RNA–Protein interactions for RNA: ENST00000498419.5

PUM1-211, Transcript of pumilio RNA binding family member 1, human

TSL 5

Gene PUM1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-211	ENST00000498419	PMVK	Q15126	192 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	TAL2	Q16559	108 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	TMEM141	Q96I45	108 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	TRGV11	A0A075B6L2	103 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	FABP2	P12104	132 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	SMAGP	Q0VAQ4	97 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	C12orf74	Q32Q52	190 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	TRPT1	Q86TN4	253 aa	Known RBP	4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	ZNRF2	Q8NHG8	242 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	SPATA3	Q8NHX4	192 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	DYNLRB2	Q8TF09	96 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	TIMM17A	Q99595	171 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	ZNF815P	A8K554	130 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419		A8MTW9	85 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419		Q9UF83	564 aa		4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.93	□□□□□ -1.62
PUM1-211	ENST00000498419	COL6A5	A8TX70	2615 aa		4.92	□□□□□ -1.62
PUM1-211	ENST00000498419		A0A1B0GV72	72 aa		4.92	□□□□□ -1.62
PUM1-211	ENST00000498419	IGLL5	B9A064	214 aa		4.92	□□□□□ -1.62
PUM1-211	ENST00000498419	TSPEAR-AS2	P59090	65 aa		4.92	□□□□□ -1.62
PUM1-211	ENST00000498419	GTSF1L	Q9H1H1	148 aa		4.92	□□□□□ -1.62
PUM1-211	ENST00000498419	TRAV26-1	A0A087WT03	109 aa		4.92	□□□□□ -1.62
PUM1-211	ENST00000498419	CRLF1	O75462	422 aa		4.92	□□□□□ -1.62
PUM1-211	ENST00000498419		Q6ZSN1	163 aa		4.92	□□□□□ -1.62
PUM1-211	ENST00000498419	MAP6D1	Q9H9H5	199 aa		4.92	□□□□□ -1.62
PUM1-211	ENST00000498419	ADARB2-AS1	A8MUL3	147 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419		I3L3M4	83 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	DEFB114	Q30KQ6	69 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	C16orf95	Q9H693	158 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	PEMT	Q9UBM1	199 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	PKD1L1	Q8TDX9	2849 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	LINC01549	A6NIU2	74 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	CRYBA4	P53673	196 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	RHOH	Q15669	191 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	TMEM170B	Q5T4T1	132 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	C20orf203	Q8NBC4	194 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	OR5A1	Q8NGJ0	315 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	WFDC10A	Q9H1F0	79 aa		4.91	□□□□□ -1.62
PUM1-211	ENST00000498419	TRAV2	A0A0B4J234	112 aa		4.9	□□□□□ -1.62
PUM1-211	ENST00000498419		A0A1B0GWB2	263 aa		4.9	□□□□□ -1.62
PUM1-211	ENST00000498419	PAPPA-AS1	Q5QFB9	102 aa		4.9	□□□□□ -1.62
PUM1-211	ENST00000498419	SCGB1D4	Q6XE38	83 aa		4.9	□□□□□ -1.62
PUM1-211	ENST00000498419	FAM104A	Q969W3	186 aa		4.9	□□□□□ -1.62
PUM1-211	ENST00000498419	SPAG8	Q99932	426 aa	Predicted RBP	4.9	□□□□□ -1.62
PUM1-211	ENST00000498419	IGLV4-3	A0A075B6K6	122 aa		4.9	□□□□□ -1.63
PUM1-211	ENST00000498419		A0A0J9YY99	117 aa		4.9	□□□□□ -1.63
PUM1-211	ENST00000498419	FHL3	Q13643	280 aa		4.9	□□□□□ -1.63
PUM1-211	ENST00000498419	C11orf72	Q8NBR9	251 aa		4.9	□□□□□ -1.63
PUM1-211	ENST00000498419	ZNF479	Q96JC4	524 aa		4.9	□□□□□ -1.63
PUM1-211	ENST00000498419	AMELX	Q99217	191 aa		4.9	□□□□□ -1.63
PUM1-211	ENST00000498419		M0R2P5	195 aa		4.89	□□□□□ -1.63
PUM1-211	ENST00000498419	HERVK_113	P61574	105 aa		4.89	□□□□□ -1.63
PUM1-211	ENST00000498419	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.89	□□□□□ -1.63
PUM1-211	ENST00000498419	SHISA2	Q6UWI4	295 aa		4.89	□□□□□ -1.63
PUM1-211	ENST00000498419	NFE4	Q86UQ8	179 aa		4.89	□□□□□ -1.63
PUM1-211	ENST00000498419		A0A0J9YXV3	536 aa		4.89	□□□□□ -1.63
PUM1-211	ENST00000498419	AZU1	P20160	251 aa		4.89	□□□□□ -1.63
PUM1-211	ENST00000498419	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
PUM1-211	ENST00000498419	RRN3P1	Q2M238	152 aa		4.89	□□□□□ -1.63
PUM1-211	ENST00000498419	CFAP126	Q5VTH2	177 aa		4.89	□□□□□ -1.63
PUM1-211	ENST00000498419	LINC01587	Q99440	93 aa		4.89	□□□□□ -1.63
PUM1-211	ENST00000498419	EDA2R	Q9HAV5	297 aa		4.89	□□□□□ -1.63
PUM1-211	ENST00000498419	MRPL16	Q9NX20	251 aa	Known RBP	4.89	□□□□□ -1.63
PUM1-211	ENST00000498419	IGHV3-64	A0A075B6Q5	118 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	NDUFA7	O95182	113 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	PF4	P02776	101 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	ZNF415	Q09FC8	603 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	ODF3L2	Q3SX64	289 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	TMEM223	A0PJW6	202 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419		A8MWV9	139 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419		H3BMG7	143 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419		J3QQQ9	107 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	CKS1B	P61024	79 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	TNFRSF18	Q9Y5U5	241 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	IGHV3OR16-12	A0A075B7B8	117 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	ZNF22	P17026	224 aa	Predicted RBP	4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	UBE2D1	P51668	147 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	RPL24	P83731	157 aa	Known RBP	4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	RNASE13	Q5GAN3	156 aa	Known RBP	4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	VCX2	Q9H322	139 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419	XCL2	Q9UBD3	114 aa		4.88	□□□□□ -1.63
PUM1-211	ENST00000498419		G3V4G9	280 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	RHOD	O00212	210 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	INS	P01308	110 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	WFDC2	Q14508	124 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	LINC00467	Q9BRT7	94 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	CHCHD7	Q9BUK0	85 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	PGPEP1	Q9NXJ5	209 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	IGHV3-38	A0A0C4DH36	116 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	IGHV3-30	P01768	117 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	IGHV3-30-5	P0DP03	117 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	MTURN	Q8N3F0	131 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	SLC25A29	Q8N8R3	303 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	PTH2	Q96A98	100 aa		4.87	□□□□□ -1.63
PUM1-211	ENST00000498419	LEPROT	O15243	131 aa		4.86	□□□□□ -1.63
PUM1-211	ENST00000498419	LGALS3	P17931	250 aa	Known RBP	4.86	□□□□□ -1.63
PUM1-211	ENST00000498419	BEAN1	Q3B7T3	259 aa		4.86	□□□□□ -1.63
PUM1-211	ENST00000498419	PIK3CD-AS1	Q5SR53	167 aa		4.86	□□□□□ -1.63
PUM1-211	ENST00000498419	SFTA2	Q6UW10	78 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms