RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 DEFB131AP59861 70 aa5.93□□□□□ -1.46
ATP2C1-208ENST00000504948 UNQ9165/PRO28630Q6UXU0 137 aa5.93□□□□□ -1.46
ATP2C1-208ENST00000504948 SNURFQ9Y675 71 aa5.93□□□□□ -1.46
ATP2C1-208ENST00000504948 NBEAL2Q6ZNJ1 2754 aa5.93□□□□□ -1.46
ATP2C1-208ENST00000504948 IGHV4-28A0A0C4DH34 117 aa5.93□□□□□ -1.46
ATP2C1-208ENST00000504948 I3L3M4 83 aa5.93□□□□□ -1.46
ATP2C1-208ENST00000504948 B9A039 149 aa5.92□□□□□ -1.46
ATP2C1-208ENST00000504948 LEPROTO15243 131 aa5.92□□□□□ -1.46
ATP2C1-208ENST00000504948 SHISA9B4DS77 424 aa5.92□□□□□ -1.46
ATP2C1-208ENST00000504948 DEFB136Q30KP8 78 aa5.92□□□□□ -1.46
ATP2C1-208ENST00000504948 RNF138Q8WVD3 245 aa5.92□□□□□ -1.46
ATP2C1-208ENST00000504948 PRR9Q5T870 116 aa5.92□□□□□ -1.46
ATP2C1-208ENST00000504948 ESM1Q9NQ30 184 aa5.92□□□□□ -1.46
ATP2C1-208ENST00000504948 DEFB130BP0DP73 79 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 DEFB130AP0DP74 79 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 PRR4Q16378 134 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 SOCS3O14543 225 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 NCR3O14931 201 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 INSP01308 110 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 C9orf139Q6ZV77 190 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 LRBAP50851 2863 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 RBMY1BA6NDE4 496 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 RBMY1EA6NEQ0 496 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 BUB3O43684 328 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 RBMY1DP0C7P1 496 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 RBMY1A1P0DJD3 496 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 RBMY1CP0DJD4 496 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 RBMY1FQ15415 496 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 NDUFA7O95182 113 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 RPL35AP18077 110 aaKnown RBP5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 KIR2DL5BQ8NHK3 375 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 FANCD2OSQ96PS1 177 aa5.91□□□□□ -1.46
ATP2C1-208ENST00000504948 IGLV10-54A0A075B6I4 117 aa5.9□□□□□ -1.46
ATP2C1-208ENST00000504948 A0A0J9YXY3 114 aa5.9□□□□□ -1.46
ATP2C1-208ENST00000504948 TMEM141Q96I45 108 aa5.9□□□□□ -1.46
ATP2C1-208ENST00000504948 FAM215AQ9Y5M1 114 aa5.9□□□□□ -1.46
ATP2C1-208ENST00000504948 FASNP49327 2511 aaKnown RBP5.9□□□□□ -1.46
ATP2C1-208ENST00000504948 TRAV25A0A0B4J276 109 aa5.9□□□□□ -1.46
ATP2C1-208ENST00000504948 TMEM30BQ3MIR4 351 aa5.9□□□□□ -1.46
ATP2C1-208ENST00000504948 C5orf47Q569G3 176 aa5.9□□□□□ -1.46
ATP2C1-208ENST00000504948 TOMM6Q96B49 74 aa5.9□□□□□ -1.46
ATP2C1-208ENST00000504948 BPESC1Q9GZL8 116 aa5.9□□□□□ -1.46
ATP2C1-208ENST00000504948 OVOL1O14753 267 aa5.9□□□□□ -1.47
ATP2C1-208ENST00000504948 IGHG4P01861 327 aa5.9□□□□□ -1.47
ATP2C1-208ENST00000504948 NEXN-AS1Q8NBZ9 246 aa5.9□□□□□ -1.47
ATP2C1-208ENST00000504948 A0A1W2PNU3 283 aaPredicted RBP5.9□□□□□ -1.47
ATP2C1-208ENST00000504948 SMIM9A6NGZ8 99 aa5.9□□□□□ -1.47
ATP2C1-208ENST00000504948 GHRHP01286 108 aa5.9□□□□□ -1.47
ATP2C1-208ENST00000504948 BLCAPP62952 87 aa5.9□□□□□ -1.47
ATP2C1-208ENST00000504948 LINC01559Q495D7 138 aa5.9□□□□□ -1.47
ATP2C1-208ENST00000504948 TRGV4A0A0C4DH28 118 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 SLC25A29Q8N8R3 303 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 CDKN2A-AS1Q9UH64 79 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 UBR5O95071 2799 aaPredicted RBP5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 TEX15Q9BXT5 2789 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 LHBP01229 141 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 IGHV3-30P01768 117 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 IGHV3-30-5P0DP03 117 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 SOSTDC1Q6X4U4 206 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 ATP6V0E2Q8NHE4 81 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 SMG1Q96Q15 3661 aaKnown RBP5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 IGLV1-44P01699 117 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 H7C423 109 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 INAFM2P0DMQ5 153 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 CGB3P0DN86 165 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 CGB7P0DN87 165 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 SMAD5-AS1Q9Y6J3 95 aa5.89□□□□□ -1.47
ATP2C1-208ENST00000504948 XCL1P47992 114 aa5.88□□□□□ -1.47
ATP2C1-208ENST00000504948 C4orf26Q17RF5 130 aa5.88□□□□□ -1.47
ATP2C1-208ENST00000504948 APRG1Q8IVJ8 170 aa5.88□□□□□ -1.47
ATP2C1-208ENST00000504948 NRACQ8N912 160 aa5.88□□□□□ -1.47
ATP2C1-208ENST00000504948 PIFOQ8TCI5 191 aa5.88□□□□□ -1.47
ATP2C1-208ENST00000504948 NBPF19A0A087WUL8 3843 aa5.88□□□□□ -1.47
ATP2C1-208ENST00000504948 IGHV7-81A0A0B4J1V7 117 aa5.88□□□□□ -1.47
ATP2C1-208ENST00000504948 C3orf22Q8N5N4 141 aa5.88□□□□□ -1.47
ATP2C1-208ENST00000504948 PRO0461Q9UI25 63 aa5.87□□□□□ -1.47
ATP2C1-208ENST00000504948 CSDC2Q9Y534 153 aaKnown RBP5.87□□□□□ -1.47
ATP2C1-208ENST00000504948 ENHOQ6UWT2 76 aa5.87□□□□□ -1.47
ATP2C1-208ENST00000504948 EDN2P20800 178 aa5.87□□□□□ -1.47
ATP2C1-208ENST00000504948 SEM1Q6ZVN7 128 aa5.87□□□□□ -1.47
ATP2C1-208ENST00000504948 C20orf173Q96LM9 149 aa5.87□□□□□ -1.47
ATP2C1-208ENST00000504948 IGLV11-55A0A075B6I3 123 aa5.87□□□□□ -1.47
ATP2C1-208ENST00000504948 A0A0B4J2C4 111 aa5.87□□□□□ -1.47
ATP2C1-208ENST00000504948 MALP21145 153 aa5.87□□□□□ -1.47
ATP2C1-208ENST00000504948 SND1-IT1Q9HBX3 110 aa5.87□□□□□ -1.47
ATP2C1-208ENST00000504948 UQCRQO14949 82 aa5.86□□□□□ -1.47
ATP2C1-208ENST00000504948 MIR7-3HGQ8N6C7 128 aa5.86□□□□□ -1.47
ATP2C1-208ENST00000504948 FAM110AQ9BQ89 295 aa5.86□□□□□ -1.47
ATP2C1-208ENST00000504948 UBL5Q9BZL1 73 aa5.86□□□□□ -1.47
ATP2C1-208ENST00000504948 RELNP78509 3460 aa5.86□□□□□ -1.47
ATP2C1-208ENST00000504948 CENPVL3A0A0U1RRI6 287 aa5.86□□□□□ -1.47
ATP2C1-208ENST00000504948 TMEM61Q8N0U2 210 aa5.86□□□□□ -1.47
ATP2C1-208ENST00000504948 CLPSL1A2RUU4 121 aa5.86□□□□□ -1.47
ATP2C1-208ENST00000504948 ADAMTSL4-AS1Q5T5F5 129 aa5.86□□□□□ -1.47
ATP2C1-208ENST00000504948 TMEM86BQ8N661 226 aa5.86□□□□□ -1.47
ATP2C1-208ENST00000504948 DEFB105AQ8NG35 78 aa5.86□□□□□ -1.47
ATP2C1-208ENST00000504948 ATOX1O00244 68 aa5.85□□□□□ -1.47
ATP2C1-208ENST00000504948 GATA4P43694 442 aa5.85□□□□□ -1.47
ATP2C1-208ENST00000504948 HILS1P60008 231 aa5.85□□□□□ -1.47
ATP2C1-208ENST00000504948 NOTCH1P46531 2555 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms