RNA–Protein interactions for RNA: ENST00000506929.1

CDC42SE2-210, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-210ENST00000506929 GUCA1AP43080 201 aaPredicted RBP0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 CAV3P56539 151 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 SPINK7P58062 85 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 KRTDAPP60985 99 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 GNG11P61952 73 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 UBE2BP63146 152 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 SEC11AP67812 179 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 DCDP81605 110 aaKnown RBP0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 QRFPP83859 136 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 MIR22HGQ0VDD5 57 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 Q0VG73 95 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 ZNF56Q15929 161 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 PMCHL1Q16048 86 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 MPV17LQ2QL34 196 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 Q56UQ5 140 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 C9orf116Q5BN46 136 aaPredicted RBP0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 LINC01545Q5VT33 79 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 Q5VV11 94 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 XAF1Q6GPH4 301 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 HEPN1Q6WQI6 88 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 C6orf201Q7Z4U5 140 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 TEN1Q86WV5 123 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 LINC00269Q8N2A0 174 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 SVBPQ8N300 66 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 ACBD7Q8N6N7 88 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 OR10AG1Q8NH19 301 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 VSTM2AQ8TAG5 236 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 MYOZ3Q8TDC0 251 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 S100ZQ8WXG8 99 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 PSMF1Q92530 271 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 DIRC1Q969H9 104 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 BORCS7Q96B45 105 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 TOMM6Q96B49 74 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 IFI27L1Q96BM0 104 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 MUCL1Q96DR8 90 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 LINC00526Q96FQ7 95 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 ZNF714Q96N38 554 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 MGST2Q99735 147 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 PRR15LQ9BU68 103 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 COMMD5Q9GZQ3 224 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 CST11Q9H112 138 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 SLC35B3Q9H1N7 401 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 NXT2Q9NPJ8 142 aaKnown RBP0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 MANBALQ9NQG1 85 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 OSTCQ9NRP0 149 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 SMCO4Q9NRQ5 59 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 CKLFQ9UBR5 152 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 LAMTOR3Q9UHA4 124 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 NOP16Q9Y3C1 178 aaKnown RBP0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 AP4S1Q9Y587 144 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 TIMM8BQ9Y5J9 83 aaPredicted RBP0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 SERP1Q9Y6X1 66 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 V9GYS6 101 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 PLXNB2O15031 1838 aa0.28□□□□□ -2.36
CDC42SE2-210ENST00000506929 DISP2A7MBM2 1401 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 DAPK1P53355 1430 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 EDC4Q6P2E9 1401 aaKnown RBP0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 SCAPERQ9BY12 1400 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 YTHDC2Q9H6S0 1430 aaKnown RBP0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 TRAPPC8Q9Y2L5 1435 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 ZFHX3Q15911 3703 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 A2ML1A8K2U0 1454 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 ADGRL2O95490 1459 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 PTPRMP28827 1452 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 TCOF1Q13428 1488 aaKnown RBP0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 CCDC18Q5T9S5 1454 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 ARHGAP5Q13017 1502 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 UGGT2Q9NYU1 1516 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 ARHGEF5Q12774 1597 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 DIP2AQ14689 1571 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 MED1Q15648 1581 aaPredicted RBP0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 LAMC3Q9Y6N6 1575 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 DNAJC13O75165 2243 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 SPAG17Q6Q759 2223 aa0.28□□□□□ -2.37
CDC42SE2-210ENST00000506929 NHSL1Q5SYE7 1610 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 MROH1Q8NDA8 1641 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 WIZO95785 1651 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 USP54Q70EL1 1684 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 RGPD1P0DJD0 1748 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 XRN1Q8IZH2 1706 aaKnown RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 A0A1B0GUL6 1792 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 LOC110117498A0A087WWA1 95 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 FXYD6-FXYD2A0A087WZ82 144 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 BORCS7-ASMTA0A0B4J1R7 106 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 TRAV10A0A0B4J240 114 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 TRAV22A0A0B4J277 110 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 IGHV1-24A0A0C4DH33 117 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 LOC101927531A0A1B0GV80 90 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 TCRBV3S1A0A5B6 114 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 C2orf70A6NJV1 201 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 ZNF815PA8K554 130 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 UMAD1C9J7I0 102 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 H3BRM9 83 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 CHKB-CPT1BH3BT56 60 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 SYS1-DBNDD2H3BUS1 97 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 H3BVH4 76 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 J3QR89 54 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 APOC4-APOC2K7ER74 178 aa0.27□□□□□ -2.37
CDC42SE2-210ENST00000506929 M0R233 179 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms