RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 SETXQ7Z333 2677 aaKnown RBP6.16□□□□□ -1.42
CTNNA1-210ENST00000518825 GAGE12HA6NDE8 117 aa6.16□□□□□ -1.42
CTNNA1-210ENST00000518825 TCL1BO95988 128 aa6.16□□□□□ -1.42
CTNNA1-210ENST00000518825 DEFB131AP59861 70 aa6.16□□□□□ -1.42
CTNNA1-210ENST00000518825 FHL3Q13643 280 aa6.16□□□□□ -1.42
CTNNA1-210ENST00000518825 J3QLI3 93 aa6.16□□□□□ -1.42
CTNNA1-210ENST00000518825 EDA2RQ9HAV5 297 aa6.16□□□□□ -1.42
CTNNA1-210ENST00000518825 LOC107984156A0A0G2JMH3 177 aa6.15□□□□□ -1.42
CTNNA1-210ENST00000518825 LEPROTO15243 131 aa6.15□□□□□ -1.42
CTNNA1-210ENST00000518825 PSMB2P49721 201 aa6.15□□□□□ -1.42
CTNNA1-210ENST00000518825 RNASE13Q5GAN3 156 aaKnown RBP6.15□□□□□ -1.42
CTNNA1-210ENST00000518825 ARL17AQ8IVW1 177 aa6.15□□□□□ -1.42
CTNNA1-210ENST00000518825 TMEM61Q8N0U2 210 aa6.15□□□□□ -1.42
CTNNA1-210ENST00000518825 SPATA25Q9BR10 227 aa6.15□□□□□ -1.42
CTNNA1-210ENST00000518825 DLX4Q92988 240 aaPredicted RBP6.15□□□□□ -1.43
CTNNA1-210ENST00000518825 BBC3Q96PG8 261 aaPredicted RBP6.15□□□□□ -1.43
CTNNA1-210ENST00000518825 LITAFQ99732 161 aa6.15□□□□□ -1.43
CTNNA1-210ENST00000518825 SMIM20Q8N5G0 67 aa6.15□□□□□ -1.43
CTNNA1-210ENST00000518825 ITPR3Q14573 2671 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 TRGV11A0A075B6L2 103 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 A4D1N5 150 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 ADARB2-AS1A8MUL3 147 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 CD28P10747 220 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 C11orf72Q8NBR9 251 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 CARD19Q96LW7 228 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 CHCHD7Q9BUK0 85 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 TRAV8-3A0A0A6YYJ7 113 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 A8MZ25 164 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 PF4P02776 101 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 LGALS3P17931 250 aaKnown RBP6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 FOXI1Q12951 378 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 Q8N2B8 174 aa6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 TMEM263Q8WUH6 116 aaKnown RBP6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 PRRC2AP48634 2157 aaKnown RBP6.14□□□□□ -1.43
CTNNA1-210ENST00000518825 MRPS36P82909 103 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 MUSTN1Q8IVN3 82 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 GEMIN7Q9H840 131 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 PYGO1Q9Y3Y4 419 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 IGHV3-30-3P0DP02 117 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 ZNF418Q8TF45 676 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 SIGMAR1Q99720 223 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 SPXQ9BT56 116 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 C1QTNF4Q9BXJ3 329 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 VCX2Q9H322 139 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 ANK3Q12955 4377 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 A0A0J9YXY3 114 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 M0R2P5 195 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 SBSPONQ8IVN8 264 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 RAX2Q96IS3 184 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 CDIP1Q9H305 208 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 PRO1854Q9UHT4 67 aa6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 SONP18583 2426 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-210ENST00000518825 IGHV3-33P01772 117 aa6.12□□□□□ -1.43
CTNNA1-210ENST00000518825 ADAMTSL4-AS1Q5T5F5 129 aa6.12□□□□□ -1.43
CTNNA1-210ENST00000518825 MAP6D1Q9H9H5 199 aa6.12□□□□□ -1.43
CTNNA1-210ENST00000518825 TENM4Q6N022 2769 aa6.12□□□□□ -1.43
CTNNA1-210ENST00000518825 UBE2D4Q9Y2X8 147 aa6.12□□□□□ -1.43
CTNNA1-210ENST00000518825 TRAV2A0A0B4J234 112 aa6.12□□□□□ -1.43
CTNNA1-210ENST00000518825 KRTAP1-3Q8IUG1 177 aa6.12□□□□□ -1.43
CTNNA1-210ENST00000518825 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-210ENST00000518825 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-210ENST00000518825 IGHV3-38A0A0C4DH36 116 aa6.11□□□□□ -1.43
CTNNA1-210ENST00000518825 IGKV2-29A2NJV5 120 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-210ENST00000518825 LINC00467Q9BRT7 94 aa6.11□□□□□ -1.43
CTNNA1-210ENST00000518825 DEFB114Q30KQ6 69 aa6.11□□□□□ -1.43
CTNNA1-210ENST00000518825 ATP6V0E2Q8NHE4 81 aa6.11□□□□□ -1.43
CTNNA1-210ENST00000518825 SETD2Q9BYW2 2564 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-210ENST00000518825 Q6ZUT4 128 aa6.1□□□□□ -1.43
CTNNA1-210ENST00000518825 C4orf3Q8WVX3 66 aa6.1□□□□□ -1.43
CTNNA1-210ENST00000518825 A8MWV9 139 aa6.1□□□□□ -1.43
CTNNA1-210ENST00000518825 BEAN1Q3B7T3 259 aa6.1□□□□□ -1.43
CTNNA1-210ENST00000518825 Q6ZSV7 163 aa6.1□□□□□ -1.43
CTNNA1-210ENST00000518825 TNFRSF18Q9Y5U5 241 aa6.1□□□□□ -1.43
CTNNA1-210ENST00000518825 JMJD1CQ15652 2540 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 A0A0B4J2C4 111 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 ODF3L2Q3SX64 289 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 VSIG2Q96IQ7 327 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 TIMM21Q9BVV7 248 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 FLNAP21333 2647 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 TRBV20-1A0A075B6N2 111 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 IGHV1-58A0A0C4DH39 117 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 B5MCH6 92 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 J3QR89 54 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 IGHV3-53P01767 116 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 SPINK8P0C7L1 97 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 PIK3CD-AS1Q5SR53 167 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 TEN1Q86WV5 123 aa6.09□□□□□ -1.43
CTNNA1-210ENST00000518825 PDZD2O15018 2839 aa6.08□□□□□ -1.44
CTNNA1-210ENST00000518825 TINCRA0A1B0GVN0 87 aa6.08□□□□□ -1.44
CTNNA1-210ENST00000518825 H7C2G1 150 aa6.08□□□□□ -1.44
CTNNA1-210ENST00000518825 ZNF415Q09FC8 603 aa6.08□□□□□ -1.44
CTNNA1-210ENST00000518825 ANKRD29Q8N6D5 301 aa6.08□□□□□ -1.44
CTNNA1-210ENST00000518825 LINC01587Q99440 93 aa6.08□□□□□ -1.44
CTNNA1-210ENST00000518825 WNK1Q9H4A3 2382 aa6.08□□□□□ -1.44
CTNNA1-210ENST00000518825 COX6A2Q02221 97 aa6.08□□□□□ -1.44
CTNNA1-210ENST00000518825 C1orf158Q8N1D5 194 aa6.08□□□□□ -1.44
CTNNA1-210ENST00000518825 RS1O15537 224 aa6.08□□□□□ -1.44
CTNNA1-210ENST00000518825 DEFB113Q30KQ7 82 aa6.08□□□□□ -1.44
CTNNA1-210ENST00000518825 IL17DQ8TAD2 202 aa6.08□□□□□ -1.44
CTNNA1-210ENST00000518825 Q96MF0 132 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms