RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 IGHV3-30P01768 117 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 IGHV3-33P01772 117 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 IGHV3-30-5P0DP03 117 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 HERVK_113P63121 156 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 CCL8P80075 99 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 FBXL19-AS1Q494R0 122 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 TTC32Q5I0X7 151 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 FAM201AQ5SY85 155 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 DUX4L9Q6RFH8 374 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 LINC00305Q7Z4B0 112 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 ORMDL3Q8N138 153 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 C10orf126Q8N4M7 172 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 DEFB124Q8NES8 71 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 DEFB108BQ8NET1 73 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 PRADC1Q9BSG0 188 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 CYSTM1Q9H1C7 97 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 MRPL35Q9NZE8 188 aaKnown RBP2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 MRPL36Q9P0J6 103 aaKnown RBP2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 XCL2Q9UBD3 114 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 ARHGAP32A7KAX9 2087 aa2.01□□□□□ -2.09
HMGB1P41-201ENST00000520234 COL6A3P12111 3177 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 IGLV11-55A0A075B6I3 123 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 TRBV19A0A075B6N1 114 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 TRAV8-1A0A0A6YYK1 113 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 TRAV40A0A0B4J280 105 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 IGHV1-3A0A0C4DH29 117 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 A0A0J9YY99 117 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 RBAKDNA6NC62 111 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 OOSP1A8MZH6 123 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 E7EQL1 145 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 F5H768 121 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 M0R1W7 72 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 OVOL1O14753 267 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 SLC25A20O43772 301 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 SNCGO76070 127 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 NDUFA3O95167 84 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 IGKV1-17P01599 117 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 IL4P05112 153 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 ATP5G1P05496 136 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 SCGB1C2P0DMR2 95 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 CCL3L1P16619 93 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 RPL27AP46776 148 aaKnown RBP2□□□□□ -2.09
HMGB1P41-201ENST00000520234 FXYD7P58549 80 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 BSPH1Q075Z2 132 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 PDE6HQ13956 83 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 HES1Q14469 280 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 CEMP1Q6PRD7 247 aaPredicted RBP2□□□□□ -2.09
HMGB1P41-201ENST00000520234 LYPD2Q6UXB3 125 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 AMN1Q8IY45 258 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 SLC25A29Q8N8R3 303 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 TMEM75Q8N9X5 138 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 TMEM263Q8WUH6 116 aaKnown RBP2□□□□□ -2.09
HMGB1P41-201ENST00000520234 PLEKHB2Q96CS7 222 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 DPH3Q96FX2 82 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 SHANK2-AS3Q9BTD1 123 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 NXT2Q9NPJ8 142 aaKnown RBP2□□□□□ -2.09
HMGB1P41-201ENST00000520234 C22orf24Q9Y442 160 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 WDR87Q6ZQQ6 2873 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 WNK2Q9Y3S1 2297 aa2□□□□□ -2.09
HMGB1P41-201ENST00000520234 VCANP13611 3396 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 MUC4Q99102 2169 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 GPR179Q6PRD1 2367 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 IGKV2-28A0A075B6P5 120 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 TRAV2A0A0B4J234 112 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 A0A0B4J2C4 111 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 TRBV30A0A0K0K1B3 111 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 TRBV10-2A0A0K0K1G8 114 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 TEX49A0A1B0GTD5 131 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 F8VRH5 84 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 SMKR1H3BMG3 65 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 H3BRN7 92 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 K7EIM0 57 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 IGKV2D-28P01615 120 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 ORM1P02763 201 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 COX7CP15954 63 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 PLNP26678 52 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 NBL1P41271 181 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 CXCL5P42830 114 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 PSMB2P49721 201 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 LYRM7Q5U5X0 104 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 LYZL1Q6UWQ5 148 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 Q8N6K4 173 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 SMCR5Q8TEV8 140 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 DCANP1Q8TF63 244 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 CCL17Q92583 94 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 FOXC2Q99958 501 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 C16orf95Q9H693 158 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 ZNRD1Q9P1U0 126 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 KLK5Q9Y337 293 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 WDFY3Q8IZQ1 3526 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 FRYQ5TBA9 3013 aa1.99□□□□□ -2.09
HMGB1P41-201ENST00000520234 TNRC18O15417 2968 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 ICE1Q9Y2F5 2266 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 ZDBF2Q9HCK1 2354 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 IGLV4-60A0A075B6I1 120 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 A0A0J9YX75 114 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 LOC389332A0A1B0GUA5 103 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 TMEM223A0PJW6 202 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 ODF3BA8MYP8 253 aa1.98□□□□□ -2.09
HMGB1P41-201ENST00000520234 H3BT86 120 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms