RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 LYPD1Q8N2G4 141 aa9.35□□□□□ -0.91
LIN54-210ENST00000510877 IGHV4-28A0A0C4DH34 117 aa9.35□□□□□ -0.91
LIN54-210ENST00000510877 H3BRN7 92 aa9.35□□□□□ -0.91
LIN54-210ENST00000510877 HLA-DRB4P13762 266 aa9.35□□□□□ -0.91
LIN54-210ENST00000510877 RNF152Q8N8N0 203 aa9.35□□□□□ -0.91
LIN54-210ENST00000510877 CYYR1Q96J86 154 aa9.35□□□□□ -0.91
LIN54-210ENST00000510877 HLA-DRB4X5D2U9 266 aa9.35□□□□□ -0.91
LIN54-210ENST00000510877 K7EQG2 157 aa9.35□□□□□ -0.91
LIN54-210ENST00000510877 CRIP2P52943 208 aaPredicted RBP9.35□□□□□ -0.91
LIN54-210ENST00000510877 FHL3Q13643 280 aa9.35□□□□□ -0.91
LIN54-210ENST00000510877 VWC2Q2TAL6 325 aa9.35□□□□□ -0.91
LIN54-210ENST00000510877 ASPHD1Q5U4P2 390 aa9.35□□□□□ -0.91
LIN54-210ENST00000510877 NTN5Q8WTR8 489 aaPredicted RBP9.35□□□□□ -0.91
LIN54-210ENST00000510877 WFDC2Q14508 124 aa9.34□□□□□ -0.91
LIN54-210ENST00000510877 BEAN1Q3B7T3 259 aa9.34□□□□□ -0.91
LIN54-210ENST00000510877 C8orf49Q96NF6 230 aa9.34□□□□□ -0.91
LIN54-210ENST00000510877 EGR2P11161 476 aaPredicted RBP9.34□□□□□ -0.91
LIN54-210ENST00000510877 NSD1Q96L73 2696 aaPredicted RBP9.34□□□□□ -0.91
LIN54-210ENST00000510877 LSM4Q9Y4Z0 139 aaKnown RBP9.34□□□□□ -0.91
LIN54-210ENST00000510877 CRIP3Q6Q6R5 217 aa9.34□□□□□ -0.91
LIN54-210ENST00000510877 CLUHP3Q96NS8 147 aa9.33□□□□□ -0.92
LIN54-210ENST00000510877 NUPR1O60356 82 aa9.33□□□□□ -0.92
LIN54-210ENST00000510877 FGF6P10767 208 aa9.33□□□□□ -0.92
LIN54-210ENST00000510877 LINC01545Q5VT33 79 aa9.33□□□□□ -0.92
LIN54-210ENST00000510877 NCR2O95944 276 aa9.33□□□□□ -0.92
LIN54-210ENST00000510877 FAM104BQ5XKR9 115 aa9.33□□□□□ -0.92
LIN54-210ENST00000510877 IGHV3-16A0A0C4DH30 117 aa9.33□□□□□ -0.92
LIN54-210ENST00000510877 K7ERJ3 54 aa9.32□□□□□ -0.92
LIN54-210ENST00000510877 SOCS3O14543 225 aa9.32□□□□□ -0.92
LIN54-210ENST00000510877 THAP8Q8NA92 274 aa9.32□□□□□ -0.92
LIN54-210ENST00000510877 U3KQE9 123 aa9.32□□□□□ -0.92
LIN54-210ENST00000510877 RHODO00212 210 aa9.32□□□□□ -0.92
LIN54-210ENST00000510877 TANC2Q9HCD6 1990 aa9.32□□□□□ -0.92
LIN54-210ENST00000510877 LYRM9A8MSI8 78 aa9.32□□□□□ -0.92
LIN54-210ENST00000510877 DSCAML1Q8TD84 2053 aa9.31□□□□□ -0.92
LIN54-210ENST00000510877 Q6ZPA2 131 aa9.31□□□□□ -0.92
LIN54-210ENST00000510877 TM2D2Q9BX73 214 aa9.31□□□□□ -0.92
LIN54-210ENST00000510877 RBMY1FQ15415 496 aaKnown RBP9.3□□□□□ -0.92
LIN54-210ENST00000510877 Q8N8P6 123 aa9.3□□□□□ -0.92
LIN54-210ENST00000510877 KRTAP10-3P60369 221 aa9.3□□□□□ -0.92
LIN54-210ENST00000510877 RBM3P98179 157 aaKnown RBP9.3□□□□□ -0.92
LIN54-210ENST00000510877 UTP20O75691 2785 aaKnown RBP9.3□□□□□ -0.92
LIN54-210ENST00000510877 A0A0J9YX75 114 aa9.3□□□□□ -0.92
LIN54-210ENST00000510877 F8VRH5 84 aa9.3□□□□□ -0.92
LIN54-210ENST00000510877 Q6ZUT4 128 aa9.3□□□□□ -0.92
LIN54-210ENST00000510877 TRBV19A0A075B6N1 114 aa9.3□□□□□ -0.92
LIN54-210ENST00000510877 ARMS2P0C7Q2 107 aa9.3□□□□□ -0.92
LIN54-210ENST00000510877 Q86TA4 180 aa9.3□□□□□ -0.92
LIN54-210ENST00000510877 PRSS46E5RG02 174 aa9.29□□□□□ -0.92
LIN54-210ENST00000510877 INS-IGF2F8WCM5 200 aa9.29□□□□□ -0.92
LIN54-210ENST00000510877 VCYO14598 125 aa9.29□□□□□ -0.92
LIN54-210ENST00000510877 NDUFV3P56181 108 aaKnown RBP9.29□□□□□ -0.92
LIN54-210ENST00000510877 RHOHQ15669 191 aa9.29□□□□□ -0.92
LIN54-210ENST00000510877 DCHS1Q96JQ0 3298 aa9.29□□□□□ -0.92
LIN54-210ENST00000510877 MALP21145 153 aa9.29□□□□□ -0.92
LIN54-210ENST00000510877 IGKV2D-24A0A075B6R9 120 aa9.28□□□□□ -0.92
LIN54-210ENST00000510877 GYPEP15421 78 aa9.28□□□□□ -0.92
LIN54-210ENST00000510877 NPC2P61916 151 aa9.28□□□□□ -0.92
LIN54-210ENST00000510877 UBL5Q9BZL1 73 aa9.28□□□□□ -0.92
LIN54-210ENST00000510877 TRBV25-1A0A075B6N4 114 aa9.28□□□□□ -0.92
LIN54-210ENST00000510877 ODF3L2Q3SX64 289 aa9.28□□□□□ -0.92
LIN54-210ENST00000510877 CARD19Q96LW7 228 aa9.28□□□□□ -0.92
LIN54-210ENST00000510877 TP53TG1Q9Y2A0 90 aa9.28□□□□□ -0.92
LIN54-210ENST00000510877 DEFB1P60022 68 aa9.28□□□□□ -0.92
LIN54-210ENST00000510877 TMEM263Q8WUH6 116 aaKnown RBP9.28□□□□□ -0.92
LIN54-210ENST00000510877 CR1P17927 2039 aa9.27□□□□□ -0.92
LIN54-210ENST00000510877 IGKV1OR2-108A0A075B7D4 117 aa9.27□□□□□ -0.92
LIN54-210ENST00000510877 NIPBLQ6KC79 2804 aaeCLIP9.27□□□□□ -0.93
LIN54-210ENST00000510877 FAM236AA0A1B0GUQ0 79 aa9.27□□□□□ -0.93
LIN54-210ENST00000510877 FAM236BA0A1B0GV22 79 aa9.27□□□□□ -0.93
LIN54-210ENST00000510877 V9GYY9 64 aa9.27□□□□□ -0.93
LIN54-210ENST00000510877 IGLV2-14P01704 120 aa9.27□□□□□ -0.93
LIN54-210ENST00000510877 CFC1BP0CG36 223 aa9.27□□□□□ -0.93
LIN54-210ENST00000510877 CFC1P0CG37 223 aa9.27□□□□□ -0.93
LIN54-210ENST00000510877 SH2D1AO60880 128 aa9.26□□□□□ -0.93
LIN54-210ENST00000510877 CEMP1Q6PRD7 247 aaPredicted RBP9.26□□□□□ -0.93
LIN54-210ENST00000510877 TMEM141Q96I45 108 aa9.26□□□□□ -0.93
LIN54-210ENST00000510877 PLA2G2EQ9NZK7 142 aa9.26□□□□□ -0.93
LIN54-210ENST00000510877 SPANXB1Q9NS25 103 aaPredicted RBP9.26□□□□□ -0.93
LIN54-210ENST00000510877 MRPL35Q9NZE8 188 aaKnown RBP9.26□□□□□ -0.93
LIN54-210ENST00000510877 PRO0255Q9UI72 69 aa9.26□□□□□ -0.93
LIN54-210ENST00000510877 UQCRQO14949 82 aa9.26□□□□□ -0.93
LIN54-210ENST00000510877 PCP2Q8IVA1 136 aa9.26□□□□□ -0.93
LIN54-210ENST00000510877 PTH2Q96A98 100 aa9.26□□□□□ -0.93
LIN54-210ENST00000510877 HHLA3Q9XRX5 114 aa9.25□□□□□ -0.93
LIN54-210ENST00000510877 TIMM21Q9BVV7 248 aa9.25□□□□□ -0.93
LIN54-210ENST00000510877 TRAV13-1A0A0B4J241 112 aa9.25□□□□□ -0.93
LIN54-210ENST00000510877 LEPROTO15243 131 aa9.25□□□□□ -0.93
LIN54-210ENST00000510877 RASL10AQ92737 203 aa9.25□□□□□ -0.93
LIN54-210ENST00000510877 MRPL36Q9P0J6 103 aaKnown RBP9.25□□□□□ -0.93
LIN54-210ENST00000510877 MRPL53Q96EL3 112 aaKnown RBP9.24□□□□□ -0.93
LIN54-210ENST00000510877 LINC00479Q96M42 142 aa9.24□□□□□ -0.93
LIN54-210ENST00000510877 TMEM75Q8N9X5 138 aa9.24□□□□□ -0.93
LIN54-210ENST00000510877 WIPF1O43516 503 aa9.24□□□□□ -0.93
LIN54-210ENST00000510877 KRTAP10-11P60412 298 aa9.24□□□□□ -0.93
LIN54-210ENST00000510877 YPEL4Q96NS1 127 aa9.24□□□□□ -0.93
LIN54-210ENST00000510877 TMEM243Q9BU79 118 aa9.24□□□□□ -0.93
LIN54-210ENST00000510877 GATD1Q8NB37 220 aa9.24□□□□□ -0.93
LIN54-210ENST00000510877 TMEM14CQ9P0S9 112 aa9.24□□□□□ -0.93
LIN54-210ENST00000510877 FXYD2P54710 66 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms