RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 C20orf203Q8NBC4 194 aa16.83■□□□□ 0.28
LAPTM4B-203ENST00000521545 IGLV10-54A0A075B6I4 117 aa16.82■□□□□ 0.28
LAPTM4B-203ENST00000521545 TRAV8-4A0A0B4J246 113 aa16.82■□□□□ 0.28
LAPTM4B-203ENST00000521545 AMTP48728 403 aa16.82■□□□□ 0.28
LAPTM4B-203ENST00000521545 KRTAP26-1Q6PEX3 210 aa16.82■□□□□ 0.28
LAPTM4B-203ENST00000521545 DEFB104AQ8WTQ1 72 aa16.82■□□□□ 0.28
LAPTM4B-203ENST00000521545 hCG_2014768A0A024R1R8 64 aa16.81■□□□□ 0.28
LAPTM4B-203ENST00000521545 J3QL48 77 aa16.81■□□□□ 0.28
LAPTM4B-203ENST00000521545 CLRN3Q8NCR9 226 aa16.81■□□□□ 0.28
LAPTM4B-203ENST00000521545 IGLV4-60A0A075B6I1 120 aa16.8■□□□□ 0.28
LAPTM4B-203ENST00000521545 GATCO43716 136 aaKnown RBP16.8■□□□□ 0.28
LAPTM4B-203ENST00000521545 GATD1Q8NB37 220 aa16.8■□□□□ 0.28
LAPTM4B-203ENST00000521545 A8MWL6 223 aa16.78■□□□□ 0.28
LAPTM4B-203ENST00000521545 CEBPGP53567 150 aa16.78■□□□□ 0.28
LAPTM4B-203ENST00000521545 C9orf163Q8N9P6 203 aa16.78■□□□□ 0.28
LAPTM4B-203ENST00000521545 GTSF1Q8WW33 167 aa16.78■□□□□ 0.28
LAPTM4B-203ENST00000521545 TRAV26-2A0A0B4J265 109 aa16.77■□□□□ 0.28
LAPTM4B-203ENST00000521545 TEX261Q6UWH6 196 aa16.76■□□□□ 0.27
LAPTM4B-203ENST00000521545 FAM231DQ6ZW35 169 aa16.76■□□□□ 0.27
LAPTM4B-203ENST00000521545 LYPD6BQ8NI32 183 aa16.76■□□□□ 0.27
LAPTM4B-203ENST00000521545 GFRA4Q9GZZ7 299 aa16.75■□□□□ 0.27
LAPTM4B-203ENST00000521545 hDV102S1A0JD36 115 aa16.74■□□□□ 0.27
LAPTM4B-203ENST00000521545 EIF5A2Q9GZV4 153 aaKnown RBP16.74■□□□□ 0.27
LAPTM4B-203ENST00000521545 BORCS7Q96B45 105 aa16.73■□□□□ 0.27
LAPTM4B-203ENST00000521545 RPL39LQ96EH5 51 aaKnown RBP16.73■□□□□ 0.27
LAPTM4B-203ENST00000521545 AP5S1Q9NUS5 200 aa16.73■□□□□ 0.27
LAPTM4B-203ENST00000521545 NCR2O95944 276 aa16.72■□□□□ 0.27
LAPTM4B-203ENST00000521545 FOXA3P55318 350 aaPredicted RBP16.72■□□□□ 0.27
LAPTM4B-203ENST00000521545 AMMECR1LQ6DCA0 310 aa16.72■□□□□ 0.27
LAPTM4B-203ENST00000521545 CT83Q5H943 113 aa16.71■□□□□ 0.27
LAPTM4B-203ENST00000521545 KRTAP29-1A8MX34 341 aaPredicted RBP16.7■□□□□ 0.26
LAPTM4B-203ENST00000521545 CNBPP62633 177 aaKnown RBP16.7■□□□□ 0.26
LAPTM4B-203ENST00000521545 SMIM7Q9BQ49 75 aa16.7■□□□□ 0.26
LAPTM4B-203ENST00000521545 APCSP02743 223 aa16.69■□□□□ 0.26
LAPTM4B-203ENST00000521545 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.68■□□□□ 0.26
LAPTM4B-203ENST00000521545 IGKV3OR2-268A0A0C4DH90 116 aa16.68■□□□□ 0.26
LAPTM4B-203ENST00000521545 SDHAF1A6NFY7 115 aa16.68■□□□□ 0.26
LAPTM4B-203ENST00000521545 NDUFS6O75380 124 aaKnown RBP16.68■□□□□ 0.26
LAPTM4B-203ENST00000521545 RNASEKQ6P5S7 137 aaKnown RBP16.68■□□□□ 0.26
LAPTM4B-203ENST00000521545 SDIM1Q6ZPB5 146 aa16.68■□□□□ 0.26
LAPTM4B-203ENST00000521545 H7C423 109 aa16.67■□□□□ 0.26
LAPTM4B-203ENST00000521545 PMCHP20382 165 aa16.67■□□□□ 0.26
LAPTM4B-203ENST00000521545 KRTAP10-4P60372 401 aaPredicted RBP16.67■□□□□ 0.26
LAPTM4B-203ENST00000521545 CFAP161Q6P656 301 aa16.67■□□□□ 0.26
LAPTM4B-203ENST00000521545 GAGE12HA6NDE8 117 aa16.66■□□□□ 0.26
LAPTM4B-203ENST00000521545 RPL37AP61513 92 aaKnown RBP16.66■□□□□ 0.26
LAPTM4B-203ENST00000521545 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.66■□□□□ 0.26
LAPTM4B-203ENST00000521545 IGHV3-64A0A075B6Q5 118 aa16.65■□□□□ 0.26
LAPTM4B-203ENST00000521545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.65■□□□□ 0.26
LAPTM4B-203ENST00000521545 A0A1B0GUT8 65 aa16.65■□□□□ 0.26
LAPTM4B-203ENST00000521545 IGKV2-29A2NJV5 120 aaPredicted RBP16.65■□□□□ 0.26
LAPTM4B-203ENST00000521545 ZNF727A8MUV8 499 aa16.65■□□□□ 0.26
LAPTM4B-203ENST00000521545 I3L3M4 83 aa16.65■□□□□ 0.26
LAPTM4B-203ENST00000521545 LINC01551Q86U37 167 aa16.65■□□□□ 0.26
LAPTM4B-203ENST00000521545 TSKUQ8WUA8 353 aa16.65■□□□□ 0.26
LAPTM4B-203ENST00000521545 FAM210AQ96ND0 272 aa16.65■□□□□ 0.26
LAPTM4B-203ENST00000521545 DPH3Q96FX2 82 aa16.64■□□□□ 0.25
LAPTM4B-203ENST00000521545 TRBV6-5A0A0K0K1A5 114 aa16.63■□□□□ 0.25
LAPTM4B-203ENST00000521545 HIGD1CA8MV81 97 aa16.63■□□□□ 0.25
LAPTM4B-203ENST00000521545 FGF6P10767 208 aa16.63■□□□□ 0.25
LAPTM4B-203ENST00000521545 ST20Q9HBF5 79 aa16.63■□□□□ 0.25
LAPTM4B-203ENST00000521545 OSTCQ9NRP0 149 aa16.63■□□□□ 0.25
LAPTM4B-203ENST00000521545 FAM231BA6NCW3 169 aa16.62■□□□□ 0.25
LAPTM4B-203ENST00000521545 TMEM191AQ9H0A3 160 aa16.62■□□□□ 0.25
LAPTM4B-203ENST00000521545 PANO1I0J062 215 aa16.61■□□□□ 0.25
LAPTM4B-203ENST00000521545 SRP19P09132 144 aaKnown RBP16.61■□□□□ 0.25
LAPTM4B-203ENST00000521545 CHCHD10Q8WYQ3 142 aaPredicted RBP16.61■□□□□ 0.25
LAPTM4B-203ENST00000521545 TMEM101Q96IK0 257 aa16.61■□□□□ 0.25
LAPTM4B-203ENST00000521545 BTF3L4Q96K17 158 aa16.61■□□□□ 0.25
LAPTM4B-203ENST00000521545 SLPIP03973 132 aa16.6■□□□□ 0.25
LAPTM4B-203ENST00000521545 ZNF25P17030 456 aaPredicted RBP16.6■□□□□ 0.25
LAPTM4B-203ENST00000521545 OXTP01178 125 aa16.58■□□□□ 0.24
LAPTM4B-203ENST00000521545 C15orf56Q8N910 161 aa16.58■□□□□ 0.24
LAPTM4B-203ENST00000521545 RAB4AP20338 218 aa16.57■□□□□ 0.24
LAPTM4B-203ENST00000521545 CIRBPQ14011 172 aaKnown RBP16.57■□□□□ 0.24
LAPTM4B-203ENST00000521545 OR5A1Q8NGJ0 315 aa16.57■□□□□ 0.24
LAPTM4B-203ENST00000521545 MRAP2Q96G30 205 aa16.57■□□□□ 0.24
LAPTM4B-203ENST00000521545 GAS8-AS1O95177 125 aa16.56■□□□□ 0.24
LAPTM4B-203ENST00000521545 RIGQ13278 110 aa16.56■□□□□ 0.24
LAPTM4B-203ENST00000521545 TMEM241Q24JQ0 296 aa16.56■□□□□ 0.24
LAPTM4B-203ENST00000521545 RNF185Q96GF1 192 aa16.56■□□□□ 0.24
LAPTM4B-203ENST00000521545 TMEM242Q9NWH2 141 aa16.56■□□□□ 0.24
LAPTM4B-203ENST00000521545 TSHBP01222 138 aa16.55■□□□□ 0.24
LAPTM4B-203ENST00000521545 ESDP10768 282 aa16.55■□□□□ 0.24
LAPTM4B-203ENST00000521545 RPS10P46783 165 aaKnown RBP16.55■□□□□ 0.24
LAPTM4B-203ENST00000521545 HIGD2BQ4VC39 106 aa16.55■□□□□ 0.24
LAPTM4B-203ENST00000521545 FAM74A3Q4VXF1 159 aa16.55■□□□□ 0.24
LAPTM4B-203ENST00000521545 POLR2KP53803 58 aaKnown RBP16.54■□□□□ 0.24
LAPTM4B-203ENST00000521545 AMN1Q8IY45 258 aa16.54■□□□□ 0.24
LAPTM4B-203ENST00000521545 V9GYV3 84 aa16.54■□□□□ 0.24
LAPTM4B-203ENST00000521545 TRBV27A0A0K0K1C4 114 aa16.52■□□□□ 0.24
LAPTM4B-203ENST00000521545 CHTF8P0CG12 524 aa16.52■□□□□ 0.24
LAPTM4B-203ENST00000521545 NUP35Q8NFH5 326 aa16.52■□□□□ 0.24
LAPTM4B-203ENST00000521545 ISOC2Q96AB3 205 aa16.52■□□□□ 0.24
LAPTM4B-203ENST00000521545 A0A087WYN8 130 aa16.51■□□□□ 0.23
LAPTM4B-203ENST00000521545 LINC00959A0A1B0GUT2 108 aa16.51■□□□□ 0.23
LAPTM4B-203ENST00000521545 PPP1R17O96001 155 aa16.51■□□□□ 0.23
LAPTM4B-203ENST00000521545 XCL1P47992 114 aa16.51■□□□□ 0.23
LAPTM4B-203ENST00000521545 FOXI1Q12951 378 aa16.51■□□□□ 0.23
LAPTM4B-203ENST00000521545 VCYO14598 125 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms