RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 SIX6O95475 246 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SFT2D2O95562 160 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CYB5AP00167 134 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 IGHV3-30P01768 117 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CTSGP08311 255 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 IGHV3-30-5P0DP03 117 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SLC25A6P12236 298 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CNBPP62633 177 aaKnown RBP0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SEC11AP67812 179 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MPV17LQ2QL34 196 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 FAM74A1Q5RGS3 127 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 UNQ5815/PRO19632Q6UWF5 114 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ZNF818PQ6ZRF7 136 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SERP2Q8N6R1 65 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 Q8TAT8 98 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 PATE1Q8WXA2 126 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 S100A16Q96FQ6 103 aaKnown RBP0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 DMAC1Q96GE9 116 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 FAM167A-AS1Q96KT0 104 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LINC01600Q96MT4 127 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LINC00052Q96N35 136 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TIMM21Q9BVV7 248 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ORMDL1Q9P0S3 153 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CACFD1Q9UGQ2 172 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 BLMP54132 1417 aaPredicted RBP0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 EEA1Q15075 1411 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 GOLGA3Q08378 1498 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CDK12Q9NYV4 1490 aaPredicted RBP0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CUX1P39880 1505 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TIAM1Q13009 1591 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SETBP1Q9Y6X0 1596 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TMEM131LA2VDJ0 1609 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 COL4A6Q14031 1691 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 RGPD1P0DJD0 1748 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MYO5CQ9NQX4 1742 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LOC285556D6RIA3 1793 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SIPA1L3O60292 1781 aaPredicted RBP0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 KDM3BQ7LBC6 1761 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 FREM1Q5H8C1 2179 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MED13Q9UHV7 2174 aa0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 RP1L1Q8IWN7 2480 aaPredicted RBP0.52□□□□□ -2.33
SCARNA16.2-201ENST00000516520 IGLV3-32A0A0A0MS00 114 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TRAV12-3A0A0B4J271 114 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TEX49A0A1B0GTD5 131 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TRBV6-4A0A1B0GX49 114 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 KANTRA0A1W2PQU2 76 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 hADV29S1A0JD25 119 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 NUPR2A6NF83 97 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CRYM-AS1A6NIL9 109 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 HIGD1CA8MV81 97 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 HCG22E2RYF7 251 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 H3BRM9 83 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 PDCD5O14737 125 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CCL16O15467 120 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ADGRB2O60241 1585 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 NMBP08949 121 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 COX6CP09669 75 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 UBE2D1P51668 147 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ELOF1P60002 83 aaKnown RBP0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 UBE2D3P61077 147 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 GNG11P61952 73 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 UBE2D2P62837 147 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 RBM3P98179 157 aaKnown RBP0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 KLKP1Q107X0 134 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TARBP1Q13395 1621 aaKnown RBP0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MYO7AQ13402 2215 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ITSN1Q15811 1721 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ADIRFQ15847 76 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LAMA4Q16363 1823 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 C10orf55Q5SWW7 151 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MAGI3Q5TCQ9 1506 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 XAF1Q6GPH4 301 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LYPD5Q6UWN5 251 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CYP2G1PQ6ZSU1 146 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ZNF720Q7Z2F6 126 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 VMO1Q7Z5L0 202 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 Q86TA4 180 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 IQGAP3Q86VI3 1631 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ABCA9Q8IUA7 1624 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CLECL1Q8IZS7 167 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 EHBP1L1Q8N3D4 1523 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 CTTNBP2Q8WZ74 1663 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 DOCK10Q96BY6 2186 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ODF3Q96PU9 254 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 AMELXQ99217 191 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 AMELYQ99218 206 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 C20orf78Q9BR46 151 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 LIMD2Q9BT23 127 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ST20Q9HBF5 79 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 SMCO4Q9NRQ5 59 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 UGGT2Q9NYU1 1516 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 TENM3Q9P273 2699 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 PRO1854Q9UHT4 67 aa0.51□□□□□ -2.33
SCARNA16.2-201ENST00000516520 MYO7BQ6PIF6 2116 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ANKRD36A6QL64 1941 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 GBF1Q92538 1859 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ARFGEF1Q9Y6D6 1849 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 ARFGEF2Q9Y6D5 1785 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 NUP188Q5SRE5 1749 aa0.5□□□□□ -2.33
SCARNA16.2-201ENST00000516520 PLCH1Q4KWH8 1693 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms