RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 PRSS3P2Q8NHM4 247 aa7.03□□□□□ -1.28
NEDD9-214ENST00000513989 ALKBH7Q9BT30 221 aaPredicted RBP7.03□□□□□ -1.28
NEDD9-214ENST00000513989 TMEM70Q9BUB7 260 aa7.03□□□□□ -1.28
NEDD9-214ENST00000513989 NXT2Q9NPJ8 142 aaKnown RBP7.03□□□□□ -1.28
NEDD9-214ENST00000513989 VPS13DQ5THJ4 4388 aa7.02□□□□□ -1.29
NEDD9-214ENST00000513989 TRBV25-1A0A075B6N4 114 aa7.02□□□□□ -1.29
NEDD9-214ENST00000513989 IGHV3-38A0A0C4DH36 116 aa7.02□□□□□ -1.29
NEDD9-214ENST00000513989 GAS8-AS1O95177 125 aa7.02□□□□□ -1.29
NEDD9-214ENST00000513989 NPYP01303 97 aa7.02□□□□□ -1.29
NEDD9-214ENST00000513989 LINC00694P0DN24 101 aa7.02□□□□□ -1.29
NEDD9-214ENST00000513989 RAB5BP61020 215 aa7.02□□□□□ -1.29
NEDD9-214ENST00000513989 SMAGPQ0VAQ4 97 aa7.02□□□□□ -1.29
NEDD9-214ENST00000513989 LELP1Q5T871 98 aa7.02□□□□□ -1.29
NEDD9-214ENST00000513989 TRBV6-8A0A0A6YYG3 113 aa7.01□□□□□ -1.29
NEDD9-214ENST00000513989 IGHV1-24A0A0C4DH33 117 aa7.01□□□□□ -1.29
NEDD9-214ENST00000513989 TMEM262E9PQX1 116 aa7.01□□□□□ -1.29
NEDD9-214ENST00000513989 K7EMI3 77 aa7.01□□□□□ -1.29
NEDD9-214ENST00000513989 Q8N8P6 123 aa7.01□□□□□ -1.29
NEDD9-214ENST00000513989 TMEM18Q96B42 140 aa7.01□□□□□ -1.29
NEDD9-214ENST00000513989 SMIM2Q9BVW6 85 aa7.01□□□□□ -1.29
NEDD9-214ENST00000513989 KRTAP17-1Q9BYP8 105 aa7.01□□□□□ -1.29
NEDD9-214ENST00000513989 DNAH6Q9C0G6 4158 aa7.01□□□□□ -1.29
NEDD9-214ENST00000513989 TRAV9-2A0A087WT02 112 aa7□□□□□ -1.29
NEDD9-214ENST00000513989 UBE2L6O14933 153 aa7□□□□□ -1.29
NEDD9-214ENST00000513989 AMTP48728 403 aa7□□□□□ -1.29
NEDD9-214ENST00000513989 LGALS9CQ6DKI2 356 aa7□□□□□ -1.29
NEDD9-214ENST00000513989 FA2HQ7L5A8 372 aa7□□□□□ -1.29
NEDD9-214ENST00000513989 TMEM243Q9BU79 118 aa7□□□□□ -1.29
NEDD9-214ENST00000513989 MRPS16Q9Y3D3 137 aaKnown RBP7□□□□□ -1.29
NEDD9-214ENST00000513989 C1orf196B1AJZ1 125 aa6.99□□□□□ -1.29
NEDD9-214ENST00000513989 IQCJQ1A5X6 159 aa6.99□□□□□ -1.29
NEDD9-214ENST00000513989 ORMDL2Q53FV1 153 aa6.99□□□□□ -1.29
NEDD9-214ENST00000513989 BAGE3Q86Y29 109 aa6.99□□□□□ -1.29
NEDD9-214ENST00000513989 CHCHD5Q9BSY4 110 aa6.99□□□□□ -1.29
NEDD9-214ENST00000513989 Q9H8V8 135 aa6.99□□□□□ -1.29
NEDD9-214ENST00000513989 LINC00588Q9Y4M8 146 aa6.99□□□□□ -1.29
NEDD9-214ENST00000513989 A0A087WX48 190 aa6.98□□□□□ -1.29
NEDD9-214ENST00000513989 H7C423 109 aa6.98□□□□□ -1.29
NEDD9-214ENST00000513989 LY6G6CO95867 125 aa6.98□□□□□ -1.29
NEDD9-214ENST00000513989 LINC00614P0C842 121 aa6.98□□□□□ -1.29
NEDD9-214ENST00000513989 IFI27P40305 119 aaPredicted RBP6.98□□□□□ -1.29
NEDD9-214ENST00000513989 LAGE3Q14657 143 aa6.98□□□□□ -1.29
NEDD9-214ENST00000513989 UPK3BQ9BT76 320 aa6.98□□□□□ -1.29
NEDD9-214ENST00000513989 KIAA1109Q2LD37 5005 aa6.98□□□□□ -1.29
NEDD9-214ENST00000513989 K7EP13 123 aa6.97□□□□□ -1.29
NEDD9-214ENST00000513989 SIVA1O15304 175 aa6.97□□□□□ -1.29
NEDD9-214ENST00000513989 TSHBP01222 138 aa6.97□□□□□ -1.29
NEDD9-214ENST00000513989 Q0VG73 95 aa6.97□□□□□ -1.29
NEDD9-214ENST00000513989 AMMECR1LQ6DCA0 310 aa6.97□□□□□ -1.29
NEDD9-214ENST00000513989 NTM-AS1Q6ZSK4 140 aa6.97□□□□□ -1.29
NEDD9-214ENST00000513989 NIT1Q86X76 327 aa6.97□□□□□ -1.29
NEDD9-214ENST00000513989 C18orf32Q8TCD1 76 aa6.97□□□□□ -1.29
NEDD9-214ENST00000513989 LINC01549A6NIU2 74 aa6.96□□□□□ -1.3
NEDD9-214ENST00000513989 DGAT2L7PQ6IED9 249 aa6.96□□□□□ -1.3
NEDD9-214ENST00000513989 DEFB104AQ8WTQ1 72 aa6.96□□□□□ -1.3
NEDD9-214ENST00000513989 CHCHD1Q96BP2 118 aaKnown RBP6.96□□□□□ -1.3
NEDD9-214ENST00000513989 TMEM101Q96IK0 257 aa6.96□□□□□ -1.3
NEDD9-214ENST00000513989 CHCHD7Q9BUK0 85 aa6.96□□□□□ -1.3
NEDD9-214ENST00000513989 AP5S1Q9NUS5 200 aa6.96□□□□□ -1.3
NEDD9-214ENST00000513989 IGLV2-18A0A075B6J9 118 aa6.95□□□□□ -1.3
NEDD9-214ENST00000513989 ESDP10768 282 aa6.95□□□□□ -1.3
NEDD9-214ENST00000513989 GAGE6Q13070 117 aa6.95□□□□□ -1.3
NEDD9-214ENST00000513989 C10orf126Q8N4M7 172 aa6.95□□□□□ -1.3
NEDD9-214ENST00000513989 PKHD1P08F94 4074 aa6.95□□□□□ -1.3
NEDD9-214ENST00000513989 PCLOQ9Y6V0 5065 aa6.95□□□□□ -1.3
NEDD9-214ENST00000513989 NACAE9PAV3 2078 aa6.94□□□□□ -1.3
NEDD9-214ENST00000513989 FAT2Q9NYQ8 4349 aa6.94□□□□□ -1.3
NEDD9-214ENST00000513989 DNAH2Q9P225 4427 aa6.94□□□□□ -1.3
NEDD9-214ENST00000513989 A0A1B0GUV1 79 aa6.94□□□□□ -1.3
NEDD9-214ENST00000513989 LINC01546A6NGU7 62 aa6.94□□□□□ -1.3
NEDD9-214ENST00000513989 DNAH10OSP0CZ25 163 aa6.94□□□□□ -1.3
NEDD9-214ENST00000513989 ZNF25P17030 456 aaPredicted RBP6.94□□□□□ -1.3
NEDD9-214ENST00000513989 BTF3P20290 206 aaKnown RBP6.94□□□□□ -1.3
NEDD9-214ENST00000513989 TTC32Q5I0X7 151 aa6.94□□□□□ -1.3
NEDD9-214ENST00000513989 LINC01556Q5JQF7 62 aa6.94□□□□□ -1.3
NEDD9-214ENST00000513989 RNASEKQ6P5S7 137 aaKnown RBP6.94□□□□□ -1.3
NEDD9-214ENST00000513989 C20orf203Q8NBC4 194 aa6.94□□□□□ -1.3
NEDD9-214ENST00000513989 CYSLTR1Q9Y271 337 aa6.94□□□□□ -1.3
NEDD9-214ENST00000513989 DNAH17Q9UFH2 4485 aa6.94□□□□□ -1.3
NEDD9-214ENST00000513989 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-214ENST00000513989 IGKV2-29A2NJV5 120 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-214ENST00000513989 HIST1H2BKO60814 126 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 HSBP1O75506 76 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 HIST1H2BJP06899 126 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 FGF6P10767 208 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 HIST1H2BOP23527 126 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 HIST1H2BBP33778 126 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 HIST1H2BDP58876 126 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 HIST1H2BCP62807 126 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 HIST2H2BEQ16778 126 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.93□□□□□ -1.3
NEDD9-214ENST00000513989 WFDC10BQ8IUB3 73 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 OR5A1Q8NGJ0 315 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 HIST1H2BHQ93079 126 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 HIST1H2BNQ99877 126 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 HIST1H2BMQ99879 126 aa6.93□□□□□ -1.3
NEDD9-214ENST00000513989 RBX1P62877 108 aa6.92□□□□□ -1.3
NEDD9-214ENST00000513989 PAPPA-AS1Q5QFB9 102 aa6.92□□□□□ -1.3
NEDD9-214ENST00000513989 TIMM21Q9BVV7 248 aa6.92□□□□□ -1.3
NEDD9-214ENST00000513989 SPANXA1Q9NS26 97 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms