RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 TMEM238C9JI98 176 aa-1.92□□□□□ -2.72
RNU6-1088P-201ENST00000516850 PPP1R2P3Q6NXS1 205 aa-1.92□□□□□ -2.72
RNU6-1088P-201ENST00000516850 NWD2Q9ULI1 1742 aa-1.92□□□□□ -2.72
RNU6-1088P-201ENST00000516850 TMEM244Q5VVB8 128 aa-1.93□□□□□ -2.72
RNU6-1088P-201ENST00000516850 VSTM2AQ8TAG5 236 aa-1.93□□□□□ -2.72
RNU6-1088P-201ENST00000516850 LSM2Q9Y333 95 aaKnown RBP-1.93□□□□□ -2.72
RNU6-1088P-201ENST00000516850 NBPF19A0A087WUL8 3843 aa-1.94□□□□□ -2.72
RNU6-1088P-201ENST00000516850 ZNF818PQ6ZRF7 136 aa-1.94□□□□□ -2.72
RNU6-1088P-201ENST00000516850 DNAH6Q9C0G6 4158 aa-1.94□□□□□ -2.72
RNU6-1088P-201ENST00000516850 SBF2Q86WG5 1849 aa-1.95□□□□□ -2.72
RNU6-1088P-201ENST00000516850 PIRTP0C851 137 aa-1.95□□□□□ -2.72
RNU6-1088P-201ENST00000516850 PI4KAP42356 2102 aa-1.95□□□□□ -2.72
RNU6-1088P-201ENST00000516850 CCL18P55774 89 aa-1.95□□□□□ -2.72
RNU6-1088P-201ENST00000516850 TMEM128Q5BJH2 165 aa-1.95□□□□□ -2.72
RNU6-1088P-201ENST00000516850 AGPAT4-IT1Q9H0P7 198 aa-1.96□□□□□ -2.72
RNU6-1088P-201ENST00000516850 R4GMQ9 66 aa-1.96□□□□□ -2.72
RNU6-1088P-201ENST00000516850 DAPK1P53355 1430 aa-1.97□□□□□ -2.72
RNU6-1088P-201ENST00000516850 E5RI56 91 aa-1.97□□□□□ -2.72
RNU6-1088P-201ENST00000516850 TNFP01375 233 aa-1.97□□□□□ -2.72
RNU6-1088P-201ENST00000516850 CTAGE3PQ8IX95 158 aa-1.97□□□□□ -2.72
RNU6-1088P-201ENST00000516850 ZNF236Q9UL36 1845 aa-1.97□□□□□ -2.72
RNU6-1088P-201ENST00000516850 TRBV20-1A0A075B6N2 111 aa-1.98□□□□□ -2.73
RNU6-1088P-201ENST00000516850 CTXND1A0A1B0GTU2 59 aa-1.98□□□□□ -2.73
RNU6-1088P-201ENST00000516850 UBE2G1P62253 170 aa-1.98□□□□□ -2.73
RNU6-1088P-201ENST00000516850 S100GP29377 79 aa-1.99□□□□□ -2.73
RNU6-1088P-201ENST00000516850 TCTE3Q8IZS6 198 aa-1.99□□□□□ -2.73
RNU6-1088P-201ENST00000516850 DEFB105AQ8NG35 78 aa-1.99□□□□□ -2.73
RNU6-1088P-201ENST00000516850 MAFIPQ8WZ33 124 aa-1.99□□□□□ -2.73
RNU6-1088P-201ENST00000516850 SAR1AQ9NR31 198 aa-1.99□□□□□ -2.73
RNU6-1088P-201ENST00000516850 LINC00312Q9Y6C7 94 aa-1.99□□□□□ -2.73
RNU6-1088P-201ENST00000516850 M0R135 149 aa-2□□□□□ -2.73
RNU6-1088P-201ENST00000516850 NCS1P62166 190 aa-2□□□□□ -2.73
RNU6-1088P-201ENST00000516850 RPS28P62857 69 aaKnown RBP-2□□□□□ -2.73
RNU6-1088P-201ENST00000516850 Q6JHZ5 121 aa-2□□□□□ -2.73
RNU6-1088P-201ENST00000516850 SPTSSBQ8NFR3 76 aa-2□□□□□ -2.73
RNU6-1088P-201ENST00000516850 MYH6P13533 1939 aa-2□□□□□ -2.73
RNU6-1088P-201ENST00000516850 PXDNQ92626 1479 aa-2.01□□□□□ -2.73
RNU6-1088P-201ENST00000516850 CDK5RAP2Q96SN8 1893 aa-2.01□□□□□ -2.73
RNU6-1088P-201ENST00000516850 TRAV36DV7A0A075B6V5 113 aa-2.01□□□□□ -2.73
RNU6-1088P-201ENST00000516850 A0A1B0GV72 72 aa-2.01□□□□□ -2.73
RNU6-1088P-201ENST00000516850 E2F6O75461 281 aa-2.01□□□□□ -2.73
RNU6-1088P-201ENST00000516850 PPP1R17O96001 155 aa-2.01□□□□□ -2.73
RNU6-1088P-201ENST00000516850 G0S2P27469 103 aa-2.01□□□□□ -2.73
RNU6-1088P-201ENST00000516850 CMPK1P30085 196 aa-2.01□□□□□ -2.73
RNU6-1088P-201ENST00000516850 TMEM170BQ5T4T1 132 aa-2.01□□□□□ -2.73
RNU6-1088P-201ENST00000516850 SKA2Q8WVK7 121 aaPredicted RBP-2.01□□□□□ -2.73
RNU6-1088P-201ENST00000516850 SCTP09683 121 aa-2.02□□□□□ -2.73
RNU6-1088P-201ENST00000516850 PIPP12273 146 aaPredicted RBP-2.02□□□□□ -2.73
RNU6-1088P-201ENST00000516850 COX17Q14061 63 aa-2.02□□□□□ -2.73
RNU6-1088P-201ENST00000516850 DEFB135Q30KP9 77 aa-2.02□□□□□ -2.73
RNU6-1088P-201ENST00000516850 MIC13Q5XKP0 118 aa-2.02□□□□□ -2.73
RNU6-1088P-201ENST00000516850 DEFB123Q8N688 67 aa-2.02□□□□□ -2.73
RNU6-1088P-201ENST00000516850 DOCK1Q14185 1865 aa-2.03□□□□□ -2.73
RNU6-1088P-201ENST00000516850 DOPEY1Q5JWR5 2465 aa-2.03□□□□□ -2.73
RNU6-1088P-201ENST00000516850 TNFSF15O95150 251 aa-2.03□□□□□ -2.73
RNU6-1088P-201ENST00000516850 TFAMQ00059 246 aaKnown RBP-2.03□□□□□ -2.73
RNU6-1088P-201ENST00000516850 MRPL40Q9NQ50 206 aaKnown RBP-2.03□□□□□ -2.73
RNU6-1088P-201ENST00000516850 MRC1P22897 1456 aa-2.03□□□□□ -2.73
RNU6-1088P-201ENST00000516850 GAPVD1Q14C86 1478 aa-2.03□□□□□ -2.73
RNU6-1088P-201ENST00000516850 GOLGA4Q13439 2230 aaKnown RBP-2.03□□□□□ -2.74
RNU6-1088P-201ENST00000516850 ARHGEF10O15013 1369 aa-2.04□□□□□ -2.74
RNU6-1088P-201ENST00000516850 CBLN1P23435 193 aa-2.04□□□□□ -2.74
RNU6-1088P-201ENST00000516850 CASKIN1Q8WXD9 1431 aa-2.04□□□□□ -2.74
RNU6-1088P-201ENST00000516850 DOCK2Q92608 1830 aa-2.04□□□□□ -2.74
RNU6-1088P-201ENST00000516850 HIGD1AQ9Y241 93 aa-2.04□□□□□ -2.74
RNU6-1088P-201ENST00000516850 KIF21AQ7Z4S6 1674 aa-2.05□□□□□ -2.74
RNU6-1088P-201ENST00000516850 EPG5Q9HCE0 2579 aa-2.05□□□□□ -2.74
RNU6-1088P-201ENST00000516850 A0A1B0GX51 115 aa-2.05□□□□□ -2.74
RNU6-1088P-201ENST00000516850 IL5P05113 134 aa-2.05□□□□□ -2.74
RNU6-1088P-201ENST00000516850 GNG10P50151 68 aa-2.05□□□□□ -2.74
RNU6-1088P-201ENST00000516850 CCL8P80075 99 aa-2.05□□□□□ -2.74
RNU6-1088P-201ENST00000516850 LINC00472Q9H8W2 130 aa-2.05□□□□□ -2.74
RNU6-1088P-201ENST00000516850 PBRM1Q86U86 1689 aa-2.06□□□□□ -2.74
RNU6-1088P-201ENST00000516850 SYNJ1O43426 1573 aa-2.06□□□□□ -2.74
RNU6-1088P-201ENST00000516850 SPTBN4Q9H254 2564 aa-2.07□□□□□ -2.74
RNU6-1088P-201ENST00000516850 MMGT1Q8N4V1 131 aa-2.07□□□□□ -2.74
RNU6-1088P-201ENST00000516850 PSMG3Q9BT73 122 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-1088P-201ENST00000516850 S100A7L2Q5SY68 101 aa-2.08□□□□□ -2.74
RNU6-1088P-201ENST00000516850 CENPHQ9H3R5 247 aa-2.08□□□□□ -2.74
RNU6-1088P-201ENST00000516850 SMPXQ9UHP9 88 aa-2.08□□□□□ -2.74
RNU6-1088P-201ENST00000516850 V9GYH0 126 aa-2.08□□□□□ -2.74
RNU6-1088P-201ENST00000516850 NSD3Q9BZ95 1437 aa-2.08□□□□□ -2.74
RNU6-1088P-201ENST00000516850 TMEM2Q9UHN6 1383 aa-2.09□□□□□ -2.74
RNU6-1088P-201ENST00000516850 M0R129 80 aa-2.09□□□□□ -2.74
RNU6-1088P-201ENST00000516850 SNCGO76070 127 aa-2.09□□□□□ -2.74
RNU6-1088P-201ENST00000516850 CDC26Q8NHZ8 85 aa-2.1□□□□□ -2.75
RNU6-1088P-201ENST00000516850 SPTSSAQ969W0 71 aa-2.1□□□□□ -2.75
RNU6-1088P-201ENST00000516850 SEC11CQ9BY50 192 aa-2.1□□□□□ -2.75
RNU6-1088P-201ENST00000516850 SPANXCQ9NY87 97 aa-2.1□□□□□ -2.75
RNU6-1088P-201ENST00000516850 POLA1P09884 1462 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1088P-201ENST00000516850 SPEF2Q9C093 1822 aa-2.1□□□□□ -2.75
RNU6-1088P-201ENST00000516850 USP9YO00507 2555 aaPredicted RBP-2.1□□□□□ -2.75
RNU6-1088P-201ENST00000516850 EPPK1P58107 5090 aaKnown RBP-2.11□□□□□ -2.75
RNU6-1088P-201ENST00000516850 TSTD3H0UI37 97 aa-2.11□□□□□ -2.75
RNU6-1088P-201ENST00000516850 SYS1-DBNDD2H3BUS1 97 aa-2.11□□□□□ -2.75
RNU6-1088P-201ENST00000516850 AQP10Q96PS8 301 aa-2.11□□□□□ -2.75
RNU6-1088P-201ENST00000516850 HSPB11Q9Y547 144 aa-2.11□□□□□ -2.75
RNU6-1088P-201ENST00000516850 LENEPQ9Y5L5 61 aa-2.11□□□□□ -2.75
RNU6-1088P-201ENST00000516850 V9GYQ6 96 aa-2.11□□□□□ -2.75
RNU6-1088P-201ENST00000516850 ADGRB1O14514 1584 aa-2.11□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms