RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 SMIM15Q7Z3B0 74 aa8.15□□□□□ -1.1
KDM3B-206ENST00000509468 C20orf203Q8NBC4 194 aa8.15□□□□□ -1.1
KDM3B-206ENST00000509468 CNFNQ9BYD5 112 aa8.15□□□□□ -1.1
KDM3B-206ENST00000509468 AP5S1Q9NUS5 200 aa8.15□□□□□ -1.1
KDM3B-206ENST00000509468 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.14□□□□□ -1.11
KDM3B-206ENST00000509468 hDV102S1A0JD36 115 aa8.14□□□□□ -1.11
KDM3B-206ENST00000509468 TEX261Q6UWH6 196 aa8.14□□□□□ -1.11
KDM3B-206ENST00000509468 SDIM1Q6ZPB5 146 aa8.14□□□□□ -1.11
KDM3B-206ENST00000509468 OCC1Q8TAD7 63 aa8.14□□□□□ -1.11
KDM3B-206ENST00000509468 RPP21Q9H633 154 aaKnown RBP8.14□□□□□ -1.11
KDM3B-206ENST00000509468 IGLV4-60A0A075B6I1 120 aa8.13□□□□□ -1.11
KDM3B-206ENST00000509468 AMTP48728 403 aa8.13□□□□□ -1.11
KDM3B-206ENST00000509468 RPL37AP61513 92 aaKnown RBP8.13□□□□□ -1.11
KDM3B-206ENST00000509468 CNBPP62633 177 aaKnown RBP8.13□□□□□ -1.11
KDM3B-206ENST00000509468 SERTAD4-AS1Q5TG53 156 aa8.13□□□□□ -1.11
KDM3B-206ENST00000509468 DPH3Q96FX2 82 aa8.13□□□□□ -1.11
KDM3B-206ENST00000509468 CFAP161Q6P656 301 aa8.12□□□□□ -1.11
KDM3B-206ENST00000509468 GATD1Q8NB37 220 aa8.12□□□□□ -1.11
KDM3B-206ENST00000509468 RNASE7Q9H1E1 156 aaKnown RBP8.12□□□□□ -1.11
KDM3B-206ENST00000509468 IGHV3-64A0A075B6Q5 118 aa8.11□□□□□ -1.11
KDM3B-206ENST00000509468 H7C423 109 aa8.11□□□□□ -1.11
KDM3B-206ENST00000509468 NCR2O95944 276 aa8.11□□□□□ -1.11
KDM3B-206ENST00000509468 BLOC1S1P78537 153 aa8.11□□□□□ -1.11
KDM3B-206ENST00000509468 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.11□□□□□ -1.11
KDM3B-206ENST00000509468 A8MWL6 223 aa8.1□□□□□ -1.11
KDM3B-206ENST00000509468 TMEM250H0YL14 139 aa8.1□□□□□ -1.11
KDM3B-206ENST00000509468 K7EN84 100 aa8.1□□□□□ -1.11
KDM3B-206ENST00000509468 AMMECR1LQ6DCA0 310 aa8.1□□□□□ -1.11
KDM3B-206ENST00000509468 RNF185Q96GF1 192 aa8.1□□□□□ -1.11
KDM3B-206ENST00000509468 GFRA4Q9GZZ7 299 aa8.1□□□□□ -1.11
KDM3B-206ENST00000509468 GATCO43716 136 aaKnown RBP8.09□□□□□ -1.11
KDM3B-206ENST00000509468 GTSF1Q8WW33 167 aa8.09□□□□□ -1.11
KDM3B-206ENST00000509468 TRAV26-2A0A0B4J265 109 aa8.08□□□□□ -1.12
KDM3B-206ENST00000509468 GAGE12HA6NDE8 117 aa8.08□□□□□ -1.12
KDM3B-206ENST00000509468 I3L3M4 83 aa8.08□□□□□ -1.12
KDM3B-206ENST00000509468 FOXA3P55318 350 aaPredicted RBP8.08□□□□□ -1.12
KDM3B-206ENST00000509468 CIRBPQ14011 172 aaKnown RBP8.08□□□□□ -1.12
KDM3B-206ENST00000509468 FAM231DQ6ZW35 169 aa8.08□□□□□ -1.12
KDM3B-206ENST00000509468 BORCS7Q96B45 105 aa8.08□□□□□ -1.12
KDM3B-206ENST00000509468 FAM210AQ96ND0 272 aa8.08□□□□□ -1.12
KDM3B-206ENST00000509468 APCSP02743 223 aa8.07□□□□□ -1.12
KDM3B-206ENST00000509468 SLPIP03973 132 aa8.07□□□□□ -1.12
KDM3B-206ENST00000509468 PMCHP20382 165 aa8.07□□□□□ -1.12
KDM3B-206ENST00000509468 RNASEKQ6P5S7 137 aaKnown RBP8.07□□□□□ -1.12
KDM3B-206ENST00000509468 RPL39LQ96EH5 51 aaKnown RBP8.07□□□□□ -1.12
KDM3B-206ENST00000509468 IGKV3OR2-268A0A0C4DH90 116 aa8.06□□□□□ -1.12
KDM3B-206ENST00000509468 SDHAF1A6NFY7 115 aa8.06□□□□□ -1.12
KDM3B-206ENST00000509468 PANO1I0J062 215 aa8.06□□□□□ -1.12
KDM3B-206ENST00000509468 ZNF25P17030 456 aaPredicted RBP8.06□□□□□ -1.12
KDM3B-206ENST00000509468 RPS10P46783 165 aaKnown RBP8.06□□□□□ -1.12
KDM3B-206ENST00000509468 CT83Q5H943 113 aa8.06□□□□□ -1.12
KDM3B-206ENST00000509468 Q6ZNX1 250 aa8.06□□□□□ -1.12
KDM3B-206ENST00000509468 AKAP14Q86UN6 197 aa8.06□□□□□ -1.12
KDM3B-206ENST00000509468 LYPD6BQ8NI32 183 aa8.06□□□□□ -1.12
KDM3B-206ENST00000509468 BTF3L4Q96K17 158 aa8.06□□□□□ -1.12
KDM3B-206ENST00000509468 TRBV6-5A0A0K0K1A5 114 aa8.05□□□□□ -1.12
KDM3B-206ENST00000509468 NDUFS6O75380 124 aaKnown RBP8.05□□□□□ -1.12
KDM3B-206ENST00000509468 FGF6P10767 208 aa8.05□□□□□ -1.12
KDM3B-206ENST00000509468 ALKAL2Q6UX46 152 aa8.05□□□□□ -1.12
KDM3B-206ENST00000509468 CHCHD10Q8WYQ3 142 aaPredicted RBP8.05□□□□□ -1.12
KDM3B-206ENST00000509468 TMEM101Q96IK0 257 aa8.05□□□□□ -1.12
KDM3B-206ENST00000509468 ST20Q9HBF5 79 aa8.05□□□□□ -1.12
KDM3B-206ENST00000509468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.04□□□□□ -1.12
KDM3B-206ENST00000509468 A0A087WYN8 130 aa8.04□□□□□ -1.12
KDM3B-206ENST00000509468 IGKV2-29A2NJV5 120 aaPredicted RBP8.04□□□□□ -1.12
KDM3B-206ENST00000509468 CEBPGP53567 150 aa8.04□□□□□ -1.12
KDM3B-206ENST00000509468 Q6ZRU5 148 aa8.04□□□□□ -1.12
KDM3B-206ENST00000509468 C15orf56Q8N910 161 aa8.04□□□□□ -1.12
KDM3B-206ENST00000509468 OR5A1Q8NGJ0 315 aa8.04□□□□□ -1.12
KDM3B-206ENST00000509468 EIF5A2Q9GZV4 153 aaKnown RBP8.04□□□□□ -1.12
KDM3B-206ENST00000509468 A0A1B0GUT8 65 aa8.03□□□□□ -1.12
KDM3B-206ENST00000509468 FAM231BA6NCW3 169 aa8.03□□□□□ -1.12
KDM3B-206ENST00000509468 HNRNPA3P51991 378 aaKnown RBP8.03□□□□□ -1.12
KDM3B-206ENST00000509468 COX6A2Q02221 97 aa8.03□□□□□ -1.12
KDM3B-206ENST00000509468 SPACA4Q8TDM5 124 aa8.03□□□□□ -1.12
KDM3B-206ENST00000509468 TMEM191AQ9H0A3 160 aa8.03□□□□□ -1.12
KDM3B-206ENST00000509468 PLAC8Q9NZF1 115 aa8.03□□□□□ -1.12
KDM3B-206ENST00000509468 GVQW2A0A096LPI5 108 aaPredicted RBP8.02□□□□□ -1.13
KDM3B-206ENST00000509468 CHTF8P0CG12 524 aa8.02□□□□□ -1.13
KDM3B-206ENST00000509468 C7orf33Q8WU49 177 aa8.02□□□□□ -1.13
KDM3B-206ENST00000509468 TSKUQ8WUA8 353 aa8.02□□□□□ -1.13
KDM3B-206ENST00000509468 SMIM7Q9BQ49 75 aa8.02□□□□□ -1.13
KDM3B-206ENST00000509468 PKIGQ9Y2B9 76 aa8.02□□□□□ -1.13
KDM3B-206ENST00000509468 PKHD1L1Q86WI1 4243 aa8.02□□□□□ -1.13
KDM3B-206ENST00000509468 ZNF727A8MUV8 499 aa8.01□□□□□ -1.13
KDM3B-206ENST00000509468 HIGD1CA8MV81 97 aa8.01□□□□□ -1.13
KDM3B-206ENST00000509468 ESDP10768 282 aa8.01□□□□□ -1.13
KDM3B-206ENST00000509468 FOXI1Q12951 378 aa8.01□□□□□ -1.13
KDM3B-206ENST00000509468 SS18Q15532 418 aa8.01□□□□□ -1.13
KDM3B-206ENST00000509468 HIGD2BQ4VC39 106 aa8.01□□□□□ -1.13
KDM3B-206ENST00000509468 LINC01551Q86U37 167 aa8.01□□□□□ -1.13
KDM3B-206ENST00000509468 MRAP2Q96G30 205 aa8.01□□□□□ -1.13
KDM3B-206ENST00000509468 OSTCQ9NRP0 149 aa8.01□□□□□ -1.13
KDM3B-206ENST00000509468 LRP1Q07954 4544 aaKnown RBP8□□□□□ -1.13
KDM3B-206ENST00000509468 LINC00959A0A1B0GUT2 108 aa8□□□□□ -1.13
KDM3B-206ENST00000509468 VCYO14598 125 aa8□□□□□ -1.13
KDM3B-206ENST00000509468 PPP1R17O96001 155 aa8□□□□□ -1.13
KDM3B-206ENST00000509468 TSHBP01222 138 aa8□□□□□ -1.13
KDM3B-206ENST00000509468 RAB4AP20338 218 aa8□□□□□ -1.13
KDM3B-206ENST00000509468 XCL1P47992 114 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms