RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 J3QR89 54 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 SRIP30626 198 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 GNG4P50150 75 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 FXYD2P54710 66 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 RHOGP84095 191 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 SLC38A11Q08AI6 406 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 DEFB112Q30KQ8 113 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 CLLU1Q5K131 121 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 OR2T2Q6IF00 324 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 NUP35Q8NFH5 326 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 GPR146Q96CH1 333 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 C2orf50Q96LR7 162 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 GPX7Q96SL4 187 aaPredicted RBP2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 Q9H521 79 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 RERGLQ9H628 205 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 IER3IP1Q9Y5U9 82 aa2.34□□□□□ -2.03
HMGB1P3-201ENST00000502802 MEIS3P1A6NDR6 274 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 M0R2Z0 102 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 NAPSAO96009 420 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 IFNA7P01567 189 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 TRGC1P0CF51 173 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 HIST1H1DP16402 221 aaKnown RBP2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 Q6Q795 121 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 MIR17HGQ75NE6 70 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 ARPINQ7Z6K5 226 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 BPIFA4PQ86YQ2 179 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 OR8B3Q8NGG8 313 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 TP53RKQ96S44 253 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 TVP23BQ9NYZ1 205 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 LAMTOR2Q9Y2Q5 125 aa2.33□□□□□ -2.04
HMGB1P3-201ENST00000502802 TRAV5A0A0B4J249 113 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 C1orf196B1AJZ1 125 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 M0R135 149 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 GNG7O60262 68 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 NCR2O95944 276 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 GYPAP02724 150 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 S100A4P26447 101 aaKnown RBP2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 RPS27P42677 84 aaKnown RBP2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 AQP4P55087 323 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 DEFA3P59666 94 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 GNG5P63218 68 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 EIF5AP63241 154 aaKnown RBP2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 NEDD8Q15843 81 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 GLYATL3Q5SZD4 288 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 ZNF826PQ6ZT77 177 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 TCTE3Q8IZS6 198 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 SPACA4Q8TDM5 124 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 S100ZQ8WXG8 99 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 KMT2CQ8NEZ4 4911 aaKnown RBP2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 TENM3Q9P273 2699 aa2.32□□□□□ -2.04
HMGB1P3-201ENST00000502802 CLPSL1A2RUU4 121 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 CCL25O15444 150 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 OR2H2O95918 312 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 GYPBP06028 91 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 SMIM11AP58511 58 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 RPS25P62851 125 aaKnown RBP2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 PRB3Q04118 309 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 EIF5AL1Q6IS14 154 aaKnown RBP2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 VMO1Q7Z5L0 202 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 OR8I2Q8N0Y5 310 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 TMEM229BQ8NBD8 167 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 OR8D4Q8NGM9 314 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 SLAMF6Q96DU3 332 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 ADAT3Q96EY9 351 aaPredicted RBP2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 GINS4Q9BRT9 223 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 ADAT1Q9BUB4 502 aaKnown RBP2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 SNHG12Q9BXW3 62 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 KAAG1Q9UBP8 84 aa2.31□□□□□ -2.04
HMGB1P3-201ENST00000502802 SORL1Q92673 2214 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 TRAV4A0A0B4J268 109 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 DUXBA0A1W2PPF3 345 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 RIIAD1A6NNX1 92 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 C9JAW5 83 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 TFF1P04155 84 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 BRS3P32247 399 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 HIST1H1AQ02539 215 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 KLRD1Q13241 179 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 LINC01590Q5TEZ4 76 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 GTF2H5Q6ZYL4 71 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 TRAPPC6BQ86SZ2 158 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 KRTAP13-1Q8IUC0 172 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 HIST3H2BBQ8N257 126 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 FAM216BQ8N7L0 139 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 SPTSSAQ969W0 71 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 AMELYQ99218 206 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 LPAR5Q9H1C0 372 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 HIGD1AQ9Y241 93 aa2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 NOP16Q9Y3C1 178 aaKnown RBP2.3□□□□□ -2.04
HMGB1P3-201ENST00000502802 DNAH7Q8WXX0 4024 aa2.29□□□□□ -2.04
HMGB1P3-201ENST00000502802 TRBV19A0A075B6N1 114 aa2.29□□□□□ -2.04
HMGB1P3-201ENST00000502802 J3QRK9 145 aa2.29□□□□□ -2.04
HMGB1P3-201ENST00000502802 NPFFO15130 113 aa2.29□□□□□ -2.04
HMGB1P3-201ENST00000502802 NDUFB3O43676 98 aa2.29□□□□□ -2.04
HMGB1P3-201ENST00000502802 DPM2O94777 84 aa2.29□□□□□ -2.04
HMGB1P3-201ENST00000502802 GPX1P07203 203 aa2.29□□□□□ -2.04
HMGB1P3-201ENST00000502802 KRTAP5-9P26371 169 aa2.29□□□□□ -2.04
HMGB1P3-201ENST00000502802 CAV3P56539 151 aa2.29□□□□□ -2.04
HMGB1P3-201ENST00000502802 YPEL3P61236 119 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P3-201ENST00000502802 ZNF846Q147U1 533 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms