RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 HMGN1P05114 100 aa1.61□□□□□ -2.15
HMGB1P47-201ENST00000511281 SLC25A5P05141 298 aaKnown RBP1.61□□□□□ -2.15
HMGB1P47-201ENST00000511281 NCS1P62166 190 aa1.61□□□□□ -2.15
HMGB1P47-201ENST00000511281 DEFB110Q30KQ9 67 aa1.61□□□□□ -2.15
HMGB1P47-201ENST00000511281 DEFB124Q8NES8 71 aa1.61□□□□□ -2.15
HMGB1P47-201ENST00000511281 S100ZQ8WXG8 99 aa1.61□□□□□ -2.15
HMGB1P47-201ENST00000511281 SDF2Q99470 211 aa1.61□□□□□ -2.15
HMGB1P47-201ENST00000511281 LSM2Q9Y333 95 aaKnown RBP1.61□□□□□ -2.15
HMGB1P47-201ENST00000511281 CFAP54Q96N23 3096 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 SPAARA0A1B0GVQ0 90 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 A0A1B0GWA3 101 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 OR2H2O95918 312 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 PPYP01298 95 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 IFNGP01579 166 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 COPZ1P61923 177 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 PSPHP78330 225 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 DEFB133Q30KQ1 61 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 RPL13AP3Q6NVV1 102 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 OR4S1Q8NGB4 309 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 CMC2Q9NRP2 79 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 FANCMQ8IYD8 2048 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 TTC28Q96AY4 2481 aa1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 SNRNP200O75643 2136 aaKnown RBP1.6□□□□□ -2.15
HMGB1P47-201ENST00000511281 ASCC3Q8N3C0 2202 aaKnown RBP1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 CITO14578 2027 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 ANK1P16157 1881 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 PDCD11Q14690 1871 aaKnown RBP1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 C3orf85A0A1B0GTC6 90 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 PNMA8CA0A1B0GUJ8 204 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 ZNF670-ZNF695F2Z2N8 137 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 CDC42EP2O14613 210 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 SULT1C4O75897 302 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 IGF2P01344 180 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 TCRAP04437 139 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 CD14P08571 375 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 TSPAN19P0C672 248 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 ETV6P41212 452 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 FXYD6P3P58550 94 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 RPS25P62851 125 aaKnown RBP1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 BTG2P78543 158 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 ACBD7Q8N6N7 88 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 TSLPQ969D9 159 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 TMEM203Q969S6 136 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 AMELYQ99218 206 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 FAIMQ9NVQ4 179 aa1.59□□□□□ -2.15
HMGB1P47-201ENST00000511281 VPS13AQ96RL7 3174 aa1.59□□□□□ -2.16
HMGB1P47-201ENST00000511281 BPTFQ12830 3046 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 TRIOO75962 3097 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 EML5Q05BV3 1969 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 A6NN06 94 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 IFITM5A6NNB3 132 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 ZNF727A8MUV8 499 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 MT-ND4LP03901 98 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 GYPBP06028 91 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 PPP3R1P63098 170 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 HSD17B12Q53GQ0 312 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 LINC01590Q5TEZ4 76 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 TMEM244Q5VVB8 128 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 TMEM91Q6ZNR0 172 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 SNX29P2Q8IUI4 249 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 RERGLQ9H628 205 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 IER3IP1Q9Y5U9 82 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 U3KQA8 63 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 V9GYH0 126 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 KNL1Q8NG31 2342 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 KIAA1549LQ6ZVL6 1849 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 CACNA1HO95180 2353 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 WDFY3Q8IZQ1 3526 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 DMXL1Q9Y485 3027 aa1.58□□□□□ -2.16
HMGB1P47-201ENST00000511281 ZDBF2Q9HCK1 2354 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 TRAV1-2A0A0B4J238 106 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 J3QLW9 94 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 PIN1P1O15428 100 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 IGLV3-1P01715 115 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 IGHV3-30P01768 117 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 TRAPPC2P0DI81 140 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 TRAPPC2BP0DI82 140 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 IGHV3-30-5P0DP03 117 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 CAV3P56539 151 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 DCDP81605 110 aaKnown RBP1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 INSL4Q14641 139 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 CCDC58Q4VC31 144 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 SPATA45Q537H7 98 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 GNG8Q9UK08 70 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 ASPMQ8IZT6 3477 aa1.57□□□□□ -2.16
HMGB1P47-201ENST00000511281 PTPRDP23468 1912 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 HELZP42694 1942 aaKnown RBP1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 NCOR1O75376 2440 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 SPEGQ15772 3267 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 FAM25AB3EWG3 89 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 FAM25CB3EWG5 89 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 FAM25GB3EWG6 89 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 IL7P13232 177 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 PDE6GP18545 87 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 SBSPONQ8IVN8 264 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 AP1S3Q96PC3 154 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 TTTY10Q9BZA0 68 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 WFDC10AQ9H1F0 79 aa1.56□□□□□ -2.16
HMGB1P47-201ENST00000511281 GSKIPQ9P0R6 139 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms