RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PHLDA3Q9Y5J5 127 aa3.59□□□□□ -1.83
NEDD8-203ENST00000524927 TRBV7-3A0A075B6L6 115 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 TRBV10-1A0A0K0K1A3 114 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 LOC100506127A0A0U1RQW1 187 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 C3orf85A0A1B0GTC6 90 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 RBAKDNA6NC62 111 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 A6NDN8 102 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 PDCD5O14737 125 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 PMP2P02689 132 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 KRTAP10-10P60014 251 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 AKR1C1Q04828 323 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 LINC00483Q53H64 154 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 AHSA2Q719I0 299 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 LINC00305Q7Z4B0 112 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 CAMK2N2Q96S95 79 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 ARL6Q9H0F7 186 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 COMMD3Q9UBI1 195 aa3.58□□□□□ -1.84
NEDD8-203ENST00000524927 IGKV2-40A0A087WW87 121 aaPredicted RBP3.57□□□□□ -1.84
NEDD8-203ENST00000524927 IGKV2D-40P01614 121 aaPredicted RBP3.57□□□□□ -1.84
NEDD8-203ENST00000524927 RAB4AP20338 218 aa3.57□□□□□ -1.84
NEDD8-203ENST00000524927 SYCNQ0VAF6 134 aa3.57□□□□□ -1.84
NEDD8-203ENST00000524927 C15orf40Q8WUR7 153 aa3.57□□□□□ -1.84
NEDD8-203ENST00000524927 IGKV2D-26A0A0A0MRZ7 120 aa3.56□□□□□ -1.84
NEDD8-203ENST00000524927 GYG2O15488 501 aa3.56□□□□□ -1.84
NEDD8-203ENST00000524927 HSBP1O75506 76 aa3.56□□□□□ -1.84
NEDD8-203ENST00000524927 CDS2O95674 445 aa3.56□□□□□ -1.84
NEDD8-203ENST00000524927 TRAM1Q15629 374 aa3.56□□□□□ -1.84
NEDD8-203ENST00000524927 TMEM97Q5BJF2 176 aa3.56□□□□□ -1.84
NEDD8-203ENST00000524927 LHFPL1Q86WI0 220 aa3.56□□□□□ -1.84
NEDD8-203ENST00000524927 ASB13Q8WXK3 278 aa3.56□□□□□ -1.84
NEDD8-203ENST00000524927 IFT46Q9NQC8 304 aa3.56□□□□□ -1.84
NEDD8-203ENST00000524927 MCUBQ9NWR8 336 aa3.56□□□□□ -1.84
NEDD8-203ENST00000524927 NDUFA12Q9UI09 145 aa3.56□□□□□ -1.84
NEDD8-203ENST00000524927 LENEPQ9Y5L5 61 aa3.56□□□□□ -1.84
NEDD8-203ENST00000524927 IGLV4-60A0A075B6I1 120 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 TRBV19A0A075B6N1 114 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 IGKV2-28A0A075B6P5 120 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 TRAV1-2A0A0B4J238 106 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 TRAV21A0A0B4J279 112 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 LOC100130705A0A1B0GUX0 176 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 TMEM223A0PJW6 202 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 IGKV2D-28P01615 120 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 UBE2BP63146 152 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 PDE6HQ13956 83 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 NTM-AS1Q6ZSK4 140 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 KRTAP5-5Q701N2 237 aaPredicted RBP3.55□□□□□ -1.84
NEDD8-203ENST00000524927 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.55□□□□□ -1.84
NEDD8-203ENST00000524927 LINC00526Q96FQ7 95 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 SLIRPQ9GZT3 109 aaKnown RBP3.55□□□□□ -1.84
NEDD8-203ENST00000524927 CYTL1Q9NRR1 136 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 ANAPC10Q9UM13 185 aa3.55□□□□□ -1.84
NEDD8-203ENST00000524927 A0A0A6YYH2 397 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 DUXBA0A1W2PPF3 345 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 A6NJ64 397 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 APOMO95445 188 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 APCSP02743 223 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 SULT1A3P0DMM9 295 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 SULT1A4P0DMN0 295 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 BCL2P10415 239 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 RCVRNP35243 200 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 BCAP31P51572 246 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 S100A10P60903 97 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 GCSAMLQ5JQS6 135 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 ISOC2Q96AB3 205 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 DUSP21Q9H596 190 aa3.54□□□□□ -1.84
NEDD8-203ENST00000524927 SMIM26A0A096LP01 95 aa3.53□□□□□ -1.84
NEDD8-203ENST00000524927 COX7A2P2O60397 106 aa3.53□□□□□ -1.84
NEDD8-203ENST00000524927 RAB5AP20339 215 aa3.53□□□□□ -1.84
NEDD8-203ENST00000524927 MYL9P24844 172 aa3.53□□□□□ -1.84
NEDD8-203ENST00000524927 RPL28P46779 137 aaKnown RBP3.53□□□□□ -1.84
NEDD8-203ENST00000524927 SULT1A2P50226 295 aa3.53□□□□□ -1.84
NEDD8-203ENST00000524927 EXOC3-AS1Q8N2X6 119 aa3.53□□□□□ -1.84
NEDD8-203ENST00000524927 MITD1Q8WV92 249 aa3.53□□□□□ -1.84
NEDD8-203ENST00000524927 NPVFQ9HCQ7 196 aa3.53□□□□□ -1.84
NEDD8-203ENST00000524927 FKBP14Q9NWM8 211 aa3.53□□□□□ -1.84
NEDD8-203ENST00000524927 RHBDL2Q9NX52 303 aa3.53□□□□□ -1.84
NEDD8-203ENST00000524927 PAIP2BQ9ULR5 123 aaKnown RBP3.53□□□□□ -1.84
NEDD8-203ENST00000524927 POMPQ9Y244 141 aa3.53□□□□□ -1.84
NEDD8-203ENST00000524927 AP4S1Q9Y587 144 aa3.53□□□□□ -1.84
NEDD8-203ENST00000524927 TRBV25-1A0A075B6N4 114 aa3.52□□□□□ -1.85
NEDD8-203ENST00000524927 IGHV1-58A0A0C4DH39 117 aa3.52□□□□□ -1.85
NEDD8-203ENST00000524927 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.52□□□□□ -1.85
NEDD8-203ENST00000524927 NUPR1O60356 82 aa3.52□□□□□ -1.85
NEDD8-203ENST00000524927 PFN2P35080 140 aa3.52□□□□□ -1.85
NEDD8-203ENST00000524927 RPL23P62829 140 aaKnown RBP3.52□□□□□ -1.85
NEDD8-203ENST00000524927 MEF2BQ02080 365 aaPredicted RBP3.52□□□□□ -1.85
NEDD8-203ENST00000524927 LGALSLQ3ZCW2 172 aaPredicted RBP3.52□□□□□ -1.85
NEDD8-203ENST00000524927 SELENOHQ8IZQ5 122 aaKnown RBP3.52□□□□□ -1.85
NEDD8-203ENST00000524927 MND1Q9BWT6 205 aa3.52□□□□□ -1.85
NEDD8-203ENST00000524927 TIMM9Q9Y5J7 89 aa3.52□□□□□ -1.85
NEDD8-203ENST00000524927 AKR1C4P17516 323 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 SPRR2EP22531 72 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 SPRR2BP35325 72 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 SPRR2AP35326 72 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 FABP5Q01469 135 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 IQCJQ1A5X6 159 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 C10orf113Q5VZT2 155 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 FAM19A2Q8N3H0 131 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 TERB2Q8NHR7 220 aa3.51□□□□□ -1.85
NEDD8-203ENST00000524927 DIRAS2Q96HU8 199 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms