RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 IGHV3-73A0A0B4J1V6 119 aa10.03□□□□□ -0.8
LDLRAD3-202ENST00000524419 RRN3P1Q2M238 152 aa10.03□□□□□ -0.8
LDLRAD3-202ENST00000524419 KRTAP21-3Q3LHN1 58 aa10.03□□□□□ -0.8
LDLRAD3-202ENST00000524419 C11orf72Q8NBR9 251 aa10.03□□□□□ -0.8
LDLRAD3-202ENST00000524419 NACAE9PAV3 2078 aa10.02□□□□□ -0.8
LDLRAD3-202ENST00000524419 CMC4P56277 68 aaPredicted RBP10.02□□□□□ -0.81
LDLRAD3-202ENST00000524419 C21orf62-AS1Q17RA5 79 aa10.02□□□□□ -0.81
LDLRAD3-202ENST00000524419 SCGB1D4Q6XE38 83 aa10.02□□□□□ -0.81
LDLRAD3-202ENST00000524419 XCL2Q9UBD3 114 aa10.02□□□□□ -0.81
LDLRAD3-202ENST00000524419 MTORP42345 2549 aa10.02□□□□□ -0.81
LDLRAD3-202ENST00000524419 TMEM238LA0A1B0GVL6 79 aa10.01□□□□□ -0.81
LDLRAD3-202ENST00000524419 A6NJY4 79 aa10.01□□□□□ -0.81
LDLRAD3-202ENST00000524419 RHODO00212 210 aa10.01□□□□□ -0.81
LDLRAD3-202ENST00000524419 CFAP126Q5VTH2 177 aa10.01□□□□□ -0.81
LDLRAD3-202ENST00000524419 MRPL16Q9NX20 251 aaKnown RBP10.01□□□□□ -0.81
LDLRAD3-202ENST00000524419 F8W1H4 67 aa10□□□□□ -0.81
LDLRAD3-202ENST00000524419 C20orf203Q8NBC4 194 aa10□□□□□ -0.81
LDLRAD3-202ENST00000524419 PLEKHB2Q96CS7 222 aa10□□□□□ -0.81
LDLRAD3-202ENST00000524419 TNFRSF18Q9Y5U5 241 aa10□□□□□ -0.81
LDLRAD3-202ENST00000524419 P0DMU3 169 aa9.99□□□□□ -0.81
LDLRAD3-202ENST00000524419 FAM231AP0DMU4 169 aa9.99□□□□□ -0.81
LDLRAD3-202ENST00000524419 FAM231CP0DMU5 169 aa9.99□□□□□ -0.81
LDLRAD3-202ENST00000524419 PROK1P58294 105 aa9.99□□□□□ -0.81
LDLRAD3-202ENST00000524419 BEAN1Q3B7T3 259 aa9.99□□□□□ -0.81
LDLRAD3-202ENST00000524419 NFE4Q86UQ8 179 aa9.99□□□□□ -0.81
LDLRAD3-202ENST00000524419 SMR3AQ99954 134 aa9.99□□□□□ -0.81
LDLRAD3-202ENST00000524419 EMP1P54849 157 aa9.99□□□□□ -0.81
LDLRAD3-202ENST00000524419 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
LDLRAD3-202ENST00000524419 SETD2Q9BYW2 2564 aaPredicted RBP9.98□□□□□ -0.81
LDLRAD3-202ENST00000524419 IGHV3OR16-12A0A075B7B8 117 aa9.98□□□□□ -0.81
LDLRAD3-202ENST00000524419 A0A0J9YY99 117 aa9.98□□□□□ -0.81
LDLRAD3-202ENST00000524419 ADARB2-AS1A8MUL3 147 aa9.98□□□□□ -0.81
LDLRAD3-202ENST00000524419 RS1O15537 224 aa9.98□□□□□ -0.81
LDLRAD3-202ENST00000524419 TMEM170BQ5T4T1 132 aa9.98□□□□□ -0.81
LDLRAD3-202ENST00000524419 C1orf158Q8N1D5 194 aa9.98□□□□□ -0.81
LDLRAD3-202ENST00000524419 ZNRF2Q8NHG8 242 aa9.98□□□□□ -0.81
LDLRAD3-202ENST00000524419 SPANXB1Q9NS25 103 aaPredicted RBP9.98□□□□□ -0.81
LDLRAD3-202ENST00000524419 IGLV1-51P01701 117 aa9.97□□□□□ -0.81
LDLRAD3-202ENST00000524419 UBE2D1P51668 147 aa9.97□□□□□ -0.81
LDLRAD3-202ENST00000524419 AZU1P20160 251 aa9.97□□□□□ -0.81
LDLRAD3-202ENST00000524419 HIVEP1P15822 2718 aa9.96□□□□□ -0.81
LDLRAD3-202ENST00000524419 CUBNO60494 3623 aa9.96□□□□□ -0.81
LDLRAD3-202ENST00000524419 LY6G6DO95868 133 aa9.96□□□□□ -0.81
LDLRAD3-202ENST00000524419 IGHV3-53P01767 116 aa9.96□□□□□ -0.81
LDLRAD3-202ENST00000524419 Q6ZSN1 163 aa9.96□□□□□ -0.81
LDLRAD3-202ENST00000524419 IL17DQ8TAD2 202 aa9.96□□□□□ -0.81
LDLRAD3-202ENST00000524419 DNAJC30Q96LL9 226 aa9.96□□□□□ -0.81
LDLRAD3-202ENST00000524419 FAM110AQ9BQ89 295 aa9.96□□□□□ -0.81
LDLRAD3-202ENST00000524419 HIVEP2P31629 2446 aa9.96□□□□□ -0.82
LDLRAD3-202ENST00000524419 RPL24P83731 157 aaKnown RBP9.95□□□□□ -0.82
LDLRAD3-202ENST00000524419 SLC25A29Q8N8R3 303 aa9.95□□□□□ -0.82
LDLRAD3-202ENST00000524419 PGPEP1Q9NXJ5 209 aa9.95□□□□□ -0.82
LDLRAD3-202ENST00000524419 TMEM223A0PJW6 202 aa9.95□□□□□ -0.82
LDLRAD3-202ENST00000524419 H3BMG7 143 aa9.95□□□□□ -0.82
LDLRAD3-202ENST00000524419 J3QQQ9 107 aa9.95□□□□□ -0.82
LDLRAD3-202ENST00000524419 LEPROTO15243 131 aa9.95□□□□□ -0.82
LDLRAD3-202ENST00000524419 LGALS3P17931 250 aaKnown RBP9.95□□□□□ -0.82
LDLRAD3-202ENST00000524419 TSPEAR-AS2P59090 65 aa9.95□□□□□ -0.82
LDLRAD3-202ENST00000524419 COTL1Q14019 142 aa9.95□□□□□ -0.82
LDLRAD3-202ENST00000524419 OPRPNQ99935 248 aaPredicted RBP9.95□□□□□ -0.82
LDLRAD3-202ENST00000524419 IGLV4-3A0A075B6K6 122 aa9.94□□□□□ -0.82
LDLRAD3-202ENST00000524419 TEX48A0A1B0GUV7 120 aa9.94□□□□□ -0.82
LDLRAD3-202ENST00000524419 GAGE13Q4V321 117 aa9.94□□□□□ -0.82
LDLRAD3-202ENST00000524419 NDUFA11Q86Y39 141 aa9.94□□□□□ -0.82
LDLRAD3-202ENST00000524419 AMELXQ99217 191 aa9.94□□□□□ -0.82
LDLRAD3-202ENST00000524419 PYGO1Q9Y3Y4 419 aa9.94□□□□□ -0.82
LDLRAD3-202ENST00000524419 TRGV1A0A0A0MS02 117 aa9.94□□□□□ -0.82
LDLRAD3-202ENST00000524419 WFDC2Q14508 124 aa9.94□□□□□ -0.82
LDLRAD3-202ENST00000524419 TMEM263Q8WUH6 116 aaKnown RBP9.94□□□□□ -0.82
LDLRAD3-202ENST00000524419 VCX2Q9H322 139 aa9.94□□□□□ -0.82
LDLRAD3-202ENST00000524419 CRYBA4P53673 196 aa9.93□□□□□ -0.82
LDLRAD3-202ENST00000524419 PRO0461Q9UI25 63 aa9.93□□□□□ -0.82
LDLRAD3-202ENST00000524419 IGHV3-30P01768 117 aa9.92□□□□□ -0.82
LDLRAD3-202ENST00000524419 IGHV3-30-5P0DP03 117 aa9.92□□□□□ -0.82
LDLRAD3-202ENST00000524419 WFDC10AQ9H1F0 79 aa9.92□□□□□ -0.82
LDLRAD3-202ENST00000524419 NIPBLQ6KC79 2804 aaeCLIP9.92□□□□□ -0.82
LDLRAD3-202ENST00000524419 PF4P02776 101 aa9.92□□□□□ -0.82
LDLRAD3-202ENST00000524419 ZNF22P17026 224 aaPredicted RBP9.92□□□□□ -0.82
LDLRAD3-202ENST00000524419 RPL35AP18077 110 aaKnown RBP9.92□□□□□ -0.82
LDLRAD3-202ENST00000524419 LYRM7Q5U5X0 104 aa9.92□□□□□ -0.82
LDLRAD3-202ENST00000524419 C19orf73Q9NVV2 129 aa9.92□□□□□ -0.82
LDLRAD3-202ENST00000524419 Q9UF83 564 aa9.92□□□□□ -0.82
LDLRAD3-202ENST00000524419 J3QR89 54 aa9.91□□□□□ -0.82
LDLRAD3-202ENST00000524419 TSPAN13O95857 204 aa9.91□□□□□ -0.82
LDLRAD3-202ENST00000524419 CHCHD7Q9BUK0 85 aa9.91□□□□□ -0.82
LDLRAD3-202ENST00000524419 C1QTNF4Q9BXJ3 329 aa9.91□□□□□ -0.82
LDLRAD3-202ENST00000524419 GIG44P09565 113 aaPredicted RBP9.9□□□□□ -0.82
LDLRAD3-202ENST00000524419 KRTAP10-3P60369 221 aa9.9□□□□□ -0.82
LDLRAD3-202ENST00000524419 C16orf74Q96GX8 76 aa9.9□□□□□ -0.82
LDLRAD3-202ENST00000524419 SPANXA1Q9NS26 97 aa9.9□□□□□ -0.82
LDLRAD3-202ENST00000524419 APOMO95445 188 aa9.9□□□□□ -0.83
LDLRAD3-202ENST00000524419 UBE2D3P61077 147 aa9.9□□□□□ -0.83
LDLRAD3-202ENST00000524419 UBE2D2P62837 147 aa9.9□□□□□ -0.83
LDLRAD3-202ENST00000524419 Q6ZTI0 123 aa9.9□□□□□ -0.83
LDLRAD3-202ENST00000524419 TRAV4A0A0B4J268 109 aa9.89□□□□□ -0.83
LDLRAD3-202ENST00000524419 IGHV3-38A0A0C4DH36 116 aa9.89□□□□□ -0.83
LDLRAD3-202ENST00000524419 A0A0J9YXV3 536 aa9.89□□□□□ -0.83
LDLRAD3-202ENST00000524419 CFC1BP0CG36 223 aa9.89□□□□□ -0.83
LDLRAD3-202ENST00000524419 CFC1P0CG37 223 aa9.89□□□□□ -0.83
LDLRAD3-202ENST00000524419 JMJD1CQ15652 2540 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms