RNA–Protein interactions for RNA: ENST00000524846.5

GSDMD-202, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 3,462 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-202ENST00000524846 CHCHD5Q9BSY4 110 aa11.3□□□□□ -0.6
GSDMD-202ENST00000524846 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.3□□□□□ -0.6
GSDMD-202ENST00000524846 IGKV2-29A2NJV5 120 aaPredicted RBP11.3□□□□□ -0.6
GSDMD-202ENST00000524846 RPL13AP40429 203 aaKnown RBP11.3□□□□□ -0.6
GSDMD-202ENST00000524846 SNRPD3P62318 126 aaKnown RBP11.3□□□□□ -0.6
GSDMD-202ENST00000524846 USMG5Q96IX5 58 aa11.3□□□□□ -0.6
GSDMD-202ENST00000524846 PIEZO1Q92508 2521 aa11.29□□□□□ -0.6
GSDMD-202ENST00000524846 H7C423 109 aa11.29□□□□□ -0.6
GSDMD-202ENST00000524846 RHOHQ15669 191 aa11.29□□□□□ -0.6
GSDMD-202ENST00000524846 DGAT2L7PQ6IED9 249 aa11.29□□□□□ -0.6
GSDMD-202ENST00000524846 FAM19A4Q96LR4 140 aa11.29□□□□□ -0.6
GSDMD-202ENST00000524846 PRRC2AP48634 2157 aaKnown RBP11.29□□□□□ -0.6
GSDMD-202ENST00000524846 IGHV1-69P01742 117 aa11.29□□□□□ -0.6
GSDMD-202ENST00000524846 FBXL19-AS1Q494R0 122 aa11.29□□□□□ -0.6
GSDMD-202ENST00000524846 HERV-K104P63124 156 aa11.29□□□□□ -0.6
GSDMD-202ENST00000524846 C10orf99Q6UWK7 81 aa11.29□□□□□ -0.6
GSDMD-202ENST00000524846 RPL32P62910 135 aaKnown RBP11.28□□□□□ -0.6
GSDMD-202ENST00000524846 Q9UF83 564 aa11.28□□□□□ -0.6
GSDMD-202ENST00000524846 NXPH4O95158 308 aa11.28□□□□□ -0.6
GSDMD-202ENST00000524846 KLRB1Q12918 225 aa11.28□□□□□ -0.6
GSDMD-202ENST00000524846 LRRK2Q5S007 2527 aa11.27□□□□□ -0.61
GSDMD-202ENST00000524846 TRBV6-5A0A0K0K1A5 114 aa11.27□□□□□ -0.61
GSDMD-202ENST00000524846 NSUN5P1Q3KNT7 163 aa11.27□□□□□ -0.61
GSDMD-202ENST00000524846 TRBV30A0A0K0K1B3 111 aa11.26□□□□□ -0.61
GSDMD-202ENST00000524846 SYNJ2BPP57105 145 aa11.26□□□□□ -0.61
GSDMD-202ENST00000524846 ZFHX3Q15911 3703 aa11.26□□□□□ -0.61
GSDMD-202ENST00000524846 TRGV11A0A075B6L2 103 aa11.26□□□□□ -0.61
GSDMD-202ENST00000524846 DCANP1Q8TF63 244 aa11.26□□□□□ -0.61
GSDMD-202ENST00000524846 ABCA12Q86UK0 2595 aa11.26□□□□□ -0.61
GSDMD-202ENST00000524846 POM121L12Q8N7R1 296 aa11.25□□□□□ -0.61
GSDMD-202ENST00000524846 NAV2Q8IVL1 2488 aa11.25□□□□□ -0.61
GSDMD-202ENST00000524846 TRBV7-9A0A0J9YWB2 115 aa11.25□□□□□ -0.61
GSDMD-202ENST00000524846 IGHV1-58A0A0C4DH39 117 aa11.24□□□□□ -0.61
GSDMD-202ENST00000524846 APRG1Q8IVJ8 170 aa11.24□□□□□ -0.61
GSDMD-202ENST00000524846 C9orf85Q96MD7 179 aa11.24□□□□□ -0.61
GSDMD-202ENST00000524846 IGHV4-61A0A0C4DH41 118 aa11.23□□□□□ -0.61
GSDMD-202ENST00000524846 A0A0J9YX75 114 aa11.23□□□□□ -0.61
GSDMD-202ENST00000524846 CUBNO60494 3623 aa11.23□□□□□ -0.61
GSDMD-202ENST00000524846 IGHG2P01859 326 aa11.23□□□□□ -0.61
GSDMD-202ENST00000524846 KHDC1LQ5JSQ8 128 aa11.23□□□□□ -0.61
GSDMD-202ENST00000524846 IGHV3OR16-12A0A075B7B8 117 aa11.22□□□□□ -0.61
GSDMD-202ENST00000524846 MIAQ16674 131 aa11.22□□□□□ -0.61
GSDMD-202ENST00000524846 KLK9Q2XQG4 91 aa11.22□□□□□ -0.61
GSDMD-202ENST00000524846 SHISA2Q6UWI4 295 aa11.22□□□□□ -0.61
GSDMD-202ENST00000524846 CDKN2A-AS1Q9UH64 79 aa11.21□□□□□ -0.61
GSDMD-202ENST00000524846 CIRBPQ14011 172 aaKnown RBP11.21□□□□□ -0.62
GSDMD-202ENST00000524846 VSIG2Q96IQ7 327 aa11.21□□□□□ -0.62
GSDMD-202ENST00000524846 FAM236AA0A1B0GUQ0 79 aa11.21□□□□□ -0.62
GSDMD-202ENST00000524846 FAM236BA0A1B0GV22 79 aa11.21□□□□□ -0.62
GSDMD-202ENST00000524846 C19orf54Q5BKX5 351 aa11.2□□□□□ -0.62
GSDMD-202ENST00000524846 LITAFQ99732 161 aa11.2□□□□□ -0.62
GSDMD-202ENST00000524846 ATP5J2P56134 94 aa11.2□□□□□ -0.62
GSDMD-202ENST00000524846 TRAV13-1A0A0B4J241 112 aa11.19□□□□□ -0.62
GSDMD-202ENST00000524846 RS1O15537 224 aa11.19□□□□□ -0.62
GSDMD-202ENST00000524846 YAE1D1Q9NRH1 226 aa11.19□□□□□ -0.62
GSDMD-202ENST00000524846 H3BT86 120 aa11.19□□□□□ -0.62
GSDMD-202ENST00000524846 DEFB131AP59861 70 aa11.19□□□□□ -0.62
GSDMD-202ENST00000524846 TMEM61Q8N0U2 210 aa11.19□□□□□ -0.62
GSDMD-202ENST00000524846 Q9H8V8 135 aa11.19□□□□□ -0.62
GSDMD-202ENST00000524846 JMJD1CQ15652 2540 aa11.19□□□□□ -0.62
GSDMD-202ENST00000524846 NOTCH2Q04721 2471 aa11.19□□□□□ -0.62
GSDMD-202ENST00000524846 MAPK1IP1LQ8NDC0 245 aa11.18□□□□□ -0.62
GSDMD-202ENST00000524846 LINC00467Q9BRT7 94 aa11.18□□□□□ -0.62
GSDMD-202ENST00000524846 LST1O00453 97 aa11.18□□□□□ -0.62
GSDMD-202ENST00000524846 MRPS36P82909 103 aaKnown RBP11.18□□□□□ -0.62
GSDMD-202ENST00000524846 Q6ZSN1 163 aa11.18□□□□□ -0.62
GSDMD-202ENST00000524846 PKD1L2Q7Z442 2459 aa11.17□□□□□ -0.62
GSDMD-202ENST00000524846 TMEM101Q96IK0 257 aa11.17□□□□□ -0.62
GSDMD-202ENST00000524846 LINC01587Q99440 93 aa11.17□□□□□ -0.62
GSDMD-202ENST00000524846 ABCA2Q9BZC7 2435 aa11.17□□□□□ -0.62
GSDMD-202ENST00000524846 IGKV3OR2-268A0A0C4DH90 116 aa11.16□□□□□ -0.62
GSDMD-202ENST00000524846 M0QXV9 152 aa11.16□□□□□ -0.62
GSDMD-202ENST00000524846 A6NDX4 124 aa11.16□□□□□ -0.62
GSDMD-202ENST00000524846 HOXD3P31249 432 aaPredicted RBP11.16□□□□□ -0.62
GSDMD-202ENST00000524846 C19orf84I3L1E1 186 aa11.15□□□□□ -0.62
GSDMD-202ENST00000524846 NDUFA7O95182 113 aa11.15□□□□□ -0.62
GSDMD-202ENST00000524846 GNLYP22749 145 aa11.15□□□□□ -0.62
GSDMD-202ENST00000524846 HIST2H2BDQ6DRA6 164 aa11.15□□□□□ -0.62
GSDMD-202ENST00000524846 IGHV3-53P01767 116 aa11.15□□□□□ -0.62
GSDMD-202ENST00000524846 IGHV4-59P01825 116 aa11.15□□□□□ -0.62
GSDMD-202ENST00000524846 Q6Q795 121 aa11.15□□□□□ -0.62
GSDMD-202ENST00000524846 PIMREGQ9BSJ6 248 aa11.15□□□□□ -0.62
GSDMD-202ENST00000524846 K7EQG2 157 aa11.15□□□□□ -0.63
GSDMD-202ENST00000524846 RBMY1A1P0DJD3 496 aaKnown RBP11.15□□□□□ -0.63
GSDMD-202ENST00000524846 RBMY1CP0DJD4 496 aa11.15□□□□□ -0.63
GSDMD-202ENST00000524846 RBMY1FQ15415 496 aaKnown RBP11.15□□□□□ -0.63
GSDMD-202ENST00000524846 DEFB136Q30KP8 78 aa11.15□□□□□ -0.63
GSDMD-202ENST00000524846 PRIMA1Q86XR5 153 aa11.15□□□□□ -0.63
GSDMD-202ENST00000524846 H3BUA1 57 aa11.14□□□□□ -0.63
GSDMD-202ENST00000524846 K7EMT4 169 aa11.14□□□□□ -0.63
GSDMD-202ENST00000524846 SPANXDQ9BXN6 97 aa11.14□□□□□ -0.63
GSDMD-202ENST00000524846 SPANXCQ9NY87 97 aa11.14□□□□□ -0.63
GSDMD-202ENST00000524846 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
GSDMD-202ENST00000524846 MTORP42345 2549 aa11.13□□□□□ -0.63
GSDMD-202ENST00000524846 TINCRA0A1B0GVN0 87 aa11.13□□□□□ -0.63
GSDMD-202ENST00000524846 IGLV1-40P01703 118 aa11.13□□□□□ -0.63
GSDMD-202ENST00000524846 Q9HAA7 133 aa11.13□□□□□ -0.63
GSDMD-202ENST00000524846 UBE2D4Q9Y2X8 147 aa11.13□□□□□ -0.63
GSDMD-202ENST00000524846 NBL1P41271 181 aa11.13□□□□□ -0.63
GSDMD-202ENST00000524846 C9orf153Q5TBE3 101 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms