RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 Q6ZRU5 148 aa3.7□□□□□ -1.82
GYPB-205ENST00000505583 INO80EQ8NBZ0 244 aaPredicted RBP3.7□□□□□ -1.82
GYPB-205ENST00000505583 RNF213Q63HN8 5207 aa3.7□□□□□ -1.82
GYPB-205ENST00000505583 TRBV25-1A0A075B6N4 114 aa3.69□□□□□ -1.82
GYPB-205ENST00000505583 hDV102S1A0JD36 115 aa3.69□□□□□ -1.82
GYPB-205ENST00000505583 M0QY20 66 aa3.69□□□□□ -1.82
GYPB-205ENST00000505583 PHOX2AO14813 284 aa3.69□□□□□ -1.82
GYPB-205ENST00000505583 OR5AL1P0C617 328 aa3.69□□□□□ -1.82
GYPB-205ENST00000505583 GZMBP10144 247 aa3.69□□□□□ -1.82
GYPB-205ENST00000505583 CNBPP62633 177 aaKnown RBP3.69□□□□□ -1.82
GYPB-205ENST00000505583 IQCJQ1A5X6 159 aa3.69□□□□□ -1.82
GYPB-205ENST00000505583 SPANXN1Q5VSR9 72 aa3.69□□□□□ -1.82
GYPB-205ENST00000505583 STOML3Q8TAV4 291 aa3.69□□□□□ -1.82
GYPB-205ENST00000505583 SPACA4Q8TDM5 124 aa3.69□□□□□ -1.82
GYPB-205ENST00000505583 A0A0D9SG52 128 aa3.68□□□□□ -1.82
GYPB-205ENST00000505583 SMLR1H3BR10 107 aa3.68□□□□□ -1.82
GYPB-205ENST00000505583 ARPC5O15511 151 aa3.68□□□□□ -1.82
GYPB-205ENST00000505583 CXCL1P09341 107 aa3.68□□□□□ -1.82
GYPB-205ENST00000505583 IGLC6P0CF74 106 aa3.68□□□□□ -1.82
GYPB-205ENST00000505583 NKX2-5P52952 324 aaPredicted RBP3.68□□□□□ -1.82
GYPB-205ENST00000505583 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
GYPB-205ENST00000505583 SUMO4Q6EEV6 95 aa3.68□□□□□ -1.82
GYPB-205ENST00000505583 BAGE2Q86Y30 109 aa3.68□□□□□ -1.82
GYPB-205ENST00000505583 C15orf56Q8N910 161 aa3.68□□□□□ -1.82
GYPB-205ENST00000505583 DPH3Q96FX2 82 aa3.68□□□□□ -1.82
GYPB-205ENST00000505583 TCEAL7Q9BRU2 100 aa3.68□□□□□ -1.82
GYPB-205ENST00000505583 LRP2P98164 4655 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 IGHV3-64A0A075B6Q5 118 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 IGHV1-24A0A0C4DH33 117 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 MGPP08493 103 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 PKIAP61925 76 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 CCL20P78556 96 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 COX6A2Q02221 97 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 TMEM97Q5BJF2 176 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 TMUB2Q71RG4 321 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 PRSS3P2Q8NHM4 247 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 FAM213BQ8TBF2 198 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 SFT2D1Q8WV19 159 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 MBD3L1Q8WWY6 194 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 AP1S3Q96PC3 154 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 PLAC8Q9NZF1 115 aa3.67□□□□□ -1.82
GYPB-205ENST00000505583 TRAV8-4A0A0B4J246 113 aa3.66□□□□□ -1.82
GYPB-205ENST00000505583 IGKV2-24A0A0C4DH68 120 aa3.66□□□□□ -1.82
GYPB-205ENST00000505583 A0A1B0GUV1 79 aa3.66□□□□□ -1.82
GYPB-205ENST00000505583 P01737 135 aa3.66□□□□□ -1.82
GYPB-205ENST00000505583 S100A9P06702 114 aaKnown RBP3.66□□□□□ -1.82
GYPB-205ENST00000505583 SMIM17P0DL12 118 aa3.66□□□□□ -1.82
GYPB-205ENST00000505583 RPL35P42766 123 aaKnown RBP3.66□□□□□ -1.82
GYPB-205ENST00000505583 PRR3P79522 188 aaKnown RBP3.66□□□□□ -1.82
GYPB-205ENST00000505583 HIGD2BQ4VC39 106 aa3.66□□□□□ -1.82
GYPB-205ENST00000505583 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.66□□□□□ -1.82
GYPB-205ENST00000505583 LINC01600Q96MT4 127 aa3.66□□□□□ -1.82
GYPB-205ENST00000505583 TMEM243Q9BU79 118 aa3.66□□□□□ -1.82
GYPB-205ENST00000505583 TPPP3Q9BW30 176 aa3.66□□□□□ -1.82
GYPB-205ENST00000505583 A0A096LNI7 61 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.65□□□□□ -1.83
GYPB-205ENST00000505583 IGKV3OR2-268A0A0C4DH90 116 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 RAB19A4D1S5 217 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 C19orf71A6NCJ1 209 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 KRTAP10-8P60410 259 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 MAJINQ3KP22 176 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 CENPWQ5EE01 88 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 RASL11AQ6T310 242 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 KCNRGQ8N5I3 272 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 FER1L6-AS1Q8NA97 138 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 OR2D3Q8NGH3 330 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 LYPD6BQ8NI32 183 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 GTSF1Q8WW33 167 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 LINC00526Q96FQ7 95 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 RNF185Q96GF1 192 aa3.65□□□□□ -1.83
GYPB-205ENST00000505583 TRBV20OR9-2A0A075B6H5 130 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 TRAV26-2A0A0B4J265 109 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 H7C1H1 209 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 PFDN1O60925 122 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 NDUFS6O75380 124 aaKnown RBP3.64□□□□□ -1.83
GYPB-205ENST00000505583 NTF3P20783 257 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 RPS10P46783 165 aaKnown RBP3.64□□□□□ -1.83
GYPB-205ENST00000505583 AMTP48728 403 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 SULT1A2P50226 295 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 LYZL1Q6UWQ5 148 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 STPG4Q8N801 248 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 CHCHD10Q8WYQ3 142 aaPredicted RBP3.64□□□□□ -1.83
GYPB-205ENST00000505583 C11orf52Q96A22 123 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 PGLYRP4Q96LB8 373 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 NIT2Q9NQR4 276 aa3.64□□□□□ -1.83
GYPB-205ENST00000505583 LPAP08519 4548 aa3.63□□□□□ -1.83
GYPB-205ENST00000505583 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.63□□□□□ -1.83
GYPB-205ENST00000505583 GVQW2A0A096LPI5 108 aaPredicted RBP3.63□□□□□ -1.83
GYPB-205ENST00000505583 A0A0J9YXV3 536 aa3.63□□□□□ -1.83
GYPB-205ENST00000505583 IGKV2-29A2NJV5 120 aaPredicted RBP3.63□□□□□ -1.83
GYPB-205ENST00000505583 UMAD1C9J7I0 102 aa3.63□□□□□ -1.83
GYPB-205ENST00000505583 FOXA3P55318 350 aaPredicted RBP3.63□□□□□ -1.83
GYPB-205ENST00000505583 CACNG7P62955 275 aa3.63□□□□□ -1.83
GYPB-205ENST00000505583 FOXI1Q12951 378 aa3.63□□□□□ -1.83
GYPB-205ENST00000505583 SRSF9Q13242 221 aaKnown RBP eCLIP3.63□□□□□ -1.83
GYPB-205ENST00000505583 COTL1Q14019 142 aa3.63□□□□□ -1.83
GYPB-205ENST00000505583 ZNF345Q14585 488 aa3.63□□□□□ -1.83
GYPB-205ENST00000505583 WDR73Q6P4I2 378 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms