RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 SPTBN4Q9H254 2564 aa12.19□□□□□ -0.46
HMGXB3-202ENST00000503427 TMEM258P61165 79 aa12.18□□□□□ -0.46
HMGXB3-202ENST00000503427 MAP6D1Q9H9H5 199 aa12.18□□□□□ -0.46
HMGXB3-202ENST00000503427 NFE4Q86UQ8 179 aa12.18□□□□□ -0.46
HMGXB3-202ENST00000503427 HIVEP3Q5T1R4 2406 aa12.18□□□□□ -0.46
HMGXB3-202ENST00000503427 A0A1B0GX51 115 aa12.18□□□□□ -0.46
HMGXB3-202ENST00000503427 Q6ZUT4 128 aa12.18□□□□□ -0.46
HMGXB3-202ENST00000503427 PTH2Q96A98 100 aa12.18□□□□□ -0.46
HMGXB3-202ENST00000503427 IGHV3-30P01768 117 aa12.18□□□□□ -0.46
HMGXB3-202ENST00000503427 IGHV3-33P01772 117 aa12.18□□□□□ -0.46
HMGXB3-202ENST00000503427 IGHV3-30-5P0DP03 117 aa12.18□□□□□ -0.46
HMGXB3-202ENST00000503427 RPL18AQ02543 176 aaKnown RBP12.18□□□□□ -0.46
HMGXB3-202ENST00000503427 TCL1BO95988 128 aa12.17□□□□□ -0.46
HMGXB3-202ENST00000503427 CRIP1P50238 77 aa12.17□□□□□ -0.46
HMGXB3-202ENST00000503427 WNK1Q9H4A3 2382 aa12.17□□□□□ -0.46
HMGXB3-202ENST00000503427 A0A0J9YXY3 114 aa12.17□□□□□ -0.46
HMGXB3-202ENST00000503427 U3KQK5 164 aa12.17□□□□□ -0.46
HMGXB3-202ENST00000503427 CEMP1Q6PRD7 247 aaPredicted RBP12.17□□□□□ -0.46
HMGXB3-202ENST00000503427 FASNP49327 2511 aaKnown RBP12.16□□□□□ -0.46
HMGXB3-202ENST00000503427 ZFAND3Q9H8U3 227 aa12.16□□□□□ -0.46
HMGXB3-202ENST00000503427 PKIGQ9Y2B9 76 aa12.16□□□□□ -0.46
HMGXB3-202ENST00000503427 ABCA2Q9BZC7 2435 aa12.16□□□□□ -0.46
HMGXB3-202ENST00000503427 ESM1Q9NQ30 184 aa12.16□□□□□ -0.46
HMGXB3-202ENST00000503427 K7EQG2 157 aa12.16□□□□□ -0.46
HMGXB3-202ENST00000503427 ZNF462Q96JM2 2506 aa12.15□□□□□ -0.46
HMGXB3-202ENST00000503427 SPAG11BQ08648 103 aa12.15□□□□□ -0.46
HMGXB3-202ENST00000503427 PRO0255Q9UI72 69 aa12.15□□□□□ -0.47
HMGXB3-202ENST00000503427 COL5A1P20908 1838 aaPredicted RBP12.14□□□□□ -0.47
HMGXB3-202ENST00000503427 PSMB8P28062 276 aa12.14□□□□□ -0.47
HMGXB3-202ENST00000503427 NCR3O14931 201 aa12.14□□□□□ -0.47
HMGXB3-202ENST00000503427 CCL18P55774 89 aa12.14□□□□□ -0.47
HMGXB3-202ENST00000503427 CEP295Q9C0D2 2601 aa12.13□□□□□ -0.47
HMGXB3-202ENST00000503427 C20orf173Q96LM9 149 aa12.13□□□□□ -0.47
HMGXB3-202ENST00000503427 SMAD5-AS1Q9Y6J3 95 aa12.13□□□□□ -0.47
HMGXB3-202ENST00000503427 TMEM256-PLSCR3K7ERE1 68 aa12.13□□□□□ -0.47
HMGXB3-202ENST00000503427 IGLV2-11P01706 119 aa12.13□□□□□ -0.47
HMGXB3-202ENST00000503427 DEFB135Q30KP9 77 aa12.13□□□□□ -0.47
HMGXB3-202ENST00000503427 RNF185Q96GF1 192 aa12.13□□□□□ -0.47
HMGXB3-202ENST00000503427 NREPQ16612 68 aa12.13□□□□□ -0.47
HMGXB3-202ENST00000503427 Q8N6K4 173 aa12.13□□□□□ -0.47
HMGXB3-202ENST00000503427 SRCAPQ6ZRS2 3230 aa12.12□□□□□ -0.47
HMGXB3-202ENST00000503427 P0DMU3 169 aa12.12□□□□□ -0.47
HMGXB3-202ENST00000503427 FAM231AP0DMU4 169 aa12.12□□□□□ -0.47
HMGXB3-202ENST00000503427 FAM231CP0DMU5 169 aa12.12□□□□□ -0.47
HMGXB3-202ENST00000503427 ZFAND2AQ8N6M9 145 aa12.12□□□□□ -0.47
HMGXB3-202ENST00000503427 DIRC1Q969H9 104 aa12.12□□□□□ -0.47
HMGXB3-202ENST00000503427 SPANXB1Q9NS25 103 aaPredicted RBP12.12□□□□□ -0.47
HMGXB3-202ENST00000503427 LINC00643Q86TS7 51 aa12.11□□□□□ -0.47
HMGXB3-202ENST00000503427 SMIM20Q8N5G0 67 aa12.11□□□□□ -0.47
HMGXB3-202ENST00000503427 TP73-AS1Q9UF72 201 aa12.11□□□□□ -0.47
HMGXB3-202ENST00000503427 HIST2H2BDQ6DRA6 164 aa12.11□□□□□ -0.47
HMGXB3-202ENST00000503427 TNRC6BQ9UPQ9 1833 aaKnown RBP12.1□□□□□ -0.47
HMGXB3-202ENST00000503427 IGKV2D-26A0A0A0MRZ7 120 aa12.1□□□□□ -0.47
HMGXB3-202ENST00000503427 ZNF22P17026 224 aaPredicted RBP12.1□□□□□ -0.47
HMGXB3-202ENST00000503427 DEFB114Q30KQ6 69 aa12.1□□□□□ -0.47
HMGXB3-202ENST00000503427 TMEM223A0PJW6 202 aa12.1□□□□□ -0.47
HMGXB3-202ENST00000503427 TIRAPP58753 221 aa12.1□□□□□ -0.47
HMGXB3-202ENST00000503427 KLK12Q9UKR0 248 aa12.1□□□□□ -0.47
HMGXB3-202ENST00000503427 Q6ZSV7 163 aa12.1□□□□□ -0.47
HMGXB3-202ENST00000503427 IGLV4-3A0A075B6K6 122 aa12.09□□□□□ -0.47
HMGXB3-202ENST00000503427 PDE6GP18545 87 aa12.09□□□□□ -0.47
HMGXB3-202ENST00000503427 Q6ZTI0 123 aa12.09□□□□□ -0.47
HMGXB3-202ENST00000503427 MAPKAPK5-AS1Q8N8E1 139 aa12.09□□□□□ -0.47
HMGXB3-202ENST00000503427 PLXNB1O43157 2135 aa12.08□□□□□ -0.47
HMGXB3-202ENST00000503427 LINC00467Q9BRT7 94 aa12.08□□□□□ -0.48
HMGXB3-202ENST00000503427 PSMG3-AS1Q96PY0 264 aa12.08□□□□□ -0.48
HMGXB3-202ENST00000503427 CDKN2A-AS1Q9UH64 79 aa12.08□□□□□ -0.48
HMGXB3-202ENST00000503427 IGHV4-28A0A0C4DH34 117 aa12.08□□□□□ -0.48
HMGXB3-202ENST00000503427 M0QY20 66 aa12.08□□□□□ -0.48
HMGXB3-202ENST00000503427 KIAA1549Q9HCM3 1950 aa12.07□□□□□ -0.48
HMGXB3-202ENST00000503427 DEFB4AO15263 64 aa12.07□□□□□ -0.48
HMGXB3-202ENST00000503427 DSCAML1Q8TD84 2053 aa12.06□□□□□ -0.48
HMGXB3-202ENST00000503427 INAFM1C9JVW0 142 aa12.06□□□□□ -0.48
HMGXB3-202ENST00000503427 H7C423 109 aa12.06□□□□□ -0.48
HMGXB3-202ENST00000503427 NDUFS5O43920 106 aa12.06□□□□□ -0.48
HMGXB3-202ENST00000503427 CDSNQ15517 529 aa12.06□□□□□ -0.48
HMGXB3-202ENST00000503427 J3KT08 172 aa12.06□□□□□ -0.48
HMGXB3-202ENST00000503427 TRBV27A0A0K0K1C4 114 aa12.05□□□□□ -0.48
HMGXB3-202ENST00000503427 C14orf132Q9NPU4 83 aa12.05□□□□□ -0.48
HMGXB3-202ENST00000503427 TRBV6-5A0A0K0K1A5 114 aa12.05□□□□□ -0.48
HMGXB3-202ENST00000503427 SMIM9A6NGZ8 99 aa12.04□□□□□ -0.48
HMGXB3-202ENST00000503427 HIGD2BQ4VC39 106 aa12.04□□□□□ -0.48
HMGXB3-202ENST00000503427 TRAV26-1A0A087WT03 109 aa12.04□□□□□ -0.48
HMGXB3-202ENST00000503427 F8W735 103 aaPredicted RBP12.04□□□□□ -0.48
HMGXB3-202ENST00000503427 MP68P56378 58 aa12.04□□□□□ -0.48
HMGXB3-202ENST00000503427 TEX49A0A1B0GTD5 131 aa12.03□□□□□ -0.48
HMGXB3-202ENST00000503427 NDUFB1O75438 58 aa12.03□□□□□ -0.48
HMGXB3-202ENST00000503427 NRACQ8N912 160 aa12.03□□□□□ -0.48
HMGXB3-202ENST00000503427 ZNF702PQ9H963 129 aa12.03□□□□□ -0.48
HMGXB3-202ENST00000503427 WDR87Q6ZQQ6 2873 aa12.03□□□□□ -0.48
HMGXB3-202ENST00000503427 PYGO1Q9Y3Y4 419 aa12.03□□□□□ -0.48
HMGXB3-202ENST00000503427 COX7BP24311 80 aa12.02□□□□□ -0.48
HMGXB3-202ENST00000503427 UFSP1Q6NVU6 142 aa12.02□□□□□ -0.48
HMGXB3-202ENST00000503427 C2orf91Q6ZV80 131 aa12.02□□□□□ -0.48
HMGXB3-202ENST00000503427 JMJD1CQ15652 2540 aa12.02□□□□□ -0.48
HMGXB3-202ENST00000503427 ANKRD11Q6UB99 2663 aaPredicted RBP12.02□□□□□ -0.48
HMGXB3-202ENST00000503427 TRBV30A0A0K0K1B3 111 aa12.02□□□□□ -0.48
HMGXB3-202ENST00000503427 CFAP126Q5VTH2 177 aa12.02□□□□□ -0.49
HMGXB3-202ENST00000503427 LINC00308Q8TCZ7 52 aa12.02□□□□□ -0.49
HMGXB3-202ENST00000503427 MT-ATP8P03928 68 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms