RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 SLC50A1Q9BRV3 221 aa4.41□□□□□ -1.7
NPHP3-211ENST00000515289 ZFP30Q9Y2G7 519 aa4.41□□□□□ -1.7
NPHP3-211ENST00000515289 APCP25054 2843 aa4.4□□□□□ -1.7
NPHP3-211ENST00000515289 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.4□□□□□ -1.71
NPHP3-211ENST00000515289 ZNF705FA8MVS1 300 aaPredicted RBP4.4□□□□□ -1.71
NPHP3-211ENST00000515289 PMAIP1Q13794 54 aa4.4□□□□□ -1.71
NPHP3-211ENST00000515289 FAM104BQ5XKR9 115 aa4.4□□□□□ -1.71
NPHP3-211ENST00000515289 TCF24Q7RTU0 167 aa4.4□□□□□ -1.71
NPHP3-211ENST00000515289 LINC00612Q8N6U2 182 aa4.4□□□□□ -1.71
NPHP3-211ENST00000515289 NUP35Q8NFH5 326 aa4.4□□□□□ -1.71
NPHP3-211ENST00000515289 OR4B1Q8NGF8 309 aa4.4□□□□□ -1.71
NPHP3-211ENST00000515289 TP53TG3Q9ULZ0 132 aa4.4□□□□□ -1.71
NPHP3-211ENST00000515289 TRAPPC1Q9Y5R8 145 aa4.4□□□□□ -1.71
NPHP3-211ENST00000515289 VPS13CQ709C8 3753 aa4.4□□□□□ -1.71
NPHP3-211ENST00000515289 TENM4Q6N022 2769 aa4.4□□□□□ -1.71
NPHP3-211ENST00000515289 ANK3Q12955 4377 aaKnown RBP4.39□□□□□ -1.71
NPHP3-211ENST00000515289 RBAKDNA6NC62 111 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 HIGD1CA8MV81 97 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 SH2D1AO60880 128 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 MT-ND6P03923 174 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 S100A8P05109 93 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 LGALS1P09382 135 aaKnown RBP4.39□□□□□ -1.71
NPHP3-211ENST00000515289 CSN1S1P47710 185 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 AKR1D1P51857 326 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 FOXA3P55318 350 aaPredicted RBP4.39□□□□□ -1.71
NPHP3-211ENST00000515289 DEFB116Q30KQ4 102 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 MRPL54Q6P161 138 aaKnown RBP4.39□□□□□ -1.71
NPHP3-211ENST00000515289 RASL11AQ6T310 242 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 RNF182Q8N6D2 247 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 TEX29Q8N6K0 151 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 Q8TAT8 98 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 SIGMAR1Q99720 223 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 NDFIP1Q9BT67 221 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 NAT8BQ9UHF3 227 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 CRYBG3Q68DQ2 2970 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 SVEP1Q4LDE5 3571 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 CELSR2Q9HCU4 2923 aa4.39□□□□□ -1.71
NPHP3-211ENST00000515289 CSMD2Q7Z408 3487 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 HELZ2Q9BYK8 2649 aaKnown RBP4.38□□□□□ -1.71
NPHP3-211ENST00000515289 A8MWP6 167 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 PANO1I0J062 215 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 SPINK4O60575 86 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 SMIM6P0DI80 62 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 GZMBP10144 247 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 ZNF80P51504 273 aaPredicted RBP4.38□□□□□ -1.71
NPHP3-211ENST00000515289 DSCR10P59022 87 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 EBLN2Q6P2I7 272 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 OR2D3Q8NGH3 330 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 HIST1H2BLQ99880 126 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 RHPN1-AS1Q9BWJ2 59 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 SMPXQ9UHP9 88 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 ZANQ9Y493 2812 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 CSMD1Q96PZ7 3565 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 ITPR3Q14573 2671 aa4.38□□□□□ -1.71
NPHP3-211ENST00000515289 PDZD2O15018 2839 aa4.37□□□□□ -1.71
NPHP3-211ENST00000515289 NBPF19A0A087WUL8 3843 aa4.37□□□□□ -1.71
NPHP3-211ENST00000515289 UNC79Q9P2D8 2635 aa4.37□□□□□ -1.71
NPHP3-211ENST00000515289 CENPEQ02224 2701 aa4.37□□□□□ -1.71
NPHP3-211ENST00000515289 F2Z2F3 143 aa4.37□□□□□ -1.71
NPHP3-211ENST00000515289 NUPR1O60356 82 aa4.37□□□□□ -1.71
NPHP3-211ENST00000515289 ESDP10768 282 aa4.37□□□□□ -1.71
NPHP3-211ENST00000515289 HERVK_113P63121 156 aa4.37□□□□□ -1.71
NPHP3-211ENST00000515289 Q0VG73 95 aa4.37□□□□□ -1.71
NPHP3-211ENST00000515289 DEFB125Q8N687 156 aa4.37□□□□□ -1.71
NPHP3-211ENST00000515289 AGPAT4-IT1Q9H0P7 198 aa4.37□□□□□ -1.71
NPHP3-211ENST00000515289 DAZ1Q9NQZ3 744 aaKnown RBP4.37□□□□□ -1.71
NPHP3-211ENST00000515289 CCDC168Q8NDH2 2452 aa4.37□□□□□ -1.71
NPHP3-211ENST00000515289 GRIFINA4D1Z8 144 aa4.36□□□□□ -1.71
NPHP3-211ENST00000515289 ARMS2P0C7Q2 107 aa4.36□□□□□ -1.71
NPHP3-211ENST00000515289 IGLC6P0CF74 106 aa4.36□□□□□ -1.71
NPHP3-211ENST00000515289 CD28P10747 220 aa4.36□□□□□ -1.71
NPHP3-211ENST00000515289 HBBP68871 147 aa4.36□□□□□ -1.71
NPHP3-211ENST00000515289 PYY3Q5JQD4 70 aa4.36□□□□□ -1.71
NPHP3-211ENST00000515289 PRR9Q5T870 116 aa4.36□□□□□ -1.71
NPHP3-211ENST00000515289 Q5W150 140 aa4.36□□□□□ -1.71
NPHP3-211ENST00000515289 OR10D4PQ8NGN7 298 aa4.36□□□□□ -1.71
NPHP3-211ENST00000515289 DCANP1Q8TF63 244 aa4.36□□□□□ -1.71
NPHP3-211ENST00000515289 C12orf57Q99622 126 aa4.36□□□□□ -1.71
NPHP3-211ENST00000515289 UFC1Q9Y3C8 167 aa4.36□□□□□ -1.71
NPHP3-211ENST00000515289 TMEM189A5PLL7 270 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 OVOL1O14753 267 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 FABP4P15090 132 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 S100A2P29034 98 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 DEFB1P60022 68 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 RPS20P60866 119 aaKnown RBP4.35□□□□□ -1.71
NPHP3-211ENST00000515289 Q6AWC8 147 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 SMIM15Q7Z3B0 74 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 ZFAND2AQ8N6M9 145 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 C4orf3Q8WVX3 66 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 BORCS7Q96B45 105 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 LENEPQ9Y5L5 61 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 CELSR1Q9NYQ6 3014 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 AKAP9Q99996 3911 aa4.35□□□□□ -1.71
NPHP3-211ENST00000515289 SONP18583 2426 aaKnown RBP4.34□□□□□ -1.71
NPHP3-211ENST00000515289 TMSB15BA0A087X1C1 80 aa4.34□□□□□ -1.71
NPHP3-211ENST00000515289 IGKV3D-20A0A0C4DH25 116 aa4.34□□□□□ -1.71
NPHP3-211ENST00000515289 A0A1B0GUT8 65 aa4.34□□□□□ -1.71
NPHP3-211ENST00000515289 C2orf70A6NJV1 201 aa4.34□□□□□ -1.71
NPHP3-211ENST00000515289 ZNF705DP0CH99 300 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-211ENST00000515289 ZNF705BP0CI00 300 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms