBP11.43□□□□□ -0.58
TSPAN4-214ENST00000525201 REG3AQ06141 175 aa11.43□□□□□ -0.58
TSPAN4-214ENST00000525201 LINC01551Q86U37 167 aa11.43□□□□□ -0.58
TSPAN4-214ENST00000525201 NDUFA5Q16718 116 aa11.42□□□□□ -0.58
TSPAN4-214ENST00000525201 Q6ZSA8 131 aa11.42□□□□□ -0.58
TSPAN4-214ENST00000525201 SLC7A5P1Q8MH63 180 aa11.42□□□□□ -0.58
TSPAN4-214ENST00000525201 GATD1Q8NB37 220 aa11.42□□□□□ -0.58
TSPAN4-214ENST00000525201 TSKUQ8WUA8 353 aa11.42□□□□□ -0.58
TSPAN4-214ENST00000525201 OSTCQ9NRP0 149 aa11.42□□□□□ -0.58
TSPAN4-214ENST00000525201 A0A1B0GUT8 65 aa11.41□□□□□ -0.58
TSPAN4-214ENST00000525201 ADCYAP1P18509 176 aa11.41□□□□□ -0.58
TSPAN4-214ENST00000525201 TMEM241Q24JQ0 296 aa11.41□□□□□ -0.58
TSPAN4-214ENST00000525201 CLPSL2Q6UWE3 100 aa11.41□□□□□ -0.58
TSPAN4-214ENST00000525201 NAT8Q9UHE5 227 aa11.41□□□□□ -0.58
TSPAN4-214ENST00000525201 USP17L23D6RBM5 183 aa11.4□□□□□ -0.58
TSPAN4-214ENST00000525201 H7C423 109 aa11.4□□□□□ -0.58
TSPAN4-214ENST00000525201 INAFM2P0DMQ5 153 aa11.4□□□□□ -0.58
TSPAN4-214ENST00000525201 TRAV26-2A0A0B4J265 109 aa11.39□□□□□ -0.59
TSPAN4-214ENST00000525201 HIGD1CA8MV81 97 aa11.39□□□□□ -0.59
TSPAN4-214ENST00000525201 APCSP02743 223 aa11.39□□□□□ -0.59
TSPAN4-214ENST00000525201 SMR3BP02814 79 aaPredicted RBP11.39□□□□□ -0.59
TSPAN4-214ENST00000525201 RPL23P62829 140 aaKnown RBP11.39□□□□□ -0.59
TSPAN4-214ENST00000525201 C10orf91Q5T1B1 145 aa11.39□□□□□ -0.59
TSPAN4-214ENST00000525201 DGAT2L7PQ6IED9 249 aa11.39□□□□□ -0.59
TSPAN4-214ENST00000525201 CLRN3Q8NCR9 226 aa11.39□□□□□ -0.59
TSPAN4-214ENST00000525201 SEC11CQ9BY50 192 aa11.39□□□□□ -0.59
TSPAN4-214ENST00000525201 F8W036 122 aa11.38□□□□□ -0.59
TSPAN4-214ENST00000525201 PLA2G1BP04054 148 aaKnown RBP11.38□□□□□ -0.59
TSPAN4-214ENST00000525201 AMMECR1LQ6DCA0 310 aa11.38□□□□□ -0.59
TSPAN4-214ENST00000525201 SDHAF1A6NFY7 115 aa11.37□□□□□ -0.59
TSPAN4-214ENST00000525201 RIGQ13278 110 aa11.37□□□□□ -0.59
TSPAN4-214ENST00000525201 C20orf203Q8NBC4 194 aa11.37□□□□□ -0.59
TSPAN4-214ENST00000525201 TMEM191AQ9H0A3 160 aa11.37□□□□□ -0.59
TSPAN4-214ENST00000525201 FAM30AQ9NZY2 134 aa11.37□□□□□ -0.59
TSPAN4-214ENST00000525201 TRBV6-5A0A0K0K1A5 114 aa11.36□□□□□ -0.59
TSPAN4-214ENST00000525201 I3L3M4 83 aa11.36□□□□□ -0.59
TSPAN4-214ENST00000525201 PPP1R17O96001 155 aa11.36□□□□□ -0.59
TSPAN4-214ENST00000525201 HAMPP81172 84 aa11.36□□□□□ -0.59
TSPAN4-214ENST00000525201 ISOC2Q96AB3 205 aa11.36□□□□□ -0.59
TSPAN4-214ENST00000525201 RPL39LQ96EH5 51 aaKnown RBP11.36□□□□□ -0.59
TSPAN4-214ENST00000525201 MRAP2Q96G30 205 aa11.36□□□□□ -0.59
TSPAN4-214ENST00000525201 ZNF25P17030 456 aaPredicted RBP11.35□□□□□ -0.59
TSPAN4-214ENST00000525201 PMCHP20382 165 aa11.35□□□□□ -0.59
TSPAN4-214ENST00000525201 ADIRFQ15847 76 aa11.35□□□□□ -0.59
TSPAN4-214ENST00000525201 BTF3L4Q96K17 158 aa11.35□□□□□ -0.59
TSPAN4-214ENST00000525201 ST20Q9HBF5 79 aa11.35□□□□□ -0.59
TSPAN4-214ENST00000525201 NAT8BQ9UHF3 227 aa11.35□□□□□ -0.59
TSPAN4-214ENST00000525201 CARHSP1Q9Y2V2 147 aaKnown RBP11.35□□□□□ -0.59
TSPAN4-214ENST00000525201 IGLV4-60A0A075B6I1 120 aa11.34□□□□□ -0.59
TSPAN4-214ENST00000525201 IGLV10-54A0A075B6I4 117 aa11.34□□□□□ -0.59
TSPAN4-214ENST00000525201 PNRC1Q12796 327 aaPredicted RBP11.34□□□□□ -0.59
TSPAN4-214ENST00000525201 TMEM101Q96IK0 257 aa11.34□□□□□ -0.59
TSPAN4-214ENST00000525201 CHAC1Q9BUX1 264 aa11.34□□□□□ -0.59
TSPAN4-214ENST00000525201 AP5S1Q9NUS5 200 aa11.34□□□□□ -0.59
TSPAN4-214ENST00000525201 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.33□□□□□ -0.6
TSPAN4-214ENST00000525201 RNASEKQ6P5S7 137 aaKnown RBP11.33□□□□□ -0.6
TSPAN4-214ENST00000525201 CFAP161Q6P656 301 aa11.33□□□□□ -0.6
TSPAN4-214ENST00000525201 V9GYV3 84 aa11.33□□□□□ -0.6
TSPAN4-214ENST00000525201 A0A1B0GW15 77 aa11.32□□□□□ -0.6
TSPAN4-214ENST00000525201 PRSS1P07477 247 aa11.32□□□□□ -0.6
TSPAN4-214ENST00000525201 SMAGPQ0VAQ4 97 aa11.32□□□□□ -0.6
TSPAN4-214ENST00000525201 LINC01620Q4KN68 170 aa11.32□□□□□ -0.6
TSPAN4-214ENST00000525201 KRTAP26-1Q6PEX3 210 aa11.32□□□□□ -0.6
TSPAN4-214ENST00000525201 SCXQ7RTU7 201 aa11.32□□□□□ -0.6
TSPAN4-214ENST00000525201 LINC00528Q8N1L1 170 aa11.32□□□□□ -0.6
TSPAN4-214ENST00000525201 hDV102S1A0JD36 115 aa11.3□□□□□ -0.6
TSPAN4-214ENST00000525201 S100A8P05109 93 aa11.3□□□□□ -0.6
TSPAN4-214ENST00000525201 FGF6P10767 208 aa11.3□□□□□ -0.6
TSPAN4-214ENST00000525201 RAB4AP20338 218 aa11.3□□□□□ -0.6
TSPAN4-214ENST00000525201 C9orf163Q8N9P6 203 aa11.3□□□□□ -0.6
TSPAN4-214ENST00000525201 NUP35Q8NFH5 326 aa11.3□□□□□ -0.6
TSPAN4-214ENST00000525201 DEFB104AQ8WTQ1 72 aa11.3□□□□□ -0.6
TSPAN4-214ENST00000525201 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.29□□□□□ -0.6
TSPAN4-214ENST00000525201 IGKV2-29A2NJV5 120 aaPredicted RBP11.29□□□□□ -0.6
TSPAN4-214ENST00000525201 PPP1R2P9O14990 202 aa11.29□□□□□ -0.6
TSPAN4-214ENST00000525201 CNBPP62633 177 aaKnown RBP11.29□□□□□ -0.6
TSPAN4-214ENST00000525201 HERC1Q15751 4861 aa11.28□□□□□ -0.6
TSPAN4-214ENST00000525201 TRBV27A0A0K0K1C4 114 aa11.28□□□□□ -0.6
TSPAN4-214ENST00000525201 APOC3P02656 99 aa11.28□□□□□ -0.6
TSPAN4-214ENST00000525201 FCER1GP30273 86 aa11.28□□□□□ -0.6
TSPAN4-214ENST00000525201 AMN1Q8IY45 258 aa11.28□□□□□ -0.6
TSPAN4-214ENST00000525201 OR5A1Q8NGJ0 315 aa11.28□□□□□ -0.6
TSPAN4-214ENST00000525201 KIR2DL4Q99706 377 aa11.28□□□□□ -0.6
TSPAN4-214ENST00000525201 IGKV3OR2-268A0A0C4DH90 116 aa11.27□□□□□ -0.61
TSPAN4-214ENST00000525201 SMIM27A0A1W2PRY6 76 aa11.27□□□□□ -0.61
TSPAN4-214ENST00000525201 C7orf77A4D0Y5 90 aa11.27□□□□□ -0.61
TSPAN4-214ENST00000525201 VCYO14598 125 aa11.27□□□□□ -0.61
TSPAN4-214ENST00000525201 ANAPC16Q96DE5 110 aa11.27□□□□□ -0.61
TSPAN4-214ENST00000525201 RNF185Q96GF1 192 aa11.27□□□□□ -0.61
TSPAN4-214ENST00000525201 TMEM242Q9NWH2 141 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms