RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 FAM27BQ5VT28 67 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 Q6ZQT0 140 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 C14orf178Q8N769 122 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 SPTSSBQ8NFR3 76 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 R4GMQ9 66 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 RIF1Q5UIP0 2472 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 TRAV1-2A0A0B4J238 106 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 PIN1P1O15428 100 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 IGLV2-11P01706 119 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 PTHLHP12272 177 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 XCL1P47992 114 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 C15orf32Q32M92 178 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 CRIP3Q6Q6R5 217 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 LINC00269Q8N2A0 174 aa4.11□□□□□ -1.75
TRAPPC11-209ENST00000512476 CACNA1DQ01668 2161 aa4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 CNOT1A5YKK6 2376 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 HMSDA8MTL9 139 aa4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 MRPL33O75394 65 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 Q1RN00 199 aa4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 LYPD5Q6UWN5 251 aa4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 Q6ZTC4 211 aa4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 TYMSOSQ8TAI1 123 aa4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 MINOS1-NBL1R4GNA1 71 aa4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 ALPK2Q86TB3 2170 aa4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 C16orf90A8MZG2 172 aa4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 IBA57-AS1B1ANH7 110 aa4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 ESRGQ1W209 222 aa4.1□□□□□ -1.75
TRAPPC11-209ENST00000512476 CEP250Q9BV73 2442 aa4.09□□□□□ -1.75
TRAPPC11-209ENST00000512476 SYS1-DBNDD2H3BUS1 97 aa4.09□□□□□ -1.75
TRAPPC11-209ENST00000512476 MUC7Q8TAX7 377 aa4.09□□□□□ -1.75
TRAPPC11-209ENST00000512476 SCO2A0A1W2PP80 73 aa4.09□□□□□ -1.76
TRAPPC11-209ENST00000512476 H3BSH0 61 aa4.09□□□□□ -1.76
TRAPPC11-209ENST00000512476 ATOX1O00244 68 aa4.09□□□□□ -1.76
TRAPPC11-209ENST00000512476 P0C880 135 aa4.09□□□□□ -1.76
TRAPPC11-209ENST00000512476 DNAH10OSP0CZ25 163 aa4.09□□□□□ -1.76
TRAPPC11-209ENST00000512476 NXT2Q9NPJ8 142 aaKnown RBP4.09□□□□□ -1.76
TRAPPC11-209ENST00000512476 MGST1P10620 155 aaKnown RBP4.08□□□□□ -1.76
TRAPPC11-209ENST00000512476 SFTA2Q6UW10 78 aa4.08□□□□□ -1.76
TRAPPC11-209ENST00000512476 V9GYH0 126 aa4.08□□□□□ -1.76
TRAPPC11-209ENST00000512476 CCL8P80075 99 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 IGFBP7Q16270 282 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 ODF3Q96PU9 254 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 BPESC1Q9GZL8 116 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 ABRACLQ9P1F3 81 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 PTPRZ1P23471 2315 aaPredicted RBP4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 TRAV14DV4A0A0A6YYC5 116 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 CRYM-AS1A6NIL9 109 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 M0R135 149 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 IGLV3-1P01715 115 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 ZNF345Q14585 488 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 ZNF79Q15937 498 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 C9orf106Q8NAJ2 232 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 CMTM2Q8TAZ6 248 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 ZNF355PQ9NSJ1 428 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 CNTRLQ7Z7A1 2325 aa4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 HEATR1Q9H583 2144 aaKnown RBP4.07□□□□□ -1.76
TRAPPC11-209ENST00000512476 TRAV7A0A075B6U4 112 aa4.06□□□□□ -1.76
TRAPPC11-209ENST00000512476 C11orf86A6NJI1 115 aa4.06□□□□□ -1.76
TRAPPC11-209ENST00000512476 EFNA4P52798 201 aa4.06□□□□□ -1.76
TRAPPC11-209ENST00000512476 SERP2Q8N6R1 65 aa4.06□□□□□ -1.76
TRAPPC11-209ENST00000512476 AKAP13Q12802 2813 aa4.06□□□□□ -1.76
TRAPPC11-209ENST00000512476 MUCL1Q96DR8 90 aa4.06□□□□□ -1.76
TRAPPC11-209ENST00000512476 ZNRD1Q9P1U0 126 aa4.06□□□□□ -1.76
TRAPPC11-209ENST00000512476 A6NIN4 97 aa4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 HMGN3Q15651 99 aa4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 LYPD6Q86Y78 171 aa4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 FAM215AQ9Y5M1 114 aa4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 NCOA6Q14686 2063 aaPredicted RBP4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 DCHS1Q96JQ0 3298 aa4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 DNAJC13O75165 2243 aa4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 TRAV2A0A0B4J234 112 aa4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 LHBP01229 141 aa4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 PYDC2Q56P42 97 aa4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 TIMM9Q9Y5J7 89 aa4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 CELSR3Q9NYQ7 3312 aa4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 CACNA1CQ13936 2221 aa4.05□□□□□ -1.76
TRAPPC11-209ENST00000512476 hDV103S1A0JD37 113 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 H3BQ85 93 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 PMCHL1Q16048 86 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 RPRMLQ8N4K4 120 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 C18orf32Q8TCD1 76 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 MYOZ3Q8TDC0 251 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 ZFHX4Q86UP3 3567 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 ASPMQ8IZT6 3477 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 ELOBQ15370 118 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 Q1T7F1 81 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 FAM223AQ8IWN6 122 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 SMIM7Q9BQ49 75 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 SMDT1Q9H4I9 107 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 DOCK11Q5JSL3 2073 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 LOC400499M0QZD8 3231 aa4.04□□□□□ -1.76
TRAPPC11-209ENST00000512476 SFTA3P0C7M3 94 aa4.03□□□□□ -1.76
TRAPPC11-209ENST00000512476 RPL7L1Q6DKI1 246 aaKnown RBP4.03□□□□□ -1.76
TRAPPC11-209ENST00000512476 DYNLRB2Q8TF09 96 aa4.03□□□□□ -1.76
TRAPPC11-209ENST00000512476 C20orf166-AS1Q96NR2 134 aa4.03□□□□□ -1.76
TRAPPC11-209ENST00000512476 FREM1Q5H8C1 2179 aa4.03□□□□□ -1.76
TRAPPC11-209ENST00000512476 FRYQ5TBA9 3013 aa4.03□□□□□ -1.76
TRAPPC11-209ENST00000512476 PANO1I0J062 215 aa4.03□□□□□ -1.76
TRAPPC11-209ENST00000512476 TMEM136Q6ZRR5 245 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms