RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 HSBP1O75506 76 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 BRI3O95415 125 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 MT-ND6P03923 174 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 P0DMU3 169 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 FAM231AP0DMU4 169 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 FAM231CP0DMU5 169 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 AZU1P20160 251 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 CKS2P33552 79 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 IFI27P40305 119 aaPredicted RBP1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 CTRLP40313 264 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 ZNF56Q15929 161 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 C9orf129Q5T035 196 aaKnown RBP1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 AMTNQ6UX39 209 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 FOXI2Q6ZQN5 318 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 Q6ZR54 194 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 KCNS1Q96KK3 526 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 C18orf15Q96N68 181 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 PPDPFQ9H3Y8 114 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 RETNQ9HD89 108 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 PHLDA3Q9Y5J5 127 aa1.88□□□□□ -2.11
CKS1BP7-201ENST00000522230 NSD1Q96L73 2696 aaPredicted RBP1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 MXRA5Q9NR99 2828 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 TRGV1A0A0A0MS02 117 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 IGHV1-24A0A0C4DH33 117 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 LINC00587B1AMM8 73 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 KLLNB2CW77 178 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 RS1O15537 224 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 CRXO43186 299 aaPredicted RBP1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 ZNF324O75467 553 aaPredicted RBP1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 INSP01308 110 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 S100A8P05109 93 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 C3orf79P0CE67 100 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 RNASE3P12724 160 aaKnown RBP1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 HLA-DRB4P13762 266 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 RAB4AP20338 218 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 TSPOP30536 169 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 CDKN1BP46527 198 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 CACNG7P62955 275 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 TDRG1Q3Y452 100 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 FAM104BQ5XKR9 115 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 OTOGQ6ZRI0 2925 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 SMIM15Q7Z3B0 74 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 ATP5L2Q7Z4Y8 100 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 NDUFA11Q86Y39 141 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 C1orf158Q8N1D5 194 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 OR2K2Q8NGT1 345 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 SMIM12Q96EX1 92 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 FAM19A4Q96LR4 140 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 KIR2DL4Q99706 377 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 CITED1Q99966 193 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 MAP1LC3AQ9H492 121 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 ZNF256Q9Y2P7 627 aaPredicted RBP1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 HLA-DRB4X5D2U9 266 aa1.87□□□□□ -2.11
CKS1BP7-201ENST00000522230 TRAV26-1A0A087WT03 109 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 SNAI2O43623 268 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 OR5AL1P0C617 328 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 LINC00614P0C842 121 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 SMIM6P0DI80 62 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 SMIM17P0DL12 118 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 DEFB130BP0DP73 79 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 DEFB130AP0DP74 79 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 HTN3P15516 51 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 KRTAP10-7P60409 375 aaPredicted RBP1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 Q0VG73 95 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 BATFQ16520 125 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 DEFB135Q30KP9 77 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 COX19Q49B96 90 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 RNASE13Q5GAN3 156 aaKnown RBP1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 OR10J3Q5JRS4 329 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 COA6Q5JTJ3 125 aaKnown RBP1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 Q6AWC8 147 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 RASL11AQ6T310 242 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 C12orf54Q6X4T0 127 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 ZNF705AQ6ZN79 300 aaPredicted RBP1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 Q6ZTI0 123 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 ORMDL3Q8N138 153 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 MTURNQ8N3F0 131 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 C3orf56Q8N813 242 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 Q8N976 141 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 GATD1Q8NB37 220 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 TMEM158Q8WZ71 300 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 AP1S3Q96PC3 154 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 TMEM191AQ9H0A3 160 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 DPH3P1Q9H4G8 78 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 NOP10Q9NPE3 64 aaKnown RBP1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 ZMAT5Q9UDW3 170 aaKnown RBP1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 U3KQK5 164 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 NF1P21359 2839 aa1.86□□□□□ -2.11
CKS1BP7-201ENST00000522230 STAB1Q9NY15 2570 aa1.85□□□□□ -2.11
CKS1BP7-201ENST00000522230 MAST4O15021 2626 aa1.85□□□□□ -2.11
CKS1BP7-201ENST00000522230 A0A096LNJ9 63 aa1.85□□□□□ -2.11
CKS1BP7-201ENST00000522230 A0A096LPF7 62 aa1.85□□□□□ -2.11
CKS1BP7-201ENST00000522230 TRAV25A0A0B4J276 109 aa1.85□□□□□ -2.11
CKS1BP7-201ENST00000522230 A0A1B0GW15 77 aa1.85□□□□□ -2.11
CKS1BP7-201ENST00000522230 A0A1B0GWB2 263 aa1.85□□□□□ -2.11
CKS1BP7-201ENST00000522230 FAM231BA6NCW3 169 aa1.85□□□□□ -2.11
CKS1BP7-201ENST00000522230 LEPROTL1O95214 131 aa1.85□□□□□ -2.11
CKS1BP7-201ENST00000522230 IGLV1-51P01701 117 aa1.85□□□□□ -2.11
CKS1BP7-201ENST00000522230 FCER1GP30273 86 aa1.85□□□□□ -2.11
CKS1BP7-201ENST00000522230 SEC61GP60059 68 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms