RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 MYMXA0A1B0GTQ4 84 aa10.86□□□□□ -0.67
CHTOP-206ENST00000495554 PMVKQ15126 192 aa10.86□□□□□ -0.67
CHTOP-206ENST00000495554 PAPPA-AS1Q5QFB9 102 aa10.86□□□□□ -0.67
CHTOP-206ENST00000495554 RPL39P62891 51 aaKnown RBP10.86□□□□□ -0.67
CHTOP-206ENST00000495554 DYNLRB2Q8TF09 96 aa10.86□□□□□ -0.67
CHTOP-206ENST00000495554 DEFB104AQ8WTQ1 72 aa10.86□□□□□ -0.67
CHTOP-206ENST00000495554 SPAG8Q99932 426 aaPredicted RBP10.86□□□□□ -0.67
CHTOP-206ENST00000495554 RHOHQ15669 191 aa10.85□□□□□ -0.67
CHTOP-206ENST00000495554 SPANXB1Q9NS25 103 aaPredicted RBP10.85□□□□□ -0.67
CHTOP-206ENST00000495554 RS1O15537 224 aa10.84□□□□□ -0.67
CHTOP-206ENST00000495554 HTN1P15515 57 aa10.84□□□□□ -0.67
CHTOP-206ENST00000495554 NSUN5P1Q3KNT7 163 aa10.84□□□□□ -0.67
CHTOP-206ENST00000495554 PRADC1Q9BSG0 188 aa10.84□□□□□ -0.67
CHTOP-206ENST00000495554 RBMY1BA6NDE4 496 aaKnown RBP10.84□□□□□ -0.67
CHTOP-206ENST00000495554 RBMY1EA6NEQ0 496 aaKnown RBP10.84□□□□□ -0.67
CHTOP-206ENST00000495554 MT-ATP8P03928 68 aa10.84□□□□□ -0.67
CHTOP-206ENST00000495554 RBMY1DP0C7P1 496 aaKnown RBP10.84□□□□□ -0.67
CHTOP-206ENST00000495554 DEFB114Q30KQ6 69 aa10.84□□□□□ -0.67
CHTOP-206ENST00000495554 IGLV4-69A0A075B6H9 119 aa10.83□□□□□ -0.68
CHTOP-206ENST00000495554 A0A1W2PPM0 123 aa10.83□□□□□ -0.68
CHTOP-206ENST00000495554 TMEM126AQ9H061 195 aa10.83□□□□□ -0.68
CHTOP-206ENST00000495554 MAP6D1Q9H9H5 199 aa10.83□□□□□ -0.68
CHTOP-206ENST00000495554 MTORP42345 2549 aa10.83□□□□□ -0.68
CHTOP-206ENST00000495554 HIST1H4GQ99525 98 aa10.83□□□□□ -0.68
CHTOP-206ENST00000495554 EDA2RQ9HAV5 297 aa10.83□□□□□ -0.68
CHTOP-206ENST00000495554 C11orf86A6NJI1 115 aa10.82□□□□□ -0.68
CHTOP-206ENST00000495554 I3L3M4 83 aa10.82□□□□□ -0.68
CHTOP-206ENST00000495554 NHP2Q9NX24 153 aaKnown RBP10.82□□□□□ -0.68
CHTOP-206ENST00000495554 PIK3CD-AS1Q5SR53 167 aa10.82□□□□□ -0.68
CHTOP-206ENST00000495554 SAMD5Q5TGI4 173 aa10.82□□□□□ -0.68
CHTOP-206ENST00000495554 SPCS1Q9Y6A9 102 aa10.82□□□□□ -0.68
CHTOP-206ENST00000495554 HERVK_113P61574 105 aa10.81□□□□□ -0.68
CHTOP-206ENST00000495554 PHLDA1Q8WV24 401 aaPredicted RBP10.81□□□□□ -0.68
CHTOP-206ENST00000495554 CDIP1Q9H305 208 aa10.81□□□□□ -0.68
CHTOP-206ENST00000495554 A8MWV9 139 aa10.81□□□□□ -0.68
CHTOP-206ENST00000495554 M0R2P5 195 aa10.81□□□□□ -0.68
CHTOP-206ENST00000495554 FABP2P12104 132 aa10.81□□□□□ -0.68
CHTOP-206ENST00000495554 C11orf44Q8N8P7 122 aa10.81□□□□□ -0.68
CHTOP-206ENST00000495554 FASNP49327 2511 aaKnown RBP10.81□□□□□ -0.68
CHTOP-206ENST00000495554 GCN1Q92616 2671 aaKnown RBP10.8□□□□□ -0.68
CHTOP-206ENST00000495554 TRBV7-3A0A075B6L6 115 aa10.8□□□□□ -0.68
CHTOP-206ENST00000495554 ZNF415Q09FC8 603 aa10.8□□□□□ -0.68
CHTOP-206ENST00000495554 FAM19A5Q7Z5A7 132 aaPredicted RBP10.8□□□□□ -0.68
CHTOP-206ENST00000495554 C20orf203Q8NBC4 194 aa10.8□□□□□ -0.68
CHTOP-206ENST00000495554 SETD2Q9BYW2 2564 aaPredicted RBP10.8□□□□□ -0.68
CHTOP-206ENST00000495554 A0A1W2PRX2 142 aa10.8□□□□□ -0.68
CHTOP-206ENST00000495554 ZNF815PA8K554 130 aa10.8□□□□□ -0.68
CHTOP-206ENST00000495554 K7ERJ3 54 aa10.8□□□□□ -0.68
CHTOP-206ENST00000495554 P0DMU3 169 aa10.8□□□□□ -0.68
CHTOP-206ENST00000495554 FAM231AP0DMU4 169 aa10.8□□□□□ -0.68
CHTOP-206ENST00000495554 FAM231CP0DMU5 169 aa10.8□□□□□ -0.68
CHTOP-206ENST00000495554 EMP1P54849 157 aa10.8□□□□□ -0.68
CHTOP-206ENST00000495554 Q6ZUT4 128 aa10.8□□□□□ -0.68
CHTOP-206ENST00000495554 CD28P10747 220 aa10.79□□□□□ -0.68
CHTOP-206ENST00000495554 LINC00467Q9BRT7 94 aa10.79□□□□□ -0.68
CHTOP-206ENST00000495554 ZFAND6Q6FIF0 208 aa10.78□□□□□ -0.68
CHTOP-206ENST00000495554 LINC01006Q8NI28 216 aa10.78□□□□□ -0.68
CHTOP-206ENST00000495554 LINC01587Q99440 93 aa10.78□□□□□ -0.68
CHTOP-206ENST00000495554 WNK1Q9H4A3 2382 aa10.78□□□□□ -0.68
CHTOP-206ENST00000495554 FHL3Q13643 280 aa10.78□□□□□ -0.68
CHTOP-206ENST00000495554 SCGB1D4Q6XE38 83 aa10.78□□□□□ -0.68
CHTOP-206ENST00000495554 IGHV3-73A0A0B4J1V6 119 aa10.77□□□□□ -0.68
CHTOP-206ENST00000495554 INSP01308 110 aa10.77□□□□□ -0.68
CHTOP-206ENST00000495554 PRM2P04554 102 aa10.77□□□□□ -0.68
CHTOP-206ENST00000495554 XGP55808 180 aa10.77□□□□□ -0.68
CHTOP-206ENST00000495554 C12orf74Q32Q52 190 aa10.77□□□□□ -0.68
CHTOP-206ENST00000495554 TMEM170BQ5T4T1 132 aa10.77□□□□□ -0.68
CHTOP-206ENST00000495554 ZNRF2Q8NHG8 242 aa10.77□□□□□ -0.68
CHTOP-206ENST00000495554 RNASE1P07998 156 aaKnown RBP10.77□□□□□ -0.69
CHTOP-206ENST00000495554 NFE4Q86UQ8 179 aa10.77□□□□□ -0.69
CHTOP-206ENST00000495554 OR13C6PQ8NH95 151 aa10.77□□□□□ -0.69
CHTOP-206ENST00000495554 C16orf95Q9H693 158 aa10.76□□□□□ -0.69
CHTOP-206ENST00000495554 HECTD1Q9ULT8 2610 aa10.76□□□□□ -0.69
CHTOP-206ENST00000495554 CCL24O00175 119 aa10.76□□□□□ -0.69
CHTOP-206ENST00000495554 PROK1P58294 105 aa10.76□□□□□ -0.69
CHTOP-206ENST00000495554 C11orf72Q8NBR9 251 aa10.76□□□□□ -0.69
CHTOP-206ENST00000495554 OPRPNQ99935 248 aaPredicted RBP10.76□□□□□ -0.69
CHTOP-206ENST00000495554 SMR3AQ99954 134 aa10.76□□□□□ -0.69
CHTOP-206ENST00000495554 LOC107984640A0A0U1RRK4 108 aa10.75□□□□□ -0.69
CHTOP-206ENST00000495554 A0A1B0GWB2 263 aa10.75□□□□□ -0.69
CHTOP-206ENST00000495554 IGLL5B9A064 214 aa10.75□□□□□ -0.69
CHTOP-206ENST00000495554 ODF3L2Q3SX64 289 aa10.75□□□□□ -0.69
CHTOP-206ENST00000495554 CFAP126Q5VTH2 177 aa10.75□□□□□ -0.69
CHTOP-206ENST00000495554 RHODO00212 210 aa10.74□□□□□ -0.69
CHTOP-206ENST00000495554 PLEKHB2Q96CS7 222 aa10.74□□□□□ -0.69
CHTOP-206ENST00000495554 PYGO1Q9Y3Y4 419 aa10.74□□□□□ -0.69
CHTOP-206ENST00000495554 IGLV4-3A0A075B6K6 122 aa10.73□□□□□ -0.69
CHTOP-206ENST00000495554 NDUFV3P56181 108 aaKnown RBP10.73□□□□□ -0.69
CHTOP-206ENST00000495554 SRSF9Q13242 221 aaKnown RBP eCLIP10.73□□□□□ -0.691e-7■□□□□ 8.6
CHTOP-206ENST00000495554 BEAN1Q3B7T3 259 aa10.73□□□□□ -0.69
CHTOP-206ENST00000495554 STHQ8IWL8 128 aa10.73□□□□□ -0.69
CHTOP-206ENST00000495554 NIPBLQ6KC79 2804 aaeCLIP10.73□□□□□ -0.69
CHTOP-206ENST00000495554 LINC00694P0DN24 101 aa10.73□□□□□ -0.69
CHTOP-206ENST00000495554 MEIG1Q5JSS6 88 aa10.72□□□□□ -0.69
CHTOP-206ENST00000495554 C1orf43Q9BWL3 253 aa10.72□□□□□ -0.69
CHTOP-206ENST00000495554 A0A0J9YY99 117 aa10.72□□□□□ -0.69
CHTOP-206ENST00000495554 F8W1H4 67 aa10.72□□□□□ -0.69
CHTOP-206ENST00000495554 Q6ZSN1 163 aa10.72□□□□□ -0.69
CHTOP-206ENST00000495554 XCL2Q9UBD3 114 aa10.72□□□□□ -0.69
CHTOP-206ENST00000495554 J3QQQ9 107 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms