RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 LRCOL1A6NCL2 159 aa5.84□□□□□ -1.47
ITGB1-217ENST00000494395 GAS8-AS1O95177 125 aa5.84□□□□□ -1.47
ITGB1-217ENST00000494395 FOXI1Q12951 378 aa5.84□□□□□ -1.47
ITGB1-217ENST00000494395 TMEM97Q5BJF2 176 aa5.84□□□□□ -1.47
ITGB1-217ENST00000494395 FRZBQ92765 325 aa5.84□□□□□ -1.47
ITGB1-217ENST00000494395 RPL39LQ96EH5 51 aaKnown RBP5.84□□□□□ -1.47
ITGB1-217ENST00000494395 TMEM191AQ9H0A3 160 aa5.84□□□□□ -1.47
ITGB1-217ENST00000494395 Q9HAA7 133 aa5.84□□□□□ -1.47
ITGB1-217ENST00000494395 A0A087WTM6 91 aa5.83□□□□□ -1.48
ITGB1-217ENST00000494395 TRBV6-5A0A0K0K1A5 114 aa5.83□□□□□ -1.48
ITGB1-217ENST00000494395 MPV17L2Q567V2 206 aa5.83□□□□□ -1.48
ITGB1-217ENST00000494395 ATRAIDQ6UW56 229 aa5.83□□□□□ -1.48
ITGB1-217ENST00000494395 SMIM15Q7Z3B0 74 aa5.83□□□□□ -1.48
ITGB1-217ENST00000494395 SPATA12Q7Z6I5 190 aa5.83□□□□□ -1.48
ITGB1-217ENST00000494395 BORCS7Q96B45 105 aa5.83□□□□□ -1.48
ITGB1-217ENST00000494395 NAT8BQ9UHF3 227 aa5.83□□□□□ -1.48
ITGB1-217ENST00000494395 TRBV25-1A0A075B6N4 114 aa5.82□□□□□ -1.48
ITGB1-217ENST00000494395 TRAV8-3A0A0A6YYJ7 113 aa5.82□□□□□ -1.48
ITGB1-217ENST00000494395 IGHV1-24A0A0C4DH33 117 aa5.82□□□□□ -1.48
ITGB1-217ENST00000494395 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
ITGB1-217ENST00000494395 A0A1B0GXF2 115 aa5.82□□□□□ -1.48
ITGB1-217ENST00000494395 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-217ENST00000494395 NPSP0C0P6 89 aa5.82□□□□□ -1.48
ITGB1-217ENST00000494395 ADCYAP1P18509 176 aa5.82□□□□□ -1.48
ITGB1-217ENST00000494395 RAB4AP20338 218 aa5.82□□□□□ -1.48
ITGB1-217ENST00000494395 PNRC1Q12796 327 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-217ENST00000494395 RIGQ13278 110 aa5.82□□□□□ -1.48
ITGB1-217ENST00000494395 AMN1Q8IY45 258 aa5.82□□□□□ -1.48
ITGB1-217ENST00000494395 MAPKAPK5-AS1Q8N8E1 139 aa5.82□□□□□ -1.48
ITGB1-217ENST00000494395 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.82□□□□□ -1.48
ITGB1-217ENST00000494395 KLK12Q9UKR0 248 aa5.82□□□□□ -1.48
ITGB1-217ENST00000494395 A0A087WX48 190 aa5.81□□□□□ -1.48
ITGB1-217ENST00000494395 C16orf90A8MZG2 172 aa5.81□□□□□ -1.48
ITGB1-217ENST00000494395 RPS10P46783 165 aaKnown RBP5.81□□□□□ -1.48
ITGB1-217ENST00000494395 PKIAP61925 76 aa5.81□□□□□ -1.48
ITGB1-217ENST00000494395 WFDC2Q14508 124 aa5.81□□□□□ -1.48
ITGB1-217ENST00000494395 DGAT2L7PQ6IED9 249 aa5.81□□□□□ -1.48
ITGB1-217ENST00000494395 UQCC3Q6UW78 93 aa5.81□□□□□ -1.48
ITGB1-217ENST00000494395 ENHOQ6UWT2 76 aa5.81□□□□□ -1.48
ITGB1-217ENST00000494395 MRAP2Q96G30 205 aa5.81□□□□□ -1.48
ITGB1-217ENST00000494395 CHCHD5Q9BSY4 110 aa5.81□□□□□ -1.48
ITGB1-217ENST00000494395 PRR34Q9NV39 138 aa5.81□□□□□ -1.48
ITGB1-217ENST00000494395 URGCP-MRPS24S4R325 110 aa5.81□□□□□ -1.48
ITGB1-217ENST00000494395 LRP1BQ9NZR2 4599 aa5.81□□□□□ -1.48
ITGB1-217ENST00000494395 DNAH5Q8TE73 4624 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 SDHAF1A6NFY7 115 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 PPP1R2P9O14990 202 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 FUSP35637 526 aaKnown RBP eCLIP5.8□□□□□ -1.482e-6■□□□□ 8.2
ITGB1-217ENST00000494395 POLR2KP53803 58 aaKnown RBP5.8□□□□□ -1.48
ITGB1-217ENST00000494395 RBX1P62877 108 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 COTL1Q14019 142 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 ELOBQ15370 118 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 FAM104BQ5XKR9 115 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 KCNIP4Q6PIL6 250 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 NRACQ8N912 160 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 Q8N976 141 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 C20orf203Q8NBC4 194 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 DEFB104AQ8WTQ1 72 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 TMEM243Q9BU79 118 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 KIAA1109Q2LD37 5005 aa5.8□□□□□ -1.48
ITGB1-217ENST00000494395 IGLV4-60A0A075B6I1 120 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 A0A1B0GUV1 79 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 A0A1B0GW15 77 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 TMEM218A2RU14 115 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 LINC00862A6NCI5 91 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 TMEM262E9PQX1 116 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 PSCAO43653 123 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 NCR2O95944 276 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 ANGP03950 147 aaKnown RBP5.79□□□□□ -1.48
ITGB1-217ENST00000494395 GAGE6Q13070 117 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 MRPL51Q4U2R6 128 aaKnown RBP5.79□□□□□ -1.48
ITGB1-217ENST00000494395 KRTAP26-1Q6PEX3 210 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 UBE2WQ96B02 151 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 TMEM70Q9BUB7 260 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 TM2D2Q9BX73 214 aa5.79□□□□□ -1.48
ITGB1-217ENST00000494395 TRBV27A0A0K0K1C4 114 aa5.78□□□□□ -1.48
ITGB1-217ENST00000494395 SMKR1H3BMG3 65 aa5.78□□□□□ -1.48
ITGB1-217ENST00000494395 TSHBP01222 138 aa5.78□□□□□ -1.48
ITGB1-217ENST00000494395 ESDP10768 282 aa5.78□□□□□ -1.48
ITGB1-217ENST00000494395 AMTP48728 403 aa5.78□□□□□ -1.48
ITGB1-217ENST00000494395 HBBP68871 147 aa5.78□□□□□ -1.48
ITGB1-217ENST00000494395 Q0VG73 95 aa5.78□□□□□ -1.48
ITGB1-217ENST00000494395 MRPL54Q6P161 138 aaKnown RBP5.78□□□□□ -1.48
ITGB1-217ENST00000494395 ATP5L2Q7Z4Y8 100 aa5.78□□□□□ -1.48
ITGB1-217ENST00000494395 Q8N814 137 aa5.78□□□□□ -1.48
ITGB1-217ENST00000494395 COX11Q9Y6N1 276 aa5.78□□□□□ -1.48
ITGB1-217ENST00000494395 HERC2O95714 4834 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 HSPG2P98160 4391 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 TRBV24-1A0A075B6N3 115 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 IGKV2D-24A0A075B6R9 120 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 MT-ND4LP03901 98 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 CAMPP49913 170 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 MIAQ16674 131 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 C10orf91Q5T1B1 145 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 LCE4AQ5TA78 99 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 COMMD7Q86VX2 200 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 RMI2Q96E14 147 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 SEC11CQ9BY50 192 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 KRTAP17-1Q9BYP8 105 aa5.77□□□□□ -1.49
ITGB1-217ENST00000494395 ST20Q9HBF5 79 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms