RNA–Protein interactions for RNA: ENST00000519177.5

SNTB1-203, Transcript of syntrophin beta 1, humanhuman

TSL 1 (best)

Gene SNTB1, Length 1,962 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-203ENST00000519177 C16orf74Q96GX8 76 aa13.42□□□□□ -0.26
SNTB1-203ENST00000519177 OPRPNQ99935 248 aaPredicted RBP13.42□□□□□ -0.26
SNTB1-203ENST00000519177 EMP1P54849 157 aa13.41□□□□□ -0.26
SNTB1-203ENST00000519177 ZNRF2Q8NHG8 242 aa13.41□□□□□ -0.26
SNTB1-203ENST00000519177 TAL2Q16559 108 aa13.41□□□□□ -0.26
SNTB1-203ENST00000519177 Q6ZTI0 123 aa13.41□□□□□ -0.26
SNTB1-203ENST00000519177 TRAV4A0A0B4J268 109 aa13.4□□□□□ -0.26
SNTB1-203ENST00000519177 H3BRM9 83 aa13.4□□□□□ -0.26
SNTB1-203ENST00000519177 CRYBA4P53673 196 aa13.4□□□□□ -0.26
SNTB1-203ENST00000519177 CHCHD7Q9BUK0 85 aa13.4□□□□□ -0.26
SNTB1-203ENST00000519177 VCX2Q9H322 139 aa13.4□□□□□ -0.26
SNTB1-203ENST00000519177 PLAC8L1A1L4L8 177 aa13.4□□□□□ -0.27
SNTB1-203ENST00000519177 CRLF1O75462 422 aa13.4□□□□□ -0.27
SNTB1-203ENST00000519177 ZNF479Q96JC4 524 aa13.4□□□□□ -0.27
SNTB1-203ENST00000519177 TM2D2Q9BX73 214 aa13.4□□□□□ -0.27
SNTB1-203ENST00000519177 GCSHP23434 173 aa13.39□□□□□ -0.27
SNTB1-203ENST00000519177 NOTCH2Q04721 2471 aa13.39□□□□□ -0.27
SNTB1-203ENST00000519177 UBE2V1Q13404 147 aa13.39□□□□□ -0.27
SNTB1-203ENST00000519177 NOP10Q9NPE3 64 aaKnown RBP13.39□□□□□ -0.27
SNTB1-203ENST00000519177 INSL3P51460 131 aa13.38□□□□□ -0.27
SNTB1-203ENST00000519177 CEND1Q8N111 149 aa13.38□□□□□ -0.27
SNTB1-203ENST00000519177 AMELXQ99217 191 aa13.38□□□□□ -0.27
SNTB1-203ENST00000519177 TRBV10-1A0A0K0K1A3 114 aa13.38□□□□□ -0.27
SNTB1-203ENST00000519177 COTL1Q14019 142 aa13.38□□□□□ -0.27
SNTB1-203ENST00000519177 TMEM170BQ5T4T1 132 aa13.38□□□□□ -0.27
SNTB1-203ENST00000519177 FAM104AQ969W3 186 aa13.38□□□□□ -0.27
SNTB1-203ENST00000519177 SPANXA1Q9NS26 97 aa13.38□□□□□ -0.27
SNTB1-203ENST00000519177 FXYD2P54710 66 aa13.37□□□□□ -0.27
SNTB1-203ENST00000519177 VAMP3Q15836 100 aa13.37□□□□□ -0.27
SNTB1-203ENST00000519177 OVOL2Q9BRP0 275 aa13.37□□□□□ -0.27
SNTB1-203ENST00000519177 NSD1Q96L73 2696 aaPredicted RBP13.37□□□□□ -0.27
SNTB1-203ENST00000519177 RRN3P1Q2M238 152 aa13.36□□□□□ -0.27
SNTB1-203ENST00000519177 TRBV7-3A0A075B6L6 115 aa13.36□□□□□ -0.27
SNTB1-203ENST00000519177 ZNF815PA8K554 130 aa13.36□□□□□ -0.27
SNTB1-203ENST00000519177 K7EQD1 137 aa13.36□□□□□ -0.27
SNTB1-203ENST00000519177 PTTG1IPP53801 180 aa13.36□□□□□ -0.27
SNTB1-203ENST00000519177 PHLDA1Q8WV24 401 aaPredicted RBP13.36□□□□□ -0.27
SNTB1-203ENST00000519177 UBE2D4Q9Y2X8 147 aa13.36□□□□□ -0.27
SNTB1-203ENST00000519177 IGHV3-38A0A0C4DH36 116 aa13.35□□□□□ -0.27
SNTB1-203ENST00000519177 C9orf118A6NHY6 69 aa13.35□□□□□ -0.27
SNTB1-203ENST00000519177 CCL25O15444 150 aa13.35□□□□□ -0.27
SNTB1-203ENST00000519177 C9orf66Q5T8R8 295 aa13.35□□□□□ -0.27
SNTB1-203ENST00000519177 CIDEAO60543 219 aa13.34□□□□□ -0.27
SNTB1-203ENST00000519177 RPL36AP83881 106 aaKnown RBP13.34□□□□□ -0.27
SNTB1-203ENST00000519177 RPL36ALQ969Q0 106 aaKnown RBP13.34□□□□□ -0.27
SNTB1-203ENST00000519177 HIST1H4GQ99525 98 aa13.34□□□□□ -0.27
SNTB1-203ENST00000519177 A0A0J9YXV3 536 aa13.33□□□□□ -0.28
SNTB1-203ENST00000519177 TMEM223A0PJW6 202 aa13.33□□□□□ -0.28
SNTB1-203ENST00000519177 K7EP13 123 aa13.33□□□□□ -0.28
SNTB1-203ENST00000519177 SMIM13P0DJ93 91 aa13.33□□□□□ -0.28
SNTB1-203ENST00000519177 ZNF22P17026 224 aaPredicted RBP13.33□□□□□ -0.28
SNTB1-203ENST00000519177 CEMP1Q6PRD7 247 aaPredicted RBP13.33□□□□□ -0.28
SNTB1-203ENST00000519177 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.32□□□□□ -0.28
SNTB1-203ENST00000519177 IGKV2-29A2NJV5 120 aaPredicted RBP13.32□□□□□ -0.28
SNTB1-203ENST00000519177 CITED1Q99966 193 aa13.32□□□□□ -0.28
SNTB1-203ENST00000519177 JMJD1CQ15652 2540 aa13.32□□□□□ -0.28
SNTB1-203ENST00000519177 FN1P02751 2386 aaKnown RBP13.32□□□□□ -0.28
SNTB1-203ENST00000519177 MRPS36P82909 103 aaKnown RBP13.32□□□□□ -0.28
SNTB1-203ENST00000519177 AMMECR1LQ6DCA0 310 aa13.32□□□□□ -0.28
SNTB1-203ENST00000519177 DAZ4Q86SG3 579 aaKnown RBP13.32□□□□□ -0.28
SNTB1-203ENST00000519177 SLC25A29Q8N8R3 303 aa13.32□□□□□ -0.28
SNTB1-203ENST00000519177 DAZ3Q9NR90 486 aaKnown RBP13.32□□□□□ -0.28
SNTB1-203ENST00000519177 GAGE12BA1L429 117 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 GAGE7O76087 117 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 GAGE12FP0CL80 117 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 GAGE12GP0CL81 117 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 GAGE12IP0CL82 117 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.31□□□□□ -0.28
SNTB1-203ENST00000519177 TIMM21Q9BVV7 248 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 HIVEP1P15822 2718 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 C2CD3Q4AC94 2353 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 TRGV2A0A075B6R0 118 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 LEPROTO15243 131 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 TSPEAR-AS2P59090 65 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 UBE2D3P61077 147 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 UBE2D2P62837 147 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 SCGB1D4Q6XE38 83 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 SPATA3Q8NHX4 192 aa13.31□□□□□ -0.28
SNTB1-203ENST00000519177 J3QQQ9 107 aa13.3□□□□□ -0.28
SNTB1-203ENST00000519177 PLEKHB2Q96CS7 222 aa13.3□□□□□ -0.28
SNTB1-203ENST00000519177 RAB37Q96AX2 223 aa13.29□□□□□ -0.28
SNTB1-203ENST00000519177 TRBV6-4A0A1B0GX49 114 aa13.28□□□□□ -0.28
SNTB1-203ENST00000519177 H3BUT2 72 aa13.28□□□□□ -0.28
SNTB1-203ENST00000519177 LGALS3P17931 250 aaKnown RBP13.28□□□□□ -0.28
SNTB1-203ENST00000519177 Q6ZUT4 128 aa13.28□□□□□ -0.28
SNTB1-203ENST00000519177 NHP2Q9NX24 153 aaKnown RBP13.28□□□□□ -0.28
SNTB1-203ENST00000519177 TINCRA0A1B0GVN0 87 aa13.27□□□□□ -0.28
SNTB1-203ENST00000519177 A0A0J9YY99 117 aa13.27□□□□□ -0.29
SNTB1-203ENST00000519177 GAGE12JA6NER3 117 aa13.27□□□□□ -0.29
SNTB1-203ENST00000519177 GAGE4Q13068 117 aa13.27□□□□□ -0.29
SNTB1-203ENST00000519177 GAGE5Q13069 117 aa13.27□□□□□ -0.29
SNTB1-203ENST00000519177 GAGE13Q4V321 117 aa13.27□□□□□ -0.29
SNTB1-203ENST00000519177 RNASE13Q5GAN3 156 aaKnown RBP13.27□□□□□ -0.29
SNTB1-203ENST00000519177 OR5A1Q8NGJ0 315 aa13.26□□□□□ -0.29
SNTB1-203ENST00000519177 K7ERJ3 54 aa13.25□□□□□ -0.29
SNTB1-203ENST00000519177 NTM-AS1Q6ZSK4 140 aa13.25□□□□□ -0.29
SNTB1-203ENST00000519177 C12orf74Q32Q52 190 aa13.25□□□□□ -0.29
SNTB1-203ENST00000519177 GTSF1LQ9H1H1 148 aa13.25□□□□□ -0.29
SNTB1-203ENST00000519177 SPANXB1Q9NS25 103 aaPredicted RBP13.25□□□□□ -0.29
SNTB1-203ENST00000519177 TRGV4A0A0C4DH28 118 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms