RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 NDUFA7O95182 113 aa10.09□□□□□ -0.79
TCOF1-214ENST00000515035 V9GYY9 64 aa10.09□□□□□ -0.79
TCOF1-214ENST00000515035 MRPS12O15235 138 aaKnown RBP10.08□□□□□ -0.8
TCOF1-214ENST00000515035 KIF26AQ9ULI4 1882 aaPredicted RBP10.08□□□□□ -0.8
TCOF1-214ENST00000515035 A0A0J9YX75 114 aa10.08□□□□□ -0.8
TCOF1-214ENST00000515035 P0DMU3 169 aa10.08□□□□□ -0.8
TCOF1-214ENST00000515035 FAM231AP0DMU4 169 aa10.08□□□□□ -0.8
TCOF1-214ENST00000515035 FAM231CP0DMU5 169 aa10.08□□□□□ -0.8
TCOF1-214ENST00000515035 UNQ9165/PRO28630Q6UXU0 137 aa10.08□□□□□ -0.8
TCOF1-214ENST00000515035 GPHB5Q86YW7 130 aa10.08□□□□□ -0.8
TCOF1-214ENST00000515035 C2orf16Q68DN1 1984 aa10.08□□□□□ -0.8
TCOF1-214ENST00000515035 PTPN13Q12923 2485 aa10.08□□□□□ -0.8
TCOF1-214ENST00000515035 TRBV10-1A0A0K0K1A3 114 aa10.08□□□□□ -0.8
TCOF1-214ENST00000515035 H0Y9J4 135 aa10.08□□□□□ -0.8
TCOF1-214ENST00000515035 ZNF22P17026 224 aaPredicted RBP10.08□□□□□ -0.8
TCOF1-214ENST00000515035 KLK12Q9UKR0 248 aa10.08□□□□□ -0.8
TCOF1-214ENST00000515035 TRBV30A0A0K0K1B3 111 aa10.07□□□□□ -0.8
TCOF1-214ENST00000515035 Q8NA96 180 aa10.07□□□□□ -0.8
TCOF1-214ENST00000515035 CDKN2A-AS1Q9UH64 79 aa10.07□□□□□ -0.8
TCOF1-214ENST00000515035 BRWD1-AS2P59051 145 aa10.07□□□□□ -0.8
TCOF1-214ENST00000515035 ALPK3Q96L96 1907 aa10.06□□□□□ -0.8
TCOF1-214ENST00000515035 UBE2AP49459 152 aa10.06□□□□□ -0.8
TCOF1-214ENST00000515035 SCXQ7RTU7 201 aa10.06□□□□□ -0.8
TCOF1-214ENST00000515035 C2orf91Q6ZV80 131 aa10.06□□□□□ -0.8
TCOF1-214ENST00000515035 Q8N7P7 452 aa10.06□□□□□ -0.8
TCOF1-214ENST00000515035 OBSL1O75147 1896 aa10.06□□□□□ -0.8
TCOF1-214ENST00000515035 TMEM223A0PJW6 202 aa10.05□□□□□ -0.8
TCOF1-214ENST00000515035 CCDC179H3BU77 68 aa10.05□□□□□ -0.8
TCOF1-214ENST00000515035 SLPIP03973 132 aa10.05□□□□□ -0.8
TCOF1-214ENST00000515035 Q6ZPA2 131 aa10.05□□□□□ -0.8
TCOF1-214ENST00000515035 ZMAT4Q9H898 229 aa10.05□□□□□ -0.8
TCOF1-214ENST00000515035 SERP2Q8N6R1 65 aa10.05□□□□□ -0.8
TCOF1-214ENST00000515035 LINC00308Q8TCZ7 52 aa10.05□□□□□ -0.8
TCOF1-214ENST00000515035 ZNF106Q9H2Y7 1883 aaKnown RBP10.05□□□□□ -0.8
TCOF1-214ENST00000515035 XGP55808 180 aa10.05□□□□□ -0.8
TCOF1-214ENST00000515035 IMUPQ9GZP8 106 aa10.04□□□□□ -0.8
TCOF1-214ENST00000515035 CCL18P55774 89 aa10.04□□□□□ -0.8
TCOF1-214ENST00000515035 CFAP126Q5VTH2 177 aa10.04□□□□□ -0.8
TCOF1-214ENST00000515035 PIEZO1Q92508 2521 aa10.04□□□□□ -0.8
TCOF1-214ENST00000515035 DOPEY1Q5JWR5 2465 aa10.04□□□□□ -0.8
TCOF1-214ENST00000515035 USP17L23D6RBM5 183 aa10.03□□□□□ -0.8
TCOF1-214ENST00000515035 CLUHP3Q96NS8 147 aa10.03□□□□□ -0.8
TCOF1-214ENST00000515035 IGLV4-3A0A075B6K6 122 aa10.03□□□□□ -0.8
TCOF1-214ENST00000515035 IGKV4-1P06312 121 aa10.03□□□□□ -0.8
TCOF1-214ENST00000515035 SEC61GP60059 68 aa10.03□□□□□ -0.8
TCOF1-214ENST00000515035 NRGNQ92686 78 aa10.03□□□□□ -0.8
TCOF1-214ENST00000515035 C9orf66Q5T8R8 295 aa10.03□□□□□ -0.8
TCOF1-214ENST00000515035 WFDC11Q8NEX6 87 aa10.03□□□□□ -0.8
TCOF1-214ENST00000515035 TMEM263Q8WUH6 116 aaKnown RBP10.03□□□□□ -0.8
TCOF1-214ENST00000515035 SIRPDQ9H106 197 aa10.03□□□□□ -0.8
TCOF1-214ENST00000515035 ZFAND2AQ8N6M9 145 aa10.02□□□□□ -0.8
TCOF1-214ENST00000515035 PIK3CD-AS1Q5SR53 167 aa10.02□□□□□ -0.81
TCOF1-214ENST00000515035 UFSP1Q6NVU6 142 aa10.02□□□□□ -0.81
TCOF1-214ENST00000515035 LINC00467Q9BRT7 94 aa10.02□□□□□ -0.81
TCOF1-214ENST00000515035 PRO0255Q9UI72 69 aa10.01□□□□□ -0.81
TCOF1-214ENST00000515035 INSL3P51460 131 aa10.01□□□□□ -0.81
TCOF1-214ENST00000515035 MSMPQ1L6U9 139 aa10.01□□□□□ -0.81
TCOF1-214ENST00000515035 OTOGLQ3ZCN5 2332 aa10.01□□□□□ -0.81
TCOF1-214ENST00000515035 COX7CP15954 63 aa10.01□□□□□ -0.81
TCOF1-214ENST00000515035 ZFP36P26651 326 aaKnown RBP10.01□□□□□ -0.81
TCOF1-214ENST00000515035 CCDC140Q96MF4 163 aa10.01□□□□□ -0.81
TCOF1-214ENST00000515035 U3KQK5 164 aa10□□□□□ -0.81
TCOF1-214ENST00000515035 DEFB4AO15263 64 aa10□□□□□ -0.81
TCOF1-214ENST00000515035 CRIP1P50238 77 aa10□□□□□ -0.81
TCOF1-214ENST00000515035 RNF185Q96GF1 192 aa9.99□□□□□ -0.81
TCOF1-214ENST00000515035 NDUFC1O43677 76 aa9.99□□□□□ -0.81
TCOF1-214ENST00000515035 DEFB135Q30KP9 77 aa9.99□□□□□ -0.81
TCOF1-214ENST00000515035 CRIP3Q6Q6R5 217 aa9.99□□□□□ -0.81
TCOF1-214ENST00000515035 MED12LQ86YW9 2145 aa9.99□□□□□ -0.81
TCOF1-214ENST00000515035 ATP5EP56381 51 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-214ENST00000515035 LRRC75A-AS1Q8N1F1 130 aa9.99□□□□□ -0.81
TCOF1-214ENST00000515035 SNURFQ9Y675 71 aa9.99□□□□□ -0.81
TCOF1-214ENST00000515035 TMEM89A2RUT3 159 aa9.98□□□□□ -0.81
TCOF1-214ENST00000515035 IBA57-AS1B1ANH7 110 aa9.98□□□□□ -0.81
TCOF1-214ENST00000515035 Q6ZTI0 123 aa9.98□□□□□ -0.81
TCOF1-214ENST00000515035 IGF1P05019 195 aa9.98□□□□□ -0.81
TCOF1-214ENST00000515035 HIVEP2P31629 2446 aa9.97□□□□□ -0.81
TCOF1-214ENST00000515035 ADAMTS9Q9P2N4 1935 aa9.97□□□□□ -0.81
TCOF1-214ENST00000515035 LST1O00453 97 aa9.97□□□□□ -0.81
TCOF1-214ENST00000515035 LINC00269Q8N2A0 174 aa9.97□□□□□ -0.81
TCOF1-214ENST00000515035 TIMM17BO60830 172 aa9.97□□□□□ -0.81
TCOF1-214ENST00000515035 HIGD2AQ9BW72 106 aa9.97□□□□□ -0.81
TCOF1-214ENST00000515035 MAP6D1Q9H9H5 199 aa9.96□□□□□ -0.81
TCOF1-214ENST00000515035 COL4A4P53420 1690 aaPredicted RBP9.96□□□□□ -0.81
TCOF1-214ENST00000515035 LINC00574Q9H8X3 128 aa9.96□□□□□ -0.81
TCOF1-214ENST00000515035 F8W735 103 aaPredicted RBP9.96□□□□□ -0.82
TCOF1-214ENST00000515035 C6orf99Q4VX62 202 aa9.96□□□□□ -0.82
TCOF1-214ENST00000515035 ODF3Q96PU9 254 aa9.96□□□□□ -0.82
TCOF1-214ENST00000515035 C1orf229Q6ZS94 237 aaPredicted RBP9.96□□□□□ -0.82
TCOF1-214ENST00000515035 FAM19A3Q7Z5A8 133 aa9.96□□□□□ -0.82
TCOF1-214ENST00000515035 M0QY20 66 aa9.95□□□□□ -0.82
TCOF1-214ENST00000515035 WISP2O76076 250 aa9.95□□□□□ -0.82
TCOF1-214ENST00000515035 MYCNOSP40205 109 aa9.95□□□□□ -0.82
TCOF1-214ENST00000515035 REG3AQ06141 175 aa9.95□□□□□ -0.82
TCOF1-214ENST00000515035 EIF4EBP1Q13541 118 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-214ENST00000515035 CCKP06307 115 aa9.95□□□□□ -0.82
TCOF1-214ENST00000515035 C1orf195Q5TG92 126 aa9.94□□□□□ -0.82
TCOF1-214ENST00000515035 M0QXV9 152 aa9.94□□□□□ -0.82
TCOF1-214ENST00000515035 LINC00694P0DN24 101 aa9.94□□□□□ -0.82
TCOF1-214ENST00000515035 LINC01548A6NM66 108 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms