RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 M0R381 172 aa8.58□□□□□ -1.04
SNRNP200-208ENST00000497539 NXPH4O95158 308 aa8.58□□□□□ -1.04
SNRNP200-208ENST00000497539 SYNJ2BPP57105 145 aa8.58□□□□□ -1.04
SNRNP200-208ENST00000497539 ANKRD29Q8N6D5 301 aa8.58□□□□□ -1.04
SNRNP200-208ENST00000497539 IMUPQ9GZP8 106 aa8.58□□□□□ -1.04
SNRNP200-208ENST00000497539 PKIGQ9Y2B9 76 aa8.58□□□□□ -1.04
SNRNP200-208ENST00000497539 PTPN13Q12923 2485 aa8.58□□□□□ -1.04
SNRNP200-208ENST00000497539 TRBV7-3A0A075B6L6 115 aa8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 RPL11P62913 178 aaKnown RBP8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 LINC00336Q6ZUF6 198 aa8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 RPL39LQ96EH5 51 aaKnown RBP8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 SCGB3A1Q96QR1 104 aa8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 TENM4Q6N022 2769 aa8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 APCP25054 2843 aa8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 A0A0J9YX75 114 aa8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 OXTP01178 125 aa8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 RNASE1P07998 156 aaKnown RBP8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 CD7P09564 240 aa8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 SNRPD3P62318 126 aaKnown RBP8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 POM121L12Q8N7R1 296 aa8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 NAV2Q8IVL1 2488 aa8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 ATP5G1P05496 136 aa8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 SCGB1C2P0DMR2 95 aa8.57□□□□□ -1.04
SNRNP200-208ENST00000497539 MYMXA0A1B0GTQ4 84 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 H7C1H1 209 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 UBE2D3P61077 147 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 TMEM258P61165 79 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 UBE2D2P62837 147 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 KLHL30-AS1Q8NEE0 82 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 LINC01600Q96MT4 127 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 PEMTQ9UBM1 199 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 CRYBG3Q68DQ2 2970 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 F8VRH5 84 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 PLNP26678 52 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 C1orf195Q5TG92 126 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 LYRM7Q5U5X0 104 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 C14orf178Q8N769 122 aaPredicted RBP8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 PLEKHB2Q96CS7 222 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 ESM1Q9NQ30 184 aa8.56□□□□□ -1.04
SNRNP200-208ENST00000497539 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
SNRNP200-208ENST00000497539 F6UB75 175 aa8.55□□□□□ -1.04
SNRNP200-208ENST00000497539 ZFP2Q6ZN57 461 aa8.55□□□□□ -1.04
SNRNP200-208ENST00000497539 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
SNRNP200-208ENST00000497539 SMIM2Q9BVW6 85 aa8.55□□□□□ -1.04
SNRNP200-208ENST00000497539 LINC01549A6NIU2 74 aa8.55□□□□□ -1.04
SNRNP200-208ENST00000497539 PDZD2O15018 2839 aa8.54□□□□□ -1.04
SNRNP200-208ENST00000497539 MGPP08493 103 aa8.54□□□□□ -1.04
SNRNP200-208ENST00000497539 TP53TG1Q9Y2A0 90 aa8.54□□□□□ -1.04
SNRNP200-208ENST00000497539 IGKV3-7A0A075B6H7 116 aa8.54□□□□□ -1.04
SNRNP200-208ENST00000497539 COX7CP15954 63 aa8.54□□□□□ -1.04
SNRNP200-208ENST00000497539 PSMB2P49721 201 aa8.54□□□□□ -1.04
SNRNP200-208ENST00000497539 SCGB1D4Q6XE38 83 aa8.54□□□□□ -1.04
SNRNP200-208ENST00000497539 C18orf65Q6ZTR6 163 aa8.54□□□□□ -1.04
SNRNP200-208ENST00000497539 C9orf85Q96MD7 179 aa8.54□□□□□ -1.04
SNRNP200-208ENST00000497539 POLQO75417 2590 aa8.53□□□□□ -1.04
SNRNP200-208ENST00000497539 ZNF815PA8K554 130 aa8.53□□□□□ -1.04
SNRNP200-208ENST00000497539 RNASE4P34096 147 aaKnown RBP8.53□□□□□ -1.04
SNRNP200-208ENST00000497539 SLURP1P55000 103 aa8.53□□□□□ -1.04
SNRNP200-208ENST00000497539 SRSF9Q13242 221 aaKnown RBP eCLIP8.53□□□□□ -1.04
SNRNP200-208ENST00000497539 CSPG4Q6UVK1 2322 aa8.53□□□□□ -1.04
SNRNP200-208ENST00000497539 SUMO2P61956 95 aaKnown RBP8.53□□□□□ -1.04
SNRNP200-208ENST00000497539 NEXN-AS1Q8NBZ9 246 aa8.53□□□□□ -1.04
SNRNP200-208ENST00000497539 RNASE3P12724 160 aaKnown RBP8.52□□□□□ -1.05
SNRNP200-208ENST00000497539 S100A4P26447 101 aaKnown RBP8.52□□□□□ -1.05
SNRNP200-208ENST00000497539 C2orf66Q6UXQ4 117 aa8.52□□□□□ -1.05
SNRNP200-208ENST00000497539 FAM236DA0A1B0GTK5 79 aa8.52□□□□□ -1.05
SNRNP200-208ENST00000497539 J3QQQ9 107 aa8.52□□□□□ -1.05
SNRNP200-208ENST00000497539 FAM236CP0DP71 79 aa8.52□□□□□ -1.05
SNRNP200-208ENST00000497539 CREBBPQ92793 2442 aa8.51□□□□□ -1.05
SNRNP200-208ENST00000497539 GNRH2O43555 120 aa8.51□□□□□ -1.05
SNRNP200-208ENST00000497539 HILS1P60008 231 aa8.51□□□□□ -1.05
SNRNP200-208ENST00000497539 TOMM6Q96B49 74 aa8.51□□□□□ -1.05
SNRNP200-208ENST00000497539 CSMD2Q7Z408 3487 aa8.51□□□□□ -1.05
SNRNP200-208ENST00000497539 TRAV8-4A0A0B4J246 113 aa8.51□□□□□ -1.05
SNRNP200-208ENST00000497539 RPL13AP40429 203 aaKnown RBP8.51□□□□□ -1.05
SNRNP200-208ENST00000497539 ITPR3Q14573 2671 aa8.51□□□□□ -1.05
SNRNP200-208ENST00000497539 TRAV12-1A0A0B4J245 112 aa8.5□□□□□ -1.05
SNRNP200-208ENST00000497539 TRACP01848 142 aa8.5□□□□□ -1.05
SNRNP200-208ENST00000497539 PFN2P35080 140 aa8.5□□□□□ -1.05
SNRNP200-208ENST00000497539 PHLDA3Q9Y5J5 127 aa8.5□□□□□ -1.05
SNRNP200-208ENST00000497539 BAHCC1Q9P281 2608 aa8.5□□□□□ -1.05
SNRNP200-208ENST00000497539 ABCA12Q86UK0 2595 aa8.5□□□□□ -1.05
SNRNP200-208ENST00000497539 A8MZ25 164 aa8.5□□□□□ -1.05
SNRNP200-208ENST00000497539 DEFB136Q30KP8 78 aa8.5□□□□□ -1.05
SNRNP200-208ENST00000497539 ORMDL2Q53FV1 153 aa8.5□□□□□ -1.05
SNRNP200-208ENST00000497539 FAM19A1Q7Z5A9 133 aa8.5□□□□□ -1.05
SNRNP200-208ENST00000497539 C2orf48Q96LS8 159 aa8.5□□□□□ -1.05
SNRNP200-208ENST00000497539 DPH3P1Q9H4G8 78 aa8.5□□□□□ -1.05
SNRNP200-208ENST00000497539 DOPEY2Q9Y3R5 2298 aa8.49□□□□□ -1.05
SNRNP200-208ENST00000497539 Q8N1Y9 231 aa8.49□□□□□ -1.05
SNRNP200-208ENST00000497539 CENPEQ02224 2701 aa8.49□□□□□ -1.05
SNRNP200-208ENST00000497539 FAM240AA0A1B0GVK7 77 aa8.49□□□□□ -1.05
SNRNP200-208ENST00000497539 DEFB114Q30KQ6 69 aa8.49□□□□□ -1.05
SNRNP200-208ENST00000497539 LINC00467Q9BRT7 94 aa8.49□□□□□ -1.05
SNRNP200-208ENST00000497539 KIF25-AS1Q9Y6Z4 181 aa8.49□□□□□ -1.05
SNRNP200-208ENST00000497539 TRGV11A0A075B6L2 103 aa8.48□□□□□ -1.05
SNRNP200-208ENST00000497539 PRIMA1Q86XR5 153 aa8.48□□□□□ -1.05
SNRNP200-208ENST00000497539 LINC01006Q8NI28 216 aa8.48□□□□□ -1.05
SNRNP200-208ENST00000497539 IGHV3-16A0A0C4DH30 117 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms