RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 RETNQ9HD89 108 aa5.74□□□□□ -1.49
TOPBP1-202ENST00000503338 CELA1Q9UNI1 258 aa5.74□□□□□ -1.49
TOPBP1-202ENST00000503338 MGAM2Q2M2H8 2515 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 TRAV26-1A0A087WT03 109 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 GAGE12JA6NER3 117 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 F5H768 121 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 H3BNG1 76 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 SYS1-DBNDD2H3BUS1 97 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 H7C423 109 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 J3QL48 77 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 SCGB1D1O95968 90 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 TSHBP01222 138 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 C3orf79P0CE67 100 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 GAGE1Q13065 139 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 GAGE4Q13068 117 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 GAGE5Q13069 117 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 GAGE13Q4V321 117 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 NEGR1Q7Z3B1 354 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 C11orf45Q8TAV5 145 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 TMEM141Q96I45 108 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 SCGB3A1Q96QR1 104 aa5.73□□□□□ -1.49
TOPBP1-202ENST00000503338 A0A0J9YWU9 116 aa5.72□□□□□ -1.49
TOPBP1-202ENST00000503338 LINC00694P0DN24 101 aa5.72□□□□□ -1.49
TOPBP1-202ENST00000503338 GYPEP15421 78 aa5.72□□□□□ -1.49
TOPBP1-202ENST00000503338 S100A12P80511 92 aa5.72□□□□□ -1.49
TOPBP1-202ENST00000503338 MRPL23Q16540 153 aaKnown RBP5.72□□□□□ -1.49
TOPBP1-202ENST00000503338 C12orf74Q32Q52 190 aa5.72□□□□□ -1.49
TOPBP1-202ENST00000503338 PYY3Q5JQD4 70 aa5.72□□□□□ -1.49
TOPBP1-202ENST00000503338 Q6ZN92 141 aa5.72□□□□□ -1.49
TOPBP1-202ENST00000503338 C20orf203Q8NBC4 194 aa5.72□□□□□ -1.49
TOPBP1-202ENST00000503338 ATP6V0E2Q8NHE4 81 aa5.72□□□□□ -1.49
TOPBP1-202ENST00000503338 SPANXA1Q9NS26 97 aa5.72□□□□□ -1.49
TOPBP1-202ENST00000503338 PYGO1Q9Y3Y4 419 aa5.72□□□□□ -1.49
TOPBP1-202ENST00000503338 TRBV25-1A0A075B6N4 114 aa5.71□□□□□ -1.5
TOPBP1-202ENST00000503338 TRAV12-1A0A0B4J245 112 aa5.71□□□□□ -1.5
TOPBP1-202ENST00000503338 PRSS1P07477 247 aa5.71□□□□□ -1.5
TOPBP1-202ENST00000503338 LGALS9CQ6DKI2 356 aa5.71□□□□□ -1.5
TOPBP1-202ENST00000503338 LINC00518Q8N0U6 118 aa5.71□□□□□ -1.5
TOPBP1-202ENST00000503338 PHLDA1Q8WV24 401 aaPredicted RBP5.71□□□□□ -1.5
TOPBP1-202ENST00000503338 C12orf57Q99622 126 aa5.71□□□□□ -1.5
TOPBP1-202ENST00000503338 TIMM21Q9BVV7 248 aa5.71□□□□□ -1.5
TOPBP1-202ENST00000503338 ICOSQ9Y6W8 199 aa5.71□□□□□ -1.5
TOPBP1-202ENST00000503338 IGHV3-38A0A0C4DH36 116 aa5.7□□□□□ -1.5
TOPBP1-202ENST00000503338 IGIPA6NJ69 53 aa5.7□□□□□ -1.5
TOPBP1-202ENST00000503338 UBE2L6O14933 153 aa5.7□□□□□ -1.5
TOPBP1-202ENST00000503338 PKIAP61925 76 aa5.7□□□□□ -1.5
TOPBP1-202ENST00000503338 LINC01545Q5VT33 79 aa5.7□□□□□ -1.5
TOPBP1-202ENST00000503338 TMEM243Q9BU79 118 aa5.7□□□□□ -1.5
TOPBP1-202ENST00000503338 CHCHD7Q9BUK0 85 aa5.7□□□□□ -1.5
TOPBP1-202ENST00000503338 Q9UF83 564 aa5.7□□□□□ -1.5
TOPBP1-202ENST00000503338 CSDC2Q9Y534 153 aaKnown RBP5.7□□□□□ -1.5
TOPBP1-202ENST00000503338 TRBV6-8A0A0A6YYG3 113 aa5.69□□□□□ -1.5
TOPBP1-202ENST00000503338 TRAV10A0A0B4J240 114 aa5.69□□□□□ -1.5
TOPBP1-202ENST00000503338 LOC100131303A0A0U1RQF7 123 aa5.69□□□□□ -1.5
TOPBP1-202ENST00000503338 HTN3P15516 51 aa5.69□□□□□ -1.5
TOPBP1-202ENST00000503338 ZNF25P17030 456 aaPredicted RBP5.69□□□□□ -1.5
TOPBP1-202ENST00000503338 TIRAPP58753 221 aa5.69□□□□□ -1.5
TOPBP1-202ENST00000503338 Q6ZTC4 211 aa5.69□□□□□ -1.5
TOPBP1-202ENST00000503338 LINC00173Q6ZV60 143 aa5.69□□□□□ -1.5
TOPBP1-202ENST00000503338 MRPL52Q86TS9 123 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-202ENST00000503338 VSIG2Q96IQ7 327 aa5.69□□□□□ -1.5
TOPBP1-202ENST00000503338 NOTCH1P46531 2555 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 A0A087WX48 190 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 DEFB131BA0A096LNP1 70 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 A0A0J9YY99 117 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 HSBP1L1C9JCN9 74 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 H0Y8G0 127 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 PLNP26678 52 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 RPL39P62891 51 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 MRPS36P82909 103 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 PMVKQ15126 192 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 DGAT2L7PQ6IED9 249 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 TEX43Q6ZNM6 134 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 C15orf53Q8NAA6 179 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 BAALCQ8WXS3 180 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 TMEM101Q96IK0 257 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 VCX2Q9H322 139 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 UBE2D4Q9Y2X8 147 aa5.68□□□□□ -1.5
TOPBP1-202ENST00000503338 F8VRH5 84 aa5.67□□□□□ -1.5
TOPBP1-202ENST00000503338 NANOS2P60321 138 aaKnown RBP5.67□□□□□ -1.5
TOPBP1-202ENST00000503338 DEFA6Q01524 100 aa5.67□□□□□ -1.5
TOPBP1-202ENST00000503338 ODF1Q14990 250 aa5.67□□□□□ -1.5
TOPBP1-202ENST00000503338 AMMECR1LQ6DCA0 310 aa5.67□□□□□ -1.5
TOPBP1-202ENST00000503338 NTM-AS1Q6ZSK4 140 aa5.67□□□□□ -1.5
TOPBP1-202ENST00000503338 Q8N976 141 aa5.67□□□□□ -1.5
TOPBP1-202ENST00000503338 C2orf88Q9BSF0 95 aa5.67□□□□□ -1.5
TOPBP1-202ENST00000503338 VAMP8Q9BV40 100 aa5.67□□□□□ -1.5
TOPBP1-202ENST00000503338 CMYA5Q8N3K9 4069 aa5.67□□□□□ -1.5
TOPBP1-202ENST00000503338 PKD1L1Q8TDX9 2849 aa5.67□□□□□ -1.5
TOPBP1-202ENST00000503338 DNAH3Q8TD57 4116 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 IGLV4-3A0A075B6K6 122 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 TRAV9-2A0A087WT02 112 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 A0A096LPF7 62 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 IGKV2-29A2NJV5 120 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 PRSS29PA6NIE9 313 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 DPM2O94777 84 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 IGKCP01834 107 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 FGF6P10767 208 aa5.66□□□□□ -1.5
TOPBP1-202ENST00000503338 SEC11AP67812 179 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms