RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 VSIG2Q96IQ7 327 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 RNASE7Q9H1E1 156 aaKnown RBP2.14□□□□□ -2.07
VPS13B-209ENST00000521559 RPP21Q9H633 154 aaKnown RBP2.14□□□□□ -2.07
VPS13B-209ENST00000521559 OSTCQ9NRP0 149 aa2.14□□□□□ -2.07
VPS13B-209ENST00000521559 MRPL16Q9NX20 251 aaKnown RBP2.14□□□□□ -2.07
VPS13B-209ENST00000521559 VWFP04275 2813 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 FBN3Q75N90 2809 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 TRGV2A0A075B6R0 118 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 DEFB131BA0A096LNP1 70 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 TRAV4A0A0B4J268 109 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 NUPR2A6NF83 97 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 A8MWV9 139 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 F5H768 121 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 F8W036 122 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 H3BVH4 76 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 PPP1R2P9O14990 202 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 RS1O15537 224 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 SNAI2O43623 268 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 MT-ND4LP03901 98 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 ATP5G1P05496 136 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 IGLC6P0CF74 106 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 GZMBP10144 247 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 FOXA3P55318 350 aaPredicted RBP2.13□□□□□ -2.07
VPS13B-209ENST00000521559 CACNG7P62955 275 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 SLAQ13239 276 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 ADIRFQ15847 76 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 NDUFA5Q16718 116 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 C10orf91Q5T1B1 145 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 ZFAND6Q6FIF0 208 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 ZFP82Q8N141 532 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 OR4C5Q8NGB2 326 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 OR10AG1Q8NH19 301 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 TSKUQ8WUA8 353 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 SFRP2Q96HF1 295 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 FAM210BQ96KR6 192 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 SEC11CQ9BY50 192 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 KLK5Q9Y337 293 aaPredicted RBP2.13□□□□□ -2.07
VPS13B-209ENST00000521559 PHLDA3Q9Y5J5 127 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 V9GYV3 84 aa2.13□□□□□ -2.07
VPS13B-209ENST00000521559 TRGV4A0A0C4DH28 118 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 MUC21A0A0G2JKD1 596 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 MUC21A0A140T8X8 626 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 TRBV6-4A0A1B0GX49 114 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 SMIM27A0A1W2PRY6 76 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 FAM231BA6NCW3 169 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 IGLL5B9A064 214 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 H3BNG1 76 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 M0R381 172 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 IGHV3-53P01767 116 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 CRYGDP07320 174 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 HTN3P15516 51 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 ADCYAP1P18509 176 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 NTF3P20783 257 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 CTRLP40313 264 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 CRYBA4P53673 196 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 TCTAP57738 103 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 PRR4Q16378 134 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 SPANXN1Q5VSR9 72 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 CFAP126Q5VTH2 177 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 LYZL1Q6UWQ5 148 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 ZFP2Q6ZN57 461 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 SLC7A5P1Q8MH63 180 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 PGLYRP4Q96LB8 373 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 CNFNQ9BYD5 112 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 SAMD10Q9BYL1 202 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 VCX2Q9H322 139 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 NAT8BQ9UHF3 227 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 PRO0255Q9UI72 69 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 HHLA3Q9XRX5 114 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 CARHSP1Q9Y2V2 147 aaKnown RBP2.12□□□□□ -2.07
VPS13B-209ENST00000521559 NOTCH1P46531 2555 aa2.12□□□□□ -2.07
VPS13B-209ENST00000521559 TRAV26-1A0A087WT03 109 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 A0A087WWC5 75 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 A0A0J9YY99 117 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 LOC100131303A0A0U1RQF7 123 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 A0A1B0GUT8 65 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 C7orf77A4D0Y5 90 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 HIGD1CA8MV81 97 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 TRGC1P0CF51 173 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 EVI2AP22794 236 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 LINC00315P59091 139 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 RAB4BP61018 213 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 C9orf129Q5T035 196 aaKnown RBP2.11□□□□□ -2.07
VPS13B-209ENST00000521559 CASC10Q5T4H9 136 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
VPS13B-209ENST00000521559 C15orf53Q8NAA6 179 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 NUP35Q8NFH5 326 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 BORCS7Q96B45 105 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 IMMP2LQ96T52 175 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 PRADC1Q9BSG0 188 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 TMEM242Q9NWH2 141 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 APLNQ9ULZ1 77 aa2.11□□□□□ -2.07
VPS13B-209ENST00000521559 TRRAPQ9Y4A5 3859 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 TRAV9-1A0A075B6T8 112 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 IGHV3-73A0A0B4J1V6 119 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 TRBV10-1A0A0K0K1A3 114 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 A0A1B0GW15 77 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 M0QY20 66 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 SNAPINO95295 136 aa2.1□□□□□ -2.07
VPS13B-209ENST00000521559 APOC3P02656 99 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms