RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 RYR1P21817 5038 aa12.37□□□□□ -0.43
FAM49B-208ENST00000518344 AMTP48728 403 aa12.37□□□□□ -0.43
FAM49B-208ENST00000518344 C1orf43Q9BWL3 253 aa12.37□□□□□ -0.43
FAM49B-208ENST00000518344 UBE2L6O14933 153 aa12.36□□□□□ -0.43
FAM49B-208ENST00000518344 GCSHP23434 173 aa12.36□□□□□ -0.43
FAM49B-208ENST00000518344 CLPSL2Q6UWE3 100 aa12.36□□□□□ -0.43
FAM49B-208ENST00000518344 AMN1Q8IY45 258 aa12.36□□□□□ -0.43
FAM49B-208ENST00000518344 LINC00269Q8N2A0 174 aa12.36□□□□□ -0.43
FAM49B-208ENST00000518344 NTN5Q8WTR8 489 aaPredicted RBP12.36□□□□□ -0.43
FAM49B-208ENST00000518344 SMIM27A0A1W2PRY6 76 aa12.35□□□□□ -0.43
FAM49B-208ENST00000518344 SDHAF1A6NFY7 115 aa12.35□□□□□ -0.43
FAM49B-208ENST00000518344 GAS8-AS1O95177 125 aa12.35□□□□□ -0.43
FAM49B-208ENST00000518344 RAB4AP20338 218 aa12.35□□□□□ -0.43
FAM49B-208ENST00000518344 KRTAP10-1P60331 282 aa12.35□□□□□ -0.43
FAM49B-208ENST00000518344 RNF185Q96GF1 192 aa12.35□□□□□ -0.43
FAM49B-208ENST00000518344 APOBP04114 4563 aaKnown RBP12.35□□□□□ -0.43
FAM49B-208ENST00000518344 HSPG2P98160 4391 aa12.34□□□□□ -0.43
FAM49B-208ENST00000518344 PMCHP20382 165 aa12.34□□□□□ -0.43
FAM49B-208ENST00000518344 CLLU1Q5K131 121 aa12.34□□□□□ -0.43
FAM49B-208ENST00000518344 MIAQ16674 131 aa12.33□□□□□ -0.44
FAM49B-208ENST00000518344 ST20Q9HBF5 79 aa12.33□□□□□ -0.44
FAM49B-208ENST00000518344 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.32□□□□□ -0.44
FAM49B-208ENST00000518344 TRBV6-5A0A0K0K1A5 114 aa12.32□□□□□ -0.44
FAM49B-208ENST00000518344 I3L3M4 83 aa12.32□□□□□ -0.44
FAM49B-208ENST00000518344 CAMPP49913 170 aa12.32□□□□□ -0.44
FAM49B-208ENST00000518344 C20orf203Q8NBC4 194 aa12.32□□□□□ -0.44
FAM49B-208ENST00000518344 MRAP2Q96G30 205 aa12.32□□□□□ -0.44
FAM49B-208ENST00000518344 PRR34Q9NV39 138 aa12.32□□□□□ -0.44
FAM49B-208ENST00000518344 IGLV4-60A0A075B6I1 120 aa12.31□□□□□ -0.44
FAM49B-208ENST00000518344 A0A1B0GUV1 79 aa12.31□□□□□ -0.44
FAM49B-208ENST00000518344 SMKR1H3BMG3 65 aa12.31□□□□□ -0.44
FAM49B-208ENST00000518344 NCR2O95944 276 aa12.31□□□□□ -0.44
FAM49B-208ENST00000518344 APCSP02743 223 aa12.31□□□□□ -0.44
FAM49B-208ENST00000518344 RPS10P46783 165 aaKnown RBP12.31□□□□□ -0.44
FAM49B-208ENST00000518344 REG3AQ06141 175 aa12.31□□□□□ -0.44
FAM49B-208ENST00000518344 MRPL54Q6P161 138 aaKnown RBP12.3□□□□□ -0.44
FAM49B-208ENST00000518344 IGLV10-54A0A075B6I4 117 aa12.29□□□□□ -0.44
FAM49B-208ENST00000518344 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.29□□□□□ -0.44
FAM49B-208ENST00000518344 A0A1B0GW15 77 aa12.29□□□□□ -0.44
FAM49B-208ENST00000518344 IGKV2-29A2NJV5 120 aaPredicted RBP12.29□□□□□ -0.44
FAM49B-208ENST00000518344 HLA-DQA1P01909 254 aa12.29□□□□□ -0.44
FAM49B-208ENST00000518344 IFITM2Q01629 132 aa12.29□□□□□ -0.44
FAM49B-208ENST00000518344 FAM104BQ5XKR9 115 aa12.29□□□□□ -0.44
FAM49B-208ENST00000518344 AMMECR1LQ6DCA0 310 aa12.29□□□□□ -0.44
FAM49B-208ENST00000518344 TMEM70Q9BUB7 260 aa12.29□□□□□ -0.44
FAM49B-208ENST00000518344 MRPL51Q4U2R6 128 aaKnown RBP12.28□□□□□ -0.44
FAM49B-208ENST00000518344 PPP1R2P9O14990 202 aa12.27□□□□□ -0.45
FAM49B-208ENST00000518344 PNRC1Q12796 327 aaPredicted RBP12.27□□□□□ -0.45
FAM49B-208ENST00000518344 RNASEKQ6P5S7 137 aaKnown RBP12.27□□□□□ -0.45
FAM49B-208ENST00000518344 KRTAP17-1Q9BYP8 105 aa12.27□□□□□ -0.45
FAM49B-208ENST00000518344 TMEM242Q9NWH2 141 aa12.27□□□□□ -0.45
FAM49B-208ENST00000518344 POLR2KP53803 58 aaKnown RBP12.26□□□□□ -0.45
FAM49B-208ENST00000518344 IGKV3OR2-268A0A0C4DH90 116 aa12.25□□□□□ -0.45
FAM49B-208ENST00000518344 H7C423 109 aa12.25□□□□□ -0.45
FAM49B-208ENST00000518344 PPP1R17O96001 155 aa12.25□□□□□ -0.45
FAM49B-208ENST00000518344 TSHBP01222 138 aa12.25□□□□□ -0.45
FAM49B-208ENST00000518344 S100A8P05109 93 aa12.25□□□□□ -0.45
FAM49B-208ENST00000518344 XGP55808 180 aa12.25□□□□□ -0.45
FAM49B-208ENST00000518344 HBBP68871 147 aa12.25□□□□□ -0.45
FAM49B-208ENST00000518344 NRACQ8N912 160 aa12.25□□□□□ -0.45
FAM49B-208ENST00000518344 TRAV8-4A0A0B4J246 113 aa12.24□□□□□ -0.45
FAM49B-208ENST00000518344 USP17L23D6RBM5 183 aa12.24□□□□□ -0.45
FAM49B-208ENST00000518344 F8W036 122 aa12.24□□□□□ -0.45
FAM49B-208ENST00000518344 VCYO14598 125 aa12.24□□□□□ -0.45
FAM49B-208ENST00000518344 MT-ND4LP03901 98 aa12.24□□□□□ -0.45
FAM49B-208ENST00000518344 FGF6P10767 208 aa12.24□□□□□ -0.45
FAM49B-208ENST00000518344 CKS2P33552 79 aa12.24□□□□□ -0.45
FAM49B-208ENST00000518344 C14orf177Q52M58 125 aa12.24□□□□□ -0.45
FAM49B-208ENST00000518344 KRTAP26-1Q6PEX3 210 aa12.24□□□□□ -0.45
FAM49B-208ENST00000518344 KRTAP4-5Q9BYR2 181 aa12.24□□□□□ -0.45
FAM49B-208ENST00000518344 TRBV27A0A0K0K1C4 114 aa12.23□□□□□ -0.45
FAM49B-208ENST00000518344 SUMO2P61956 95 aaKnown RBP12.23□□□□□ -0.45
FAM49B-208ENST00000518344 LINC01620Q4KN68 170 aa12.23□□□□□ -0.45
FAM49B-208ENST00000518344 Q8N1X5 172 aa12.23□□□□□ -0.45
FAM49B-208ENST00000518344 ANAPC16Q96DE5 110 aa12.23□□□□□ -0.45
FAM49B-208ENST00000518344 A0A1B0GXF2 115 aa12.22□□□□□ -0.45
FAM49B-208ENST00000518344 LINC00862A6NCI5 91 aa12.22□□□□□ -0.45
FAM49B-208ENST00000518344 ESDP10768 282 aa12.22□□□□□ -0.45
FAM49B-208ENST00000518344 FCER1GP30273 86 aa12.22□□□□□ -0.45
FAM49B-208ENST00000518344 HAMPP81172 84 aa12.22□□□□□ -0.45
FAM49B-208ENST00000518344 TMEM101Q96IK0 257 aa12.22□□□□□ -0.45
FAM49B-208ENST00000518344 BTF3L4Q96K17 158 aa12.22□□□□□ -0.45
FAM49B-208ENST00000518344 UQCC3Q6UW78 93 aa12.21□□□□□ -0.45
FAM49B-208ENST00000518344 FAM30AQ9NZY2 134 aa12.21□□□□□ -0.45
FAM49B-208ENST00000518344 DNAH8Q96JB1 4490 aa12.2□□□□□ -0.46
FAM49B-208ENST00000518344 ZNF25P17030 456 aaPredicted RBP12.2□□□□□ -0.46
FAM49B-208ENST00000518344 ATP5L2Q7Z4Y8 100 aa12.2□□□□□ -0.46
FAM49B-208ENST00000518344 TMEM218A2RU14 115 aa12.19□□□□□ -0.46
FAM49B-208ENST00000518344 C7orf77A4D0Y5 90 aa12.19□□□□□ -0.46
FAM49B-208ENST00000518344 D6R8Y8 96 aa12.19□□□□□ -0.46
FAM49B-208ENST00000518344 TNFRSF6BO95407 300 aa12.19□□□□□ -0.46
FAM49B-208ENST00000518344 PRSS1P07477 247 aa12.19□□□□□ -0.46
FAM49B-208ENST00000518344 OR5A1Q8NGJ0 315 aa12.19□□□□□ -0.46
FAM49B-208ENST00000518344 KIR2DL4Q99706 377 aa12.19□□□□□ -0.46
FAM49B-208ENST00000518344 C20orf78Q9BR46 151 aa12.19□□□□□ -0.46
FAM49B-208ENST00000518344 TRBV24-1A0A075B6N3 115 aa12.18□□□□□ -0.46
FAM49B-208ENST00000518344 GAGE12HA6NDE8 117 aa12.17□□□□□ -0.46
FAM49B-208ENST00000518344 SMR3BP02814 79 aaPredicted RBP12.17□□□□□ -0.46
FAM49B-208ENST00000518344 ADCYAP1P18509 176 aa12.17□□□□□ -0.46
FAM49B-208ENST00000518344 COMMD7Q86VX2 200 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms