RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 hADV29S1A0JD25 119 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 CRYM-AS1A6NIL9 109 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 B4DSR2 109 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 C9JCJ5 164 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 BMPR1BO00238 502 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 LHBP01229 141 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 PRSS1P07477 247 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 MSMBP08118 114 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 CD7P09564 240 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 PI3P19957 117 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 HLA-DMBP28068 263 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 EDDM3BP56851 147 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 PIGYQ3MUY2 71 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 CYYR1Q96J86 154 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 CELA1Q9UNI1 258 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 C2CD3Q4AC94 2353 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 SERF2P84101 59 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 KRTAP1-1Q07627 177 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 CD177Q8N6Q3 437 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 OPRPNQ99935 248 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 ZNF286AQ9HBT8 521 aa3.66□□□□□ -1.82
TRAPPC11-208ENST00000511955 TIMM17BO60830 172 aa3.65□□□□□ -1.82
TRAPPC11-208ENST00000511955 IGKCP01834 107 aa3.65□□□□□ -1.82
TRAPPC11-208ENST00000511955 CRIP3Q6Q6R5 217 aa3.65□□□□□ -1.82
TRAPPC11-208ENST00000511955 CHAC1Q9BUX1 264 aa3.65□□□□□ -1.82
TRAPPC11-208ENST00000511955 Q9H3A6 140 aa3.65□□□□□ -1.82
TRAPPC11-208ENST00000511955 COL6A5A8TX70 2615 aa3.65□□□□□ -1.82
TRAPPC11-208ENST00000511955 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 SSSCA1O60232 199 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 IGKV1-16P04430 117 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 PRSS2P07478 247 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 ZNF816Q0VGE8 651 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 CIRBPQ14011 172 aaKnown RBP3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 TMEM155Q4W5P6 130 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 ADAMTSL4-AS1Q5T5F5 129 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 CFAP126Q5VTH2 177 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 CEMP1Q6PRD7 247 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 C7orf65Q6ZTY9 151 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 NFE4Q86UQ8 179 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 AMN1Q8IY45 258 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 Q8N2B8 174 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 UBALD1Q8TB05 177 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 LINC00479Q96M42 142 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 GAFA1Q96PS6 74 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 TANC2Q9HCD6 1990 aa3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 FBN1P35555 2871 aaKnown RBP3.65□□□□□ -1.83
TRAPPC11-208ENST00000511955 CTXND1A0A1B0GTU2 59 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 CHTF8P0CG12 524 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 CXCL6P80162 114 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 BRD3OSQ6XYD6 125 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 Q6ZQT7 251 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 Q6ZSN1 163 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 NRACQ8N912 160 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 TENM1Q9UKZ4 2725 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 IGLV5-37A0A075B6J1 123 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 TRAV40A0A0B4J280 105 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 LEPROTL1O95214 131 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 CCL3L1P16619 93 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 RNASE4P34096 147 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 FUSP35637 526 aaKnown RBP eCLIP3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 FGF12P61328 243 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 MRPS36P82909 103 aaKnown RBP3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 SBSPONQ8IVN8 264 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 PRSS3P2Q8NHM4 247 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 TXNDC17Q9BRA2 123 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 HIGD1BQ9P298 99 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 LY96Q9Y6Y9 160 aa3.64□□□□□ -1.83
TRAPPC11-208ENST00000511955 STAB1Q9NY15 2570 aa3.63□□□□□ -1.83
TRAPPC11-208ENST00000511955 KRTAP23-1A1A580 65 aa3.63□□□□□ -1.83
TRAPPC11-208ENST00000511955 C11orf94C9JXX5 98 aa3.63□□□□□ -1.83
TRAPPC11-208ENST00000511955 COX7A1P24310 79 aa3.63□□□□□ -1.83
TRAPPC11-208ENST00000511955 SOSTDC1Q6X4U4 206 aa3.63□□□□□ -1.83
TRAPPC11-208ENST00000511955 Q6ZRP5 223 aa3.63□□□□□ -1.83
TRAPPC11-208ENST00000511955 LYPD6Q86Y78 171 aa3.63□□□□□ -1.83
TRAPPC11-208ENST00000511955 Q8IYB0 196 aa3.63□□□□□ -1.83
TRAPPC11-208ENST00000511955 CHCHD1Q96BP2 118 aaKnown RBP3.63□□□□□ -1.83
TRAPPC11-208ENST00000511955 OSTCQ9NRP0 149 aa3.63□□□□□ -1.83
TRAPPC11-208ENST00000511955 TIMM9Q9Y5J7 89 aa3.63□□□□□ -1.83
TRAPPC11-208ENST00000511955 DOCK11Q5JSL3 2073 aa3.63□□□□□ -1.83
TRAPPC11-208ENST00000511955 RPL37AP8A6NKH3 93 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 KRTAP16-1A8MUX0 517 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 PEX7O00628 323 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 NPPCP23582 126 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 GNB1P62873 340 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 C6orf201Q7Z4U5 140 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 LYZL2Q7Z4W2 148 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 VMO1Q7Z5L0 202 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 LEAP2Q969E1 77 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 DIRC1Q969H9 104 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 KRTAP4-5Q9BYR2 181 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 KAAG1Q9UBP8 84 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 ANK3Q12955 4377 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 IGHV7-81A0A0B4J1V7 117 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 TRBV7-7A0A0K0K1E9 115 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 FXYD2P54710 66 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 BLCAPP62952 87 aa3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 FAM53AQ6NSI3 398 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 C1orf147Q96MC9 270 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC11-208ENST00000511955 IGHV1-24A0A0C4DH33 117 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms