RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 ATP6V0E2Q8NHE4 81 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 ZNRF2Q8NHG8 242 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 LINC00588Q9Y4M8 146 aa5.74□□□□□ -1.49
VPS13B-210ENST00000521932 TRAV26-2A0A0B4J265 109 aa5.73□□□□□ -1.49
VPS13B-210ENST00000521932 LCE6AA0A183 80 aa5.73□□□□□ -1.49
VPS13B-210ENST00000521932 UBE2D3P61077 147 aa5.73□□□□□ -1.49
VPS13B-210ENST00000521932 UBE2D2P62837 147 aa5.73□□□□□ -1.49
VPS13B-210ENST00000521932 DAZ4Q86SG3 579 aaKnown RBP5.73□□□□□ -1.49
VPS13B-210ENST00000521932 MRAP2Q96G30 205 aa5.73□□□□□ -1.49
VPS13B-210ENST00000521932 UPK3BQ9BT76 320 aa5.73□□□□□ -1.49
VPS13B-210ENST00000521932 GTSF1LQ9H1H1 148 aa5.73□□□□□ -1.49
VPS13B-210ENST00000521932 DAZ3Q9NR90 486 aaKnown RBP5.73□□□□□ -1.49
VPS13B-210ENST00000521932 URGCP-MRPS24S4R325 110 aa5.73□□□□□ -1.49
VPS13B-210ENST00000521932 KMT2CQ8NEZ4 4911 aaKnown RBP5.73□□□□□ -1.49
VPS13B-210ENST00000521932 TRBV24-1A0A075B6N3 115 aa5.72□□□□□ -1.49
VPS13B-210ENST00000521932 TRBV6-5A0A0K0K1A5 114 aa5.72□□□□□ -1.49
VPS13B-210ENST00000521932 LY6G6CO95867 125 aa5.72□□□□□ -1.49
VPS13B-210ENST00000521932 ELOBQ15370 118 aa5.72□□□□□ -1.49
VPS13B-210ENST00000521932 MRPL51Q4U2R6 128 aaKnown RBP5.72□□□□□ -1.49
VPS13B-210ENST00000521932 MRPS16Q9Y3D3 137 aaKnown RBP5.72□□□□□ -1.49
VPS13B-210ENST00000521932 TNFRSF18Q9Y5U5 241 aa5.72□□□□□ -1.49
VPS13B-210ENST00000521932 GAS8-AS1O95177 125 aa5.71□□□□□ -1.5
VPS13B-210ENST00000521932 PPP1R17O96001 155 aa5.71□□□□□ -1.5
VPS13B-210ENST00000521932 PPBPP02775 128 aa5.71□□□□□ -1.5
VPS13B-210ENST00000521932 COX19Q49B96 90 aa5.71□□□□□ -1.5
VPS13B-210ENST00000521932 LELP1Q5T871 98 aa5.71□□□□□ -1.5
VPS13B-210ENST00000521932 TMEM136Q6ZRR5 245 aa5.71□□□□□ -1.5
VPS13B-210ENST00000521932 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.71□□□□□ -1.5
VPS13B-210ENST00000521932 RPL39LQ96EH5 51 aaKnown RBP5.71□□□□□ -1.5
VPS13B-210ENST00000521932 YPEL4Q96NS1 127 aa5.71□□□□□ -1.5
VPS13B-210ENST00000521932 LYSTQ99698 3801 aa5.71□□□□□ -1.5
VPS13B-210ENST00000521932 GNB1LQ9BYB4 327 aa5.71□□□□□ -1.5
VPS13B-210ENST00000521932 TRBV6-8A0A0A6YYG3 113 aa5.7□□□□□ -1.5
VPS13B-210ENST00000521932 PHOX2AO14813 284 aa5.7□□□□□ -1.5
VPS13B-210ENST00000521932 CKS2P33552 79 aa5.7□□□□□ -1.5
VPS13B-210ENST00000521932 RPS10P46783 165 aaKnown RBP5.7□□□□□ -1.5
VPS13B-210ENST00000521932 POLR2KP53803 58 aaKnown RBP5.7□□□□□ -1.5
VPS13B-210ENST00000521932 TMEM97Q5BJF2 176 aa5.7□□□□□ -1.5
VPS13B-210ENST00000521932 UBE2DNLQ8IWF7 75 aa5.7□□□□□ -1.5
VPS13B-210ENST00000521932 NRACQ8N912 160 aa5.7□□□□□ -1.5
VPS13B-210ENST00000521932 Q9H8V8 135 aa5.7□□□□□ -1.5
VPS13B-210ENST00000521932 SMCO4Q9NRQ5 59 aa5.7□□□□□ -1.5
VPS13B-210ENST00000521932 HYDINQ4G0P3 5121 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 TGIF2-C20orf24A0A0A6YYL0 155 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 TRBV27A0A0K0K1C4 114 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 SDHAF1A6NFY7 115 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 GAGE10A6NGK3 116 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 D6R8Y8 96 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 SMKR1H3BMG3 65 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 HLA-DQA1P01909 254 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 OR10J3Q5JRS4 329 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 NTM-AS1Q6ZSK4 140 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 ORMDL3Q8N138 153 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 NTN5Q8WTR8 489 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-210ENST00000521932 C20orf78Q9BR46 151 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 ST20Q9HBF5 79 aa5.69□□□□□ -1.5
VPS13B-210ENST00000521932 TRAV8-6A0A0B4J262 113 aa5.68□□□□□ -1.5
VPS13B-210ENST00000521932 IGHV3-38A0A0C4DH36 116 aa5.68□□□□□ -1.5
VPS13B-210ENST00000521932 K7EP13 123 aa5.68□□□□□ -1.5
VPS13B-210ENST00000521932 VCYO14598 125 aa5.68□□□□□ -1.5
VPS13B-210ENST00000521932 PRYO14603 147 aa5.68□□□□□ -1.5
VPS13B-210ENST00000521932 SIVA1O15304 175 aa5.68□□□□□ -1.5
VPS13B-210ENST00000521932 NCR2O95944 276 aa5.68□□□□□ -1.5
VPS13B-210ENST00000521932 MT-ND6P03923 174 aa5.68□□□□□ -1.5
VPS13B-210ENST00000521932 DNAH10OSP0CZ25 163 aa5.68□□□□□ -1.5
VPS13B-210ENST00000521932 RPL32P62910 135 aaKnown RBP5.68□□□□□ -1.5
VPS13B-210ENST00000521932 FOXI1Q12951 378 aa5.68□□□□□ -1.5
VPS13B-210ENST00000521932 TMEM70Q9BUB7 260 aa5.68□□□□□ -1.5
VPS13B-210ENST00000521932 LAMTOR2Q9Y2Q5 125 aa5.68□□□□□ -1.5
VPS13B-210ENST00000521932 TRBV25-1A0A075B6N4 114 aa5.67□□□□□ -1.5
VPS13B-210ENST00000521932 I3L3M4 83 aa5.67□□□□□ -1.5
VPS13B-210ENST00000521932 NPYP01303 97 aa5.67□□□□□ -1.5
VPS13B-210ENST00000521932 APCSP02743 223 aa5.67□□□□□ -1.5
VPS13B-210ENST00000521932 IQCJQ1A5X6 159 aa5.67□□□□□ -1.5
VPS13B-210ENST00000521932 WFDC10BQ8IUB3 73 aa5.67□□□□□ -1.5
VPS13B-210ENST00000521932 CBLN2Q8IUK8 224 aa5.67□□□□□ -1.5
VPS13B-210ENST00000521932 PRELID3AQ96N28 172 aa5.67□□□□□ -1.5
VPS13B-210ENST00000521932 ALMS1Q8TCU4 4167 aa5.66□□□□□ -1.5
VPS13B-210ENST00000521932 IGHV1-24A0A0C4DH33 117 aa5.66□□□□□ -1.5
VPS13B-210ENST00000521932 NBDYA0A0U1RRE5 68 aa5.66□□□□□ -1.5
VPS13B-210ENST00000521932 PMCHP20382 165 aa5.66□□□□□ -1.5
VPS13B-210ENST00000521932 S100A1P23297 94 aa5.66□□□□□ -1.5
VPS13B-210ENST00000521932 COTL1Q14019 142 aa5.66□□□□□ -1.5
VPS13B-210ENST00000521932 LINC01556Q5JQF7 62 aa5.66□□□□□ -1.5
VPS13B-210ENST00000521932 Q6ZR54 194 aa5.66□□□□□ -1.5
VPS13B-210ENST00000521932 NIT1Q86X76 327 aa5.66□□□□□ -1.5
VPS13B-210ENST00000521932 KMT2AQ03164 3969 aa5.66□□□□□ -1.5
VPS13B-210ENST00000521932 IGLV2-18A0A075B6J9 118 aa5.65□□□□□ -1.5
VPS13B-210ENST00000521932 TRAV9-2A0A087WT02 112 aa5.65□□□□□ -1.5
VPS13B-210ENST00000521932 COLCA2A8K830 154 aa5.65□□□□□ -1.5
VPS13B-210ENST00000521932 TCAPO15273 167 aa5.65□□□□□ -1.5
VPS13B-210ENST00000521932 SCGB1D1O95968 90 aa5.65□□□□□ -1.5
VPS13B-210ENST00000521932 TSHBP01222 138 aa5.65□□□□□ -1.5
VPS13B-210ENST00000521932 KIAA1644Q3SXP7 199 aa5.65□□□□□ -1.5
VPS13B-210ENST00000521932 KIR2DL4Q99706 377 aa5.65□□□□□ -1.5
VPS13B-210ENST00000521932 ALKBH7Q9BT30 221 aaPredicted RBP5.65□□□□□ -1.5
VPS13B-210ENST00000521932 CHCHD7Q9BUK0 85 aa5.65□□□□□ -1.5
VPS13B-210ENST00000521932 TRAPPC1Q9Y5R8 145 aa5.65□□□□□ -1.5
VPS13B-210ENST00000521932 A0A1B0GUV1 79 aa5.64□□□□□ -1.51
VPS13B-210ENST00000521932 H7C423 109 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 188.4 ms