RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 AKR1C3P42330 323 aa3.92□□□□□ -1.78
FAM49B-228ENST00000523993 RPL36AP83881 106 aaKnown RBP3.92□□□□□ -1.78
FAM49B-228ENST00000523993 Q0VG73 95 aa3.92□□□□□ -1.78
FAM49B-228ENST00000523993 SRSF9Q13242 221 aaKnown RBP eCLIP3.92□□□□□ -1.78
FAM49B-228ENST00000523993 FAM74A4Q5TZK3 123 aa3.92□□□□□ -1.78
FAM49B-228ENST00000523993 Q8N976 141 aa3.92□□□□□ -1.78
FAM49B-228ENST00000523993 SFT2D1Q8WV19 159 aa3.92□□□□□ -1.78
FAM49B-228ENST00000523993 C11orf52Q96A22 123 aa3.92□□□□□ -1.78
FAM49B-228ENST00000523993 SMIM12Q96EX1 92 aa3.92□□□□□ -1.78
FAM49B-228ENST00000523993 KIF25-AS1Q9Y6Z4 181 aa3.92□□□□□ -1.78
FAM49B-228ENST00000523993 PKHD1L1Q86WI1 4243 aa3.92□□□□□ -1.78
FAM49B-228ENST00000523993 M0R381 172 aa3.91□□□□□ -1.78
FAM49B-228ENST00000523993 BCL2L11O43521 198 aa3.91□□□□□ -1.78
FAM49B-228ENST00000523993 PKIAP61925 76 aa3.91□□□□□ -1.78
FAM49B-228ENST00000523993 EIF5AP63241 154 aaKnown RBP3.91□□□□□ -1.78
FAM49B-228ENST00000523993 LINC01620Q4KN68 170 aa3.91□□□□□ -1.78
FAM49B-228ENST00000523993 TMEM97Q5BJF2 176 aa3.91□□□□□ -1.78
FAM49B-228ENST00000523993 TMUB2Q71RG4 321 aa3.91□□□□□ -1.78
FAM49B-228ENST00000523993 BAGE2Q86Y30 109 aa3.91□□□□□ -1.78
FAM49B-228ENST00000523993 OR10AG1Q8NH19 301 aa3.91□□□□□ -1.78
FAM49B-228ENST00000523993 DNAJC30Q96LL9 226 aa3.91□□□□□ -1.78
FAM49B-228ENST00000523993 ZNF471Q9BX82 626 aaPredicted RBP3.91□□□□□ -1.78
FAM49B-228ENST00000523993 PRR34Q9NV39 138 aa3.91□□□□□ -1.78
FAM49B-228ENST00000523993 URGCP-MRPS24S4R325 110 aa3.91□□□□□ -1.78
FAM49B-228ENST00000523993 LRP1Q07954 4544 aaKnown RBP3.91□□□□□ -1.78
FAM49B-228ENST00000523993 A0A087WX48 190 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 TMSB15BA0A087X1C1 80 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 KANTRA0A1W2PQU2 76 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 SMLR1H3BR10 107 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 PFDN1O60925 122 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 IGLV2-8P01709 118 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 IGLC6P0CF74 106 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 RAB5CP51148 216 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.79
FAM49B-228ENST00000523993 RPL19P84098 196 aaKnown RBP3.9□□□□□ -1.79
FAM49B-228ENST00000523993 ENHOQ6UWT2 76 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 Q6ZVQ6 151 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 LINC00518Q8N0U6 118 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 FAM213BQ8TBF2 198 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 BAALCQ8WXS3 180 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 MANBALQ9NQG1 85 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 KLK12Q9UKR0 248 aa3.9□□□□□ -1.79
FAM49B-228ENST00000523993 IGKV2D-24A0A075B6R9 120 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 C19orf71A6NCJ1 209 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 RBFOX3A6NFN3 312 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 KRTAP29-1A8MX34 341 aaPredicted RBP3.89□□□□□ -1.79
FAM49B-228ENST00000523993 RPL35P42766 123 aaKnown RBP3.89□□□□□ -1.79
FAM49B-228ENST00000523993 CCL20P78556 96 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 HAMPP81172 84 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 MIAQ16674 131 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 IQCJQ1A5X6 159 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 C14orf177Q52M58 125 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 MPV17L2Q567V2 206 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 SPANXN1Q5VSR9 72 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 KRTAP26-1Q6PEX3 210 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 KCNIP4Q6PIL6 250 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 NTM-AS1Q6ZSK4 140 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 SCXQ7RTU7 201 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.89□□□□□ -1.79
FAM49B-228ENST00000523993 DEFB104AQ8WTQ1 72 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 UBE2WQ96B02 151 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 C2orf48Q96LS8 159 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 AP1S3Q96PC3 154 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 CHAC1Q9BUX1 264 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 FAT3Q8TDW7 4589 aa3.89□□□□□ -1.79
FAM49B-228ENST00000523993 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.88□□□□□ -1.79
FAM49B-228ENST00000523993 A0A1B0GUV1 79 aa3.88□□□□□ -1.79
FAM49B-228ENST00000523993 F2Z2F3 143 aa3.88□□□□□ -1.79
FAM49B-228ENST00000523993 M0QY20 66 aa3.88□□□□□ -1.79
FAM49B-228ENST00000523993 LECT2O14960 151 aa3.88□□□□□ -1.79
FAM49B-228ENST00000523993 SULT1A2P50226 295 aa3.88□□□□□ -1.79
FAM49B-228ENST00000523993 RPS20P60866 119 aaKnown RBP3.88□□□□□ -1.79
FAM49B-228ENST00000523993 TWIST1Q15672 202 aa3.88□□□□□ -1.79
FAM49B-228ENST00000523993 ZNF56Q15929 161 aa3.88□□□□□ -1.79
FAM49B-228ENST00000523993 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
FAM49B-228ENST00000523993 EIF5AL1Q6IS14 154 aaKnown RBP3.88□□□□□ -1.79
FAM49B-228ENST00000523993 PGLYRP4Q96LB8 373 aa3.88□□□□□ -1.79
FAM49B-228ENST00000523993 DERL1Q9BUN8 251 aa3.88□□□□□ -1.79
FAM49B-228ENST00000523993 CNFNQ9BYD5 112 aa3.88□□□□□ -1.79
FAM49B-228ENST00000523993 TRBV20OR9-2A0A075B6H5 130 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 TRBV25-1A0A075B6N4 114 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 TMEM262E9PQX1 116 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 TEX46H3BTG2 121 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 H7C1H1 209 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 PDE6DO43924 150 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 CRPP02741 224 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 ANGP03950 147 aaKnown RBP3.87□□□□□ -1.79
FAM49B-228ENST00000523993 SMIM17P0DL12 118 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 RBX1P62877 108 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 CACNG7P62955 275 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 MEF2BQ02080 365 aaPredicted RBP3.87□□□□□ -1.79
FAM49B-228ENST00000523993 CENPWQ5EE01 88 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 TCTE3Q8IZS6 198 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 C9orf62Q8N4C0 152 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 C9orf163Q8N9P6 203 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 FER1L6-AS1Q8NA97 138 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 CIRBP-AS1Q8TBR5 109 aa3.87□□□□□ -1.79
FAM49B-228ENST00000523993 TRAV8-4A0A0B4J246 113 aa3.86□□□□□ -1.79
FAM49B-228ENST00000523993 IGHV1-24A0A0C4DH33 117 aa3.86□□□□□ -1.79
FAM49B-228ENST00000523993 A0A1B0GV50 99 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms