RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 LINC00299Q6ZSB3 139 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 DEFB124Q8NES8 71 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 OR4B1Q8NGF8 309 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 OR4C12Q96R67 309 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 EFCAB11Q9BUY7 163 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 NUBP2Q9Y5Y2 271 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 IQGAP3Q86VI3 1631 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 ANKRD50Q9ULJ7 1429 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 UNC13CQ8NB66 2214 aa0.37□□□□□ -2.35
ITGB1-216ENST00000493758 MYO18AQ92614 2054 aaKnown RBP0.36□□□□□ -2.35
ITGB1-216ENST00000493758 ANKRD36BQ8N2N9 1353 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 NUP210LQ5VU65 1888 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 TRBV30A0A0K0K1B3 111 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 MAP1LC3B2A6NCE7 125 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 NUPR2A6NF83 97 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 IGHV3-33P01772 117 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 CD14P08571 375 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 FREM3P0C091 2139 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 NEFHP12036 1026 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 FABP2P12104 132 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 FABP4P15090 132 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 G0S2P27469 103 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 CRYBA4P53673 196 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 NDUFA6P56556 154 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 OCIAD2Q56VL3 154 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 PPP1R2P3Q6NXS1 205 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 GLIPR1L1Q6UWM5 242 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 FOXI2Q6ZQN5 318 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 PRR15Q8IV56 129 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 OR5H6Q8NGV6 325 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 OR5AK2Q8NH90 309 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 GRPEL2Q8TAA5 225 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 NIT2Q9NQR4 276 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 OTORQ9NRC9 128 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 NAT8BQ9UHF3 227 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 LAMTOR2Q9Y2Q5 125 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 PARP14Q460N5 1801 aa0.36□□□□□ -2.35
ITGB1-216ENST00000493758 CPDO75976 1380 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 PTPRFP10586 1907 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 TRDV1A0A1B0GX56 115 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 ZNF727A8MUV8 499 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 TRACP01848 142 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 BCL2P10415 239 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 GNG10P50151 68 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 FXYD6P3P58550 94 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 FXYD4P59646 89 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 KRTAP19-6Q3LI70 58 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 CASC2Q6XLA1 102 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 Q6ZQY7 126 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 STX12Q86Y82 276 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 AP1S3Q96PC3 154 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 CCDC32Q9BV29 185 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 PCBD2Q9H0N5 130 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 LRTM1Q9HBL6 345 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 IL20Q9NYY1 176 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 ATPIF1Q9UII2 106 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 ZNF236Q9UL36 1845 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 CPSF1Q10570 1443 aaKnown RBP0.35□□□□□ -2.35
ITGB1-216ENST00000493758 NAIPQ13075 1403 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 CCDC141Q6ZP82 1450 aa0.35□□□□□ -2.35
ITGB1-216ENST00000493758 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.35
ITGB1-216ENST00000493758 C3orf85A0A1B0GTC6 90 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 E7EQ34 232 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 GABARAPH6UMI1 98 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 FAM107AO95990 144 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 TPT1P13693 172 aaKnown RBP0.34□□□□□ -2.36
ITGB1-216ENST00000493758 KDELR1P24390 212 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 S100A11P31949 105 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 SDC2P34741 201 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 FOXA3P55318 350 aaPredicted RBP0.34□□□□□ -2.36
ITGB1-216ENST00000493758 RPL37AP61513 92 aaKnown RBP0.34□□□□□ -2.36
ITGB1-216ENST00000493758 NEDD8Q15843 81 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 ZCCHC23Q6ZST2 131 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 Q86TA4 180 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 ANGPTL5Q86XS5 388 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 LINC00269Q8N2A0 174 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 C5orf17Q8NAS9 161 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 DIRC1Q969H9 104 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 CARD19Q96LW7 228 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 PRELID3AQ96N28 172 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 LIMD2Q9BT23 127 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 V9GYQ6 96 aa0.34□□□□□ -2.36
ITGB1-216ENST00000493758 ANKRD30AQ9BXX3 1397 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 EDC4Q6P2E9 1401 aaKnown RBP0.33□□□□□ -2.36
ITGB1-216ENST00000493758 RGPD2P0DJD1 1756 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 A0A0J9YY99 117 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 BBIP1A8MTZ0 92 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 SULT1C4O75897 302 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 PDE6GP18545 87 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 SPINT3P49223 89 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 ZNF137PP52743 207 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 MAXP61244 160 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 TMEM78Q5T7P6 136 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 Q6ZS92 163 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 LINC00305Q7Z4B0 112 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 ATOH7Q8N100 152 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 C10orf111Q8N326 155 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 CCL4L1Q8NHW4 92 aa0.33□□□□□ -2.36
ITGB1-216ENST00000493758 RMND5BQ96G75 393 aaPredicted RBP0.33□□□□□ -2.36
ITGB1-216ENST00000493758 CIB3Q96Q77 187 aaPredicted RBP0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms