RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 FAM231CP0DMU5 169 aa13.52□□□□□ -0.25
SDC2-202ENST00000518385 LGALS3P17931 250 aaKnown RBP13.52□□□□□ -0.25
SDC2-202ENST00000518385 SLURP1P55000 103 aa13.52□□□□□ -0.25
SDC2-202ENST00000518385 KLHL30-AS1Q8NEE0 82 aa13.52□□□□□ -0.25
SDC2-202ENST00000518385 TSHBP01222 138 aa13.51□□□□□ -0.25
SDC2-202ENST00000518385 ZNF688P0C7X2 276 aa13.51□□□□□ -0.25
SDC2-202ENST00000518385 PROK1P58294 105 aa13.51□□□□□ -0.25
SDC2-202ENST00000518385 CDIP1Q9H305 208 aa13.51□□□□□ -0.25
SDC2-202ENST00000518385 SDHAF1A6NFY7 115 aa13.5□□□□□ -0.25
SDC2-202ENST00000518385 J3QQQ9 107 aa13.5□□□□□ -0.25
SDC2-202ENST00000518385 KHDC1LQ5JSQ8 128 aa13.5□□□□□ -0.25
SDC2-202ENST00000518385 SUMO4Q6EEV6 95 aa13.5□□□□□ -0.25
SDC2-202ENST00000518385 C18orf65Q6ZTR6 163 aa13.5□□□□□ -0.25
SDC2-202ENST00000518385 MDFICQ9P1T7 246 aa13.5□□□□□ -0.25
SDC2-202ENST00000518385 CD28P10747 220 aa13.49□□□□□ -0.25
SDC2-202ENST00000518385 TRPT1Q86TN4 253 aaKnown RBP13.49□□□□□ -0.25
SDC2-202ENST00000518385 EDA2RQ9HAV5 297 aa13.49□□□□□ -0.25
SDC2-202ENST00000518385 CFC1BP0CG36 223 aa13.49□□□□□ -0.25
SDC2-202ENST00000518385 CFC1P0CG37 223 aa13.49□□□□□ -0.25
SDC2-202ENST00000518385 DEFB1P60022 68 aa13.49□□□□□ -0.25
SDC2-202ENST00000518385 DEFB136Q30KP8 78 aa13.49□□□□□ -0.25
SDC2-202ENST00000518385 Q6ZQT7 251 aa13.49□□□□□ -0.25
SDC2-202ENST00000518385 C9orf85Q96MD7 179 aa13.49□□□□□ -0.25
SDC2-202ENST00000518385 TRAV25A0A0B4J276 109 aa13.48□□□□□ -0.25
SDC2-202ENST00000518385 GNRH2O43555 120 aa13.48□□□□□ -0.25
SDC2-202ENST00000518385 SPINK8P0C7L1 97 aa13.48□□□□□ -0.25
SDC2-202ENST00000518385 FHL3Q13643 280 aa13.47□□□□□ -0.25
SDC2-202ENST00000518385 Q6ZUT4 128 aa13.47□□□□□ -0.25
SDC2-202ENST00000518385 TCL1BO95988 128 aa13.46□□□□□ -0.25
SDC2-202ENST00000518385 INSL3P51460 131 aa13.46□□□□□ -0.25
SDC2-202ENST00000518385 TMEM170BQ5T4T1 132 aa13.46□□□□□ -0.25
SDC2-202ENST00000518385 C11orf44Q8N8P7 122 aa13.46□□□□□ -0.25
SDC2-202ENST00000518385 DYNLRB2Q8TF09 96 aa13.46□□□□□ -0.25
SDC2-202ENST00000518385 AMELXQ99217 191 aa13.46□□□□□ -0.25
SDC2-202ENST00000518385 CITED2Q99967 270 aaPredicted RBP13.46□□□□□ -0.25
SDC2-202ENST00000518385 TMEM223A0PJW6 202 aa13.45□□□□□ -0.26
SDC2-202ENST00000518385 A8MTW9 85 aa13.45□□□□□ -0.26
SDC2-202ENST00000518385 J3KRW8 73 aa13.45□□□□□ -0.26
SDC2-202ENST00000518385 SPANXA1Q9NS26 97 aa13.45□□□□□ -0.26
SDC2-202ENST00000518385 SCGB1C2P0DMR2 95 aa13.45□□□□□ -0.26
SDC2-202ENST00000518385 DEFB114Q30KQ6 69 aa13.45□□□□□ -0.26
SDC2-202ENST00000518385 HIST2H2BDQ6DRA6 164 aa13.45□□□□□ -0.26
SDC2-202ENST00000518385 GEMIN7Q9H840 131 aaKnown RBP13.45□□□□□ -0.26
SDC2-202ENST00000518385 ZNF256Q9Y2P7 627 aaPredicted RBP13.45□□□□□ -0.26
SDC2-202ENST00000518385 CCL24O00175 119 aa13.44□□□□□ -0.26
SDC2-202ENST00000518385 RNF183Q96D59 192 aa13.44□□□□□ -0.26
SDC2-202ENST00000518385 RAX2Q96IS3 184 aa13.44□□□□□ -0.26
SDC2-202ENST00000518385 ERG28Q9UKR5 140 aa13.44□□□□□ -0.26
SDC2-202ENST00000518385 PYGO1Q9Y3Y4 419 aa13.44□□□□□ -0.26
SDC2-202ENST00000518385 F5H697 171 aa13.43□□□□□ -0.26
SDC2-202ENST00000518385 CARD19Q96LW7 228 aa13.43□□□□□ -0.26
SDC2-202ENST00000518385 IGHV3-16A0A0C4DH30 117 aa13.42□□□□□ -0.26
SDC2-202ENST00000518385 IGHV3-33P01772 117 aa13.42□□□□□ -0.26
SDC2-202ENST00000518385 ATXN8Q156A1 80 aa13.42□□□□□ -0.26
SDC2-202ENST00000518385 ZNRF2Q8NHG8 242 aa13.42□□□□□ -0.26
SDC2-202ENST00000518385 C2CD3Q4AC94 2353 aa13.42□□□□□ -0.26
SDC2-202ENST00000518385 A0A1W2PRX2 142 aa13.41□□□□□ -0.26
SDC2-202ENST00000518385 I3L3M4 83 aa13.41□□□□□ -0.26
SDC2-202ENST00000518385 M0QY20 66 aa13.41□□□□□ -0.26
SDC2-202ENST00000518385 SLC25A20O43772 301 aa13.41□□□□□ -0.26
SDC2-202ENST00000518385 KRTAP10-3P60369 221 aa13.41□□□□□ -0.26
SDC2-202ENST00000518385 TMEM61Q8N0U2 210 aa13.41□□□□□ -0.26
SDC2-202ENST00000518385 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.41□□□□□ -0.26
SDC2-202ENST00000518385 C20orf203Q8NBC4 194 aa13.41□□□□□ -0.26
SDC2-202ENST00000518385 TMEM263Q8WUH6 116 aaKnown RBP13.41□□□□□ -0.26
SDC2-202ENST00000518385 DUX3Q96PT4 197 aa13.41□□□□□ -0.26
SDC2-202ENST00000518385 TRGV11A0A075B6L2 103 aa13.41□□□□□ -0.26
SDC2-202ENST00000518385 PIK3CD-AS1Q5SR53 167 aa13.41□□□□□ -0.26
SDC2-202ENST00000518385 CLUHP3Q96NS8 147 aa13.41□□□□□ -0.26
SDC2-202ENST00000518385 TRAV12-3A0A0B4J271 114 aa13.4□□□□□ -0.26
SDC2-202ENST00000518385 TRBV30A0A0K0K1B3 111 aa13.4□□□□□ -0.26
SDC2-202ENST00000518385 M0R2P5 195 aa13.4□□□□□ -0.26
SDC2-202ENST00000518385 RHODO00212 210 aa13.4□□□□□ -0.26
SDC2-202ENST00000518385 TSPEAR-AS2P59090 65 aa13.4□□□□□ -0.26
SDC2-202ENST00000518385 DEFB131AP59861 70 aa13.4□□□□□ -0.26
SDC2-202ENST00000518385 Q6Q795 121 aa13.4□□□□□ -0.26
SDC2-202ENST00000518385 ANKRD29Q8N6D5 301 aa13.4□□□□□ -0.26
SDC2-202ENST00000518385 ADARB2-AS1A8MUL3 147 aa13.39□□□□□ -0.27
SDC2-202ENST00000518385 RPL13AP40429 203 aaKnown RBP13.39□□□□□ -0.27
SDC2-202ENST00000518385 CMC4P56277 68 aaPredicted RBP13.39□□□□□ -0.27
SDC2-202ENST00000518385 MRPL23Q16540 153 aaKnown RBP13.39□□□□□ -0.27
SDC2-202ENST00000518385 ZFAND6Q6FIF0 208 aa13.39□□□□□ -0.27
SDC2-202ENST00000518385 IGHV1OR15-1A0A075B7D0 117 aa13.38□□□□□ -0.27
SDC2-202ENST00000518385 A4D1N5 150 aa13.38□□□□□ -0.27
SDC2-202ENST00000518385 H3BMM0 161 aa13.38□□□□□ -0.27
SDC2-202ENST00000518385 RPL39P62891 51 aaKnown RBP13.38□□□□□ -0.27
SDC2-202ENST00000518385 SETD2Q9BYW2 2564 aaPredicted RBP13.38□□□□□ -0.27
SDC2-202ENST00000518385 ZNF22P17026 224 aaPredicted RBP13.37□□□□□ -0.27
SDC2-202ENST00000518385 XGP55808 180 aa13.37□□□□□ -0.27
SDC2-202ENST00000518385 SPANXDQ9BXN6 97 aa13.37□□□□□ -0.27
SDC2-202ENST00000518385 SPANXCQ9NY87 97 aa13.37□□□□□ -0.27
SDC2-202ENST00000518385 MT-ATP8P03928 68 aa13.37□□□□□ -0.27
SDC2-202ENST00000518385 ZNF56Q15929 161 aa13.37□□□□□ -0.27
SDC2-202ENST00000518385 PTH2Q96A98 100 aa13.37□□□□□ -0.27
SDC2-202ENST00000518385 MAP6D1Q9H9H5 199 aa13.37□□□□□ -0.27
SDC2-202ENST00000518385 IGKV3-20P01619 116 aa13.36□□□□□ -0.27
SDC2-202ENST00000518385 SPINK13Q1W4C9 94 aa13.36□□□□□ -0.27
SDC2-202ENST00000518385 SVIPQ8NHG7 77 aa13.36□□□□□ -0.27
SDC2-202ENST00000518385 NIPBLQ6KC79 2804 aaeCLIP13.35□□□□□ -0.27
SDC2-202ENST00000518385 A0A087WWL8 130 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms