RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 ZC2HC1BQ5TFG8 222 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 BOD1L2Q8IYS8 172 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 OR4C5Q8NGB2 326 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 OR11H2Q8NH07 326 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 BAALCQ8WXS3 180 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 KRTAP4-5Q9BYR2 181 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 MRPL35Q9NZE8 188 aaKnown RBP5.05□□□□□ -1.6
USP39-219ENST00000496047 DKK2Q9UBU2 259 aa5.05□□□□□ -1.6
USP39-219ENST00000496047 NSD1Q96L73 2696 aaPredicted RBP5.04□□□□□ -1.6
USP39-219ENST00000496047 VPS13CQ709C8 3753 aa5.04□□□□□ -1.6
USP39-219ENST00000496047 TRGV1A0A0A0MS02 117 aa5.04□□□□□ -1.6
USP39-219ENST00000496047 TRBV10-1A0A0K0K1A3 114 aa5.04□□□□□ -1.6
USP39-219ENST00000496047 IGHV3-53P01767 116 aa5.04□□□□□ -1.6
USP39-219ENST00000496047 CRYBA4P53673 196 aa5.04□□□□□ -1.6
USP39-219ENST00000496047 RPL36AP83881 106 aaKnown RBP5.04□□□□□ -1.6
USP39-219ENST00000496047 COTL1Q14019 142 aa5.04□□□□□ -1.6
USP39-219ENST00000496047 LINC00482Q8N8I6 264 aa5.04□□□□□ -1.6
USP39-219ENST00000496047 C11orf72Q8NBR9 251 aa5.04□□□□□ -1.6
USP39-219ENST00000496047 NEXN-AS1Q8NBZ9 246 aa5.04□□□□□ -1.6
USP39-219ENST00000496047 RPL36ALQ969Q0 106 aaKnown RBP5.04□□□□□ -1.6
USP39-219ENST00000496047 MRPL16Q9NX20 251 aaKnown RBP5.04□□□□□ -1.6
USP39-219ENST00000496047 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.04□□□□□ -1.6
USP39-219ENST00000496047 K7EQD1 137 aa5.03□□□□□ -1.6
USP39-219ENST00000496047 RPL35AP18077 110 aaKnown RBP5.03□□□□□ -1.6
USP39-219ENST00000496047 DAZ2Q13117 558 aaKnown RBP5.03□□□□□ -1.6
USP39-219ENST00000496047 CFAP126Q5VTH2 177 aa5.03□□□□□ -1.6
USP39-219ENST00000496047 HIST2H2BDQ6DRA6 164 aa5.03□□□□□ -1.6
USP39-219ENST00000496047 NEGR1Q7Z3B1 354 aa5.03□□□□□ -1.6
USP39-219ENST00000496047 STPG4Q8N801 248 aa5.03□□□□□ -1.6
USP39-219ENST00000496047 C20orf203Q8NBC4 194 aa5.03□□□□□ -1.6
USP39-219ENST00000496047 SPANXA1Q9NS26 97 aa5.03□□□□□ -1.6
USP39-219ENST00000496047 HIGD1BQ9P298 99 aa5.03□□□□□ -1.6
USP39-219ENST00000496047 TRGV2A0A075B6R0 118 aa5.02□□□□□ -1.61
USP39-219ENST00000496047 IGHV3-73A0A0B4J1V6 119 aa5.02□□□□□ -1.61
USP39-219ENST00000496047 PRSS29PA6NIE9 313 aa5.02□□□□□ -1.61
USP39-219ENST00000496047 APOC4P55056 127 aa5.02□□□□□ -1.61
USP39-219ENST00000496047 TAL2Q16559 108 aa5.02□□□□□ -1.61
USP39-219ENST00000496047 MPV17L2Q567V2 206 aa5.02□□□□□ -1.61
USP39-219ENST00000496047 C1orf158Q8N1D5 194 aa5.02□□□□□ -1.61
USP39-219ENST00000496047 IL17DQ8TAD2 202 aa5.02□□□□□ -1.61
USP39-219ENST00000496047 RNASE8Q8TDE3 154 aaKnown RBP5.02□□□□□ -1.61
USP39-219ENST00000496047 VCX2Q9H322 139 aa5.02□□□□□ -1.61
USP39-219ENST00000496047 ZMAT5Q9UDW3 170 aaKnown RBP5.02□□□□□ -1.61
USP39-219ENST00000496047 PYGO1Q9Y3Y4 419 aa5.02□□□□□ -1.61
USP39-219ENST00000496047 NBEAL2Q6ZNJ1 2754 aa5.02□□□□□ -1.61
USP39-219ENST00000496047 ZANQ9Y493 2812 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 TRAV8-6A0A0B4J262 113 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 SMIM9A6NGZ8 99 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 C11orf86A6NJI1 115 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 E9PLD3 99 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 TSHBP01222 138 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 BVES-AS1Q5T3Y7 98 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 TMEM170BQ5T4T1 132 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 DGAT2L7PQ6IED9 249 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 UFSP1Q6NVU6 142 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 DAZ4Q86SG3 579 aaKnown RBP5.01□□□□□ -1.61
USP39-219ENST00000496047 ORAOV1Q8WV07 137 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 PRADC1Q9BSG0 188 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 CHAC1Q9BUX1 264 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 KRTAP17-1Q9BYP8 105 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 DAZ3Q9NR90 486 aaKnown RBP5.01□□□□□ -1.61
USP39-219ENST00000496047 MXRA5Q9NR99 2828 aa5.01□□□□□ -1.61
USP39-219ENST00000496047 TRBV7-3A0A075B6L6 115 aa5□□□□□ -1.61
USP39-219ENST00000496047 TRGV4A0A0C4DH28 118 aa5□□□□□ -1.61
USP39-219ENST00000496047 IGIPA6NJ69 53 aa5□□□□□ -1.61
USP39-219ENST00000496047 UBE2L6O14933 153 aa5□□□□□ -1.61
USP39-219ENST00000496047 FGF6P10767 208 aa5□□□□□ -1.61
USP39-219ENST00000496047 ZNF25P17030 456 aaPredicted RBP5□□□□□ -1.61
USP39-219ENST00000496047 LGALS3P17931 250 aaKnown RBP5□□□□□ -1.61
USP39-219ENST00000496047 PTTG1IPP53801 180 aa5□□□□□ -1.61
USP39-219ENST00000496047 TCTAP57738 103 aa5□□□□□ -1.61
USP39-219ENST00000496047 RPL39P62891 51 aaKnown RBP5□□□□□ -1.61
USP39-219ENST00000496047 SCGB1D4Q6XE38 83 aa5□□□□□ -1.61
USP39-219ENST00000496047 C2orf91Q6ZV80 131 aa5□□□□□ -1.61
USP39-219ENST00000496047 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5□□□□□ -1.61
USP39-219ENST00000496047 CITED1Q99966 193 aa5□□□□□ -1.61
USP39-219ENST00000496047 CST9LQ9H4G1 147 aa5□□□□□ -1.61
USP39-219ENST00000496047 NOP10Q9NPE3 64 aaKnown RBP5□□□□□ -1.61
USP39-219ENST00000496047 PLA2G2DQ9UNK4 145 aa5□□□□□ -1.61
USP39-219ENST00000496047 HHLA3Q9XRX5 114 aa5□□□□□ -1.61
USP39-219ENST00000496047 MYMXA0A1B0GTQ4 84 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 ZNF815PA8K554 130 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 KRTAP9-7A8MTY7 169 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 GAGE1Q13065 139 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 NFE4Q86UQ8 179 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 PCP2Q8IVA1 136 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 ZNRF2Q8NHG8 242 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 KIR2DL5BQ8NHK3 375 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 PLEKHB2Q96CS7 222 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 TMEM101Q96IK0 257 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 OVOL2Q9BRP0 275 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 TIMM21Q9BVV7 248 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 WFDC10AQ9H1F0 79 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 COX11Q9Y6N1 276 aa4.99□□□□□ -1.61
USP39-219ENST00000496047 ZNF469Q96JG9 3925 aaPredicted RBP4.99□□□□□ -1.61
USP39-219ENST00000496047 MEGF8Q7Z7M0 2845 aa4.98□□□□□ -1.61
USP39-219ENST00000496047 IGLV4-3A0A075B6K6 122 aa4.98□□□□□ -1.61
USP39-219ENST00000496047 TRBV25-1A0A075B6N4 114 aa4.98□□□□□ -1.61
USP39-219ENST00000496047 TEX48A0A1B0GUV7 120 aa4.98□□□□□ -1.61
USP39-219ENST00000496047 TRBV6-4A0A1B0GX49 114 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms