RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 TRAV1-1A0A0B4J248 108 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 hDV103S1A0JD37 113 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 A8MU10 97 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 FXYD1O00168 92 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 IGKV2D-28P01615 120 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 FREM3P0C091 2139 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 BAALC-AS2P0C853 105 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 PCBD1P61457 104 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 Q8N2B8 174 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 C10orf82Q8WW14 230 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 NDUFB11Q9NX14 153 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 MPC1Q9Y5U8 109 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 UNC79Q9P2D8 2635 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 SPTAN1Q13813 2472 aaKnown RBP3.42□□□□□ -1.86
BRCA1-224ENST00000497488 DNAJC13O75165 2243 aa3.42□□□□□ -1.86
BRCA1-224ENST00000497488 DIDO1Q9BTC0 2240 aaKnown RBP3.42□□□□□ -1.86
BRCA1-224ENST00000497488 PDZD2O15018 2839 aa3.41□□□□□ -1.86
BRCA1-224ENST00000497488 AKAP9Q99996 3911 aa3.41□□□□□ -1.86
BRCA1-224ENST00000497488 M0R233 179 aa3.41□□□□□ -1.86
BRCA1-224ENST00000497488 HINT1P49773 126 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-224ENST00000497488 GNG4P50150 75 aa3.41□□□□□ -1.86
BRCA1-224ENST00000497488 PPP3R1P63098 170 aa3.41□□□□□ -1.86
BRCA1-224ENST00000497488 ERHP84090 104 aaKnown RBP3.41□□□□□ -1.86
BRCA1-224ENST00000497488 CDK6Q00534 326 aa3.41□□□□□ -1.86
BRCA1-224ENST00000497488 C1orf134Q5TEV5 83 aa3.41□□□□□ -1.86
BRCA1-224ENST00000497488 OR5AS1Q8N127 324 aa3.41□□□□□ -1.86
BRCA1-224ENST00000497488 OR2T35Q8NGX2 323 aa3.41□□□□□ -1.86
BRCA1-224ENST00000497488 ZNF563Q8TA94 476 aa3.41□□□□□ -1.86
BRCA1-224ENST00000497488 SAR1AQ9NR31 198 aa3.41□□□□□ -1.86
BRCA1-224ENST00000497488 CACNA1CQ13936 2221 aa3.4□□□□□ -1.86
BRCA1-224ENST00000497488 LRCOL1A6NCL2 159 aa3.4□□□□□ -1.87
BRCA1-224ENST00000497488 DEFB108AA8MXU0 73 aa3.4□□□□□ -1.87
BRCA1-224ENST00000497488 IBA57-AS1B1ANH7 110 aa3.4□□□□□ -1.87
BRCA1-224ENST00000497488 CCDC179H3BU77 68 aa3.4□□□□□ -1.87
BRCA1-224ENST00000497488 RTL8CO15255 209 aa3.4□□□□□ -1.87
BRCA1-224ENST00000497488 TRACP01848 142 aa3.4□□□□□ -1.87
BRCA1-224ENST00000497488 MIFP14174 115 aa3.4□□□□□ -1.87
BRCA1-224ENST00000497488 LINC00471Q8N535 108 aa3.4□□□□□ -1.87
BRCA1-224ENST00000497488 OR4X2Q8NGF9 303 aa3.4□□□□□ -1.87
BRCA1-224ENST00000497488 ZFP30Q9Y2G7 519 aa3.4□□□□□ -1.87
BRCA1-224ENST00000497488 RP1L1Q8IWN7 2480 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-224ENST00000497488 APCP25054 2843 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 CELSR1Q9NYQ6 3014 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 SPTBN1Q01082 2364 aaKnown RBP3.39□□□□□ -1.87
BRCA1-224ENST00000497488 HRNRQ86YZ3 2850 aaPredicted RBP3.39□□□□□ -1.87
BRCA1-224ENST00000497488 OTOGQ6ZRI0 2925 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 A0A1B0GWA3 101 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 SNAPC5O75971 98 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 CRPP02741 224 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 RBP4P02753 201 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 ASB16-AS1Q495Z4 193 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 MED12LQ86YW9 2145 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 KCNRGQ8N5I3 272 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 CMTM2Q8TAZ6 248 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 SLC50A1Q9BRV3 221 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 RERGLQ9H628 205 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 PRO2289Q9P1D8 64 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 LHFPL6Q9Y693 200 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 PCNX1Q96RV3 2341 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 LRBAP50851 2863 aa3.39□□□□□ -1.87
BRCA1-224ENST00000497488 TRAV12-2A0A075B6T6 113 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 PNMA8CA0A1B0GUJ8 204 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 CPSF4LA6NMK7 179 aaKnown RBP3.38□□□□□ -1.87
BRCA1-224ENST00000497488 IFITM5A6NNB3 132 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 YPEL1O60688 119 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 UBL3O95164 117 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 CTSGP08311 255 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 CKS2P33552 79 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 GNGT1P63211 74 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 CIRBPQ14011 172 aaKnown RBP3.38□□□□□ -1.87
BRCA1-224ENST00000497488 TEX261Q6UWH6 196 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 C9orf163Q8N9P6 203 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 OTOSQ8NHW6 89 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 ITPR2Q14571 2701 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 TEX15Q9BXT5 2789 aa3.38□□□□□ -1.87
BRCA1-224ENST00000497488 CACNA1DQ01668 2161 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 INTS1Q8N201 2190 aaKnown RBP3.37□□□□□ -1.87
BRCA1-224ENST00000497488 IGLV10-54A0A075B6I4 117 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 A6NN06 94 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 PITX3O75364 302 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 MRPL33O75394 65 aaKnown RBP3.37□□□□□ -1.87
BRCA1-224ENST00000497488 ETV6P41212 452 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 KRTAP13-2Q52LG2 175 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 LINC01545Q5VT33 79 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 Q6ZUT4 128 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 OR5AK2Q8NH90 309 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 RAB37Q96AX2 223 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 CENPEQ02224 2701 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 MAST4O15021 2626 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 TACC2O95359 2948 aa3.37□□□□□ -1.87
BRCA1-224ENST00000497488 PKDREJQ9NTG1 2253 aa3.36□□□□□ -1.87
BRCA1-224ENST00000497488 M0R2P5 195 aa3.36□□□□□ -1.87
BRCA1-224ENST00000497488 ASAH2BP0C7U1 165 aa3.36□□□□□ -1.87
BRCA1-224ENST00000497488 NCMAPQ5T1S8 102 aa3.36□□□□□ -1.87
BRCA1-224ENST00000497488 CST11Q9H112 138 aa3.36□□□□□ -1.87
BRCA1-224ENST00000497488 POLQO75417 2590 aa3.35□□□□□ -1.87
BRCA1-224ENST00000497488 ABCA12Q86UK0 2595 aa3.35□□□□□ -1.87
BRCA1-224ENST00000497488 E7EUB6 86 aa3.35□□□□□ -1.87
BRCA1-224ENST00000497488 FNDC10F2Z333 226 aa3.35□□□□□ -1.87
BRCA1-224ENST00000497488 CCL25O15444 150 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms