RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 IGHV1-58A0A0C4DH39 117 aa4.05□□□□□ -1.76
PDLIM1-203ENST00000490391 IGKV3OR2-268A0A0C4DH90 116 aa4.05□□□□□ -1.76
PDLIM1-203ENST00000490391 FABP5P3A8MUU1 101 aa4.05□□□□□ -1.76
PDLIM1-203ENST00000490391 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.05□□□□□ -1.76
PDLIM1-203ENST00000490391 M0R036 132 aa4.05□□□□□ -1.76
PDLIM1-203ENST00000490391 TPT1P13693 172 aaKnown RBP4.05□□□□□ -1.76
PDLIM1-203ENST00000490391 TMBIM6P55061 237 aa4.05□□□□□ -1.76
PDLIM1-203ENST00000490391 MEF2BQ02080 365 aaPredicted RBP4.05□□□□□ -1.76
PDLIM1-203ENST00000490391 NHLH2Q02577 135 aa4.05□□□□□ -1.76
PDLIM1-203ENST00000490391 TYMSOSQ8TAI1 123 aa4.05□□□□□ -1.76
PDLIM1-203ENST00000490391 KCNIP2Q9NS61 270 aa4.05□□□□□ -1.76
PDLIM1-203ENST00000490391 FAM168BA1KXE4 195 aa4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 APOMO95445 188 aa4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 TAS2R45P59539 299 aa4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 RAB32Q13637 225 aa4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 KRTAP13-3Q3SY46 172 aa4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 KRTAP13-2Q52LG2 175 aa4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 SAPCD1Q5SSQ6 148 aa4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 KRTAP7-1Q8IUC3 87 aa4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 NUP35Q8NFH5 326 aa4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 ZNF471Q9BX82 626 aaPredicted RBP4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 WDR61Q9GZS3 305 aaKnown RBP4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 MED28Q9H204 178 aa4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 FLVCR2Q9UPI3 526 aa4.04□□□□□ -1.76
PDLIM1-203ENST00000490391 K7EQM0 130 aa4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 ZNF861PO60384 105 aa4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 CAMPP49913 170 aa4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 AP3S2P59780 193 aa4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 SEC61BP60468 96 aaKnown RBP4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 IL15RAQ13261 267 aa4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 PQLC2Q6ZP29 291 aa4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 TOMM5Q8N4H5 51 aa4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 OR10AG1Q8NH19 301 aa4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 TSKUQ8WUA8 353 aa4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 MRPS26Q9BYN8 205 aaKnown RBP4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 Q9H521 79 aa4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 VCX3AQ9NNX9 186 aa4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 ARL2-SNX15V9GYD0 113 aa4.03□□□□□ -1.76
PDLIM1-203ENST00000490391 A0A087WXM4 84 aa4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 TMSB15BA0A087X1C1 80 aa4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 M0QY20 66 aa4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 SH2D1AO60880 128 aa4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 NDUFB6O95139 128 aa4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 TSHBP01222 138 aa4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 PVALBP20472 110 aaPredicted RBP4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 RPL12P30050 165 aaKnown RBP4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 XCL1P47992 114 aa4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 RPL18AQ02543 176 aaKnown RBP4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 COX8CQ7Z4L0 72 aa4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 LINC00304Q8N9R0 145 aa4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 DEDD2Q8WXF8 326 aa4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 EPDR1Q9UM22 224 aa4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
PDLIM1-203ENST00000490391 IGLV4-69A0A075B6H9 119 aa4.01□□□□□ -1.77
PDLIM1-203ENST00000490391 TRAV34A0A0B4J273 112 aa4.01□□□□□ -1.77
PDLIM1-203ENST00000490391 F5H697 171 aa4.01□□□□□ -1.77
PDLIM1-203ENST00000490391 EIF5AL1Q6IS14 154 aaKnown RBP4.01□□□□□ -1.77
PDLIM1-203ENST00000490391 OR5A1Q8NGJ0 315 aa4.01□□□□□ -1.77
PDLIM1-203ENST00000490391 ISOC2Q96AB3 205 aa4.01□□□□□ -1.77
PDLIM1-203ENST00000490391 PGLYRP4Q96LB8 373 aa4.01□□□□□ -1.77
PDLIM1-203ENST00000490391 C17orf112F2Z3M2 114 aa4□□□□□ -1.77
PDLIM1-203ENST00000490391 UBE2L6O14933 153 aa4□□□□□ -1.77
PDLIM1-203ENST00000490391 HMGB3O15347 200 aaKnown RBP4□□□□□ -1.77
PDLIM1-203ENST00000490391 CCL25O15444 150 aa4□□□□□ -1.77
PDLIM1-203ENST00000490391 ARL14EPLP0DKL9 152 aa4□□□□□ -1.77
PDLIM1-203ENST00000490391 Q86TA4 180 aa4□□□□□ -1.77
PDLIM1-203ENST00000490391 OPRPNQ99935 248 aaPredicted RBP4□□□□□ -1.77
PDLIM1-203ENST00000490391 RBM38Q9H0Z9 239 aaKnown RBP4□□□□□ -1.77
PDLIM1-203ENST00000490391 FAM25EA8MYX2 175 aa3.99□□□□□ -1.77
PDLIM1-203ENST00000490391 SNAI2O43623 268 aa3.99□□□□□ -1.77
PDLIM1-203ENST00000490391 NKX2-5P52952 324 aaPredicted RBP3.99□□□□□ -1.77
PDLIM1-203ENST00000490391 CTAG1AP78358 180 aa3.99□□□□□ -1.77
PDLIM1-203ENST00000490391 LINC00242Q5T6M2 205 aa3.99□□□□□ -1.77
PDLIM1-203ENST00000490391 FAM19A5Q7Z5A7 132 aaPredicted RBP3.99□□□□□ -1.77
PDLIM1-203ENST00000490391 LINC00337Q8N6G1 96 aa3.99□□□□□ -1.77
PDLIM1-203ENST00000490391 ANAPC11Q9NYG5 84 aa3.99□□□□□ -1.77
PDLIM1-203ENST00000490391 MUC21A0A140T8X8 626 aa3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 LINC00959A0A1B0GUT2 108 aa3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 H3BMQ9 156 aa3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 BCL2L11O43521 198 aa3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 STAG3L2P0CL84 134 aa3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 STAG3L3P0CL85 134 aa3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 BTCP35070 178 aa3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 SUMO4Q6EEV6 95 aa3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 FP248Q71RG6 208 aaPredicted RBP3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 C2orf48Q96LS8 159 aa3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 CAMK2N2Q96S95 79 aa3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 WFDC1Q9HC57 220 aa3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 V9GYH0 126 aa3.98□□□□□ -1.77
PDLIM1-203ENST00000490391 C19orf71A6NCJ1 209 aa3.97□□□□□ -1.77
PDLIM1-203ENST00000490391 M0QXV9 152 aa3.97□□□□□ -1.77
PDLIM1-203ENST00000490391 ESDP10768 282 aa3.97□□□□□ -1.77
PDLIM1-203ENST00000490391 GCHFRP30047 84 aa3.97□□□□□ -1.77
PDLIM1-203ENST00000490391 DEFA3P59666 94 aa3.97□□□□□ -1.77
PDLIM1-203ENST00000490391 UBE2BP63146 152 aa3.97□□□□□ -1.77
PDLIM1-203ENST00000490391 CD164L2Q6UWJ8 174 aa3.97□□□□□ -1.77
PDLIM1-203ENST00000490391 A0A1W2PPV4 95 aa3.96□□□□□ -1.78
PDLIM1-203ENST00000490391 KRTAP4-16G5E9R7 235 aaPredicted RBP3.96□□□□□ -1.78
PDLIM1-203ENST00000490391 CXCL1P09341 107 aa3.96□□□□□ -1.78
PDLIM1-203ENST00000490391 OR5AL1P0C617 328 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms