RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CBY3A6NI87 242 aa13.78□□□□□ -0.2
CCM2-216ENST00000488727 PLNP26678 52 aa13.78□□□□□ -0.2
CCM2-216ENST00000488727 C2orf66Q6UXQ4 117 aa13.78□□□□□ -0.2
CCM2-216ENST00000488727 CRYGDP07320 174 aa13.78□□□□□ -0.2
CCM2-216ENST00000488727 C11orf72Q8NBR9 251 aa13.78□□□□□ -0.2
CCM2-216ENST00000488727 F8VRH5 84 aa13.77□□□□□ -0.21
CCM2-216ENST00000488727 H7C1H1 209 aa13.77□□□□□ -0.21
CCM2-216ENST00000488727 VCYO14598 125 aa13.77□□□□□ -0.21
CCM2-216ENST00000488727 NMUP48645 174 aa13.77□□□□□ -0.21
CCM2-216ENST00000488727 NEXN-AS1Q8NBZ9 246 aa13.77□□□□□ -0.21
CCM2-216ENST00000488727 TMEM97Q5BJF2 176 aa13.76□□□□□ -0.21
CCM2-216ENST00000488727 ERASQ7Z444 233 aa13.76□□□□□ -0.21
CCM2-216ENST00000488727 TRBV27A0A0K0K1C4 114 aa13.76□□□□□ -0.21
CCM2-216ENST00000488727 SEC11AP67812 179 aa13.76□□□□□ -0.21
CCM2-216ENST00000488727 HSD52Q0P140 79 aa13.76□□□□□ -0.21
CCM2-216ENST00000488727 ZC2HC1BQ5TFG8 222 aa13.76□□□□□ -0.21
CCM2-216ENST00000488727 FAM222AQ5U5X8 452 aa13.76□□□□□ -0.21
CCM2-216ENST00000488727 PCP2Q8IVA1 136 aa13.76□□□□□ -0.21
CCM2-216ENST00000488727 IL17DQ8TAD2 202 aa13.76□□□□□ -0.21
CCM2-216ENST00000488727 WWC2-AS2Q96NR7 200 aa13.76□□□□□ -0.21
CCM2-216ENST00000488727 F5H697 171 aa13.75□□□□□ -0.21
CCM2-216ENST00000488727 PIK3CD-AS1Q5SR53 167 aa13.75□□□□□ -0.21
CCM2-216ENST00000488727 HIGD1BQ9P298 99 aa13.75□□□□□ -0.21
CCM2-216ENST00000488727 CYSLTR1Q9Y271 337 aa13.75□□□□□ -0.21
CCM2-216ENST00000488727 IGKV2D-26A0A0A0MRZ7 120 aa13.74□□□□□ -0.21
CCM2-216ENST00000488727 M0QY20 66 aa13.74□□□□□ -0.21
CCM2-216ENST00000488727 ZNF56Q15929 161 aa13.74□□□□□ -0.21
CCM2-216ENST00000488727 ZFP2Q6ZN57 461 aa13.74□□□□□ -0.21
CCM2-216ENST00000488727 BAALCQ8WXS3 180 aa13.74□□□□□ -0.21
CCM2-216ENST00000488727 PTH2Q96A98 100 aa13.74□□□□□ -0.21
CCM2-216ENST00000488727 KIR2DL4Q99706 377 aa13.74□□□□□ -0.21
CCM2-216ENST00000488727 SDHAF1A6NFY7 115 aa13.73□□□□□ -0.21
CCM2-216ENST00000488727 TAX1BP3O14907 124 aa13.73□□□□□ -0.21
CCM2-216ENST00000488727 NANOS2P60321 138 aaKnown RBP13.73□□□□□ -0.21
CCM2-216ENST00000488727 ZNF876PQ49A33 203 aa13.73□□□□□ -0.21
CCM2-216ENST00000488727 FAM74A4Q5TZK3 123 aa13.73□□□□□ -0.21
CCM2-216ENST00000488727 C11orf45Q8TAV5 145 aa13.73□□□□□ -0.21
CCM2-216ENST00000488727 NOP10Q9NPE3 64 aaKnown RBP13.73□□□□□ -0.21
CCM2-216ENST00000488727 CHTOPQ9Y3Y2 248 aaKnown RBP13.73□□□□□ -0.21
CCM2-216ENST00000488727 NPSP0C0P6 89 aa13.72□□□□□ -0.21
CCM2-216ENST00000488727 SPART-AS1P0CW21 52 aa13.72□□□□□ -0.21
CCM2-216ENST00000488727 TCTAP57738 103 aa13.72□□□□□ -0.21
CCM2-216ENST00000488727 NEGR1Q7Z3B1 354 aa13.72□□□□□ -0.21
CCM2-216ENST00000488727 ZNF415Q09FC8 603 aa13.71□□□□□ -0.21
CCM2-216ENST00000488727 DAZ2Q13117 558 aaKnown RBP13.71□□□□□ -0.21
CCM2-216ENST00000488727 RHOHQ15669 191 aa13.71□□□□□ -0.21
CCM2-216ENST00000488727 DNAH7Q8WXX0 4024 aa13.7□□□□□ -0.22
CCM2-216ENST00000488727 LYRM9A8MSI8 78 aa13.7□□□□□ -0.22
CCM2-216ENST00000488727 C12orf74Q32Q52 190 aa13.7□□□□□ -0.22
CCM2-216ENST00000488727 TMEM141Q96I45 108 aa13.7□□□□□ -0.22
CCM2-216ENST00000488727 TIMM17AQ99595 171 aa13.7□□□□□ -0.22
CCM2-216ENST00000488727 IGIPA6NJ69 53 aa13.7□□□□□ -0.22
CCM2-216ENST00000488727 Q6ZVH6 145 aa13.7□□□□□ -0.22
CCM2-216ENST00000488727 TEX48A0A1B0GUV7 120 aa13.69□□□□□ -0.22
CCM2-216ENST00000488727 PRSS29PA6NIE9 313 aa13.68□□□□□ -0.22
CCM2-216ENST00000488727 M0R2P5 195 aa13.68□□□□□ -0.22
CCM2-216ENST00000488727 Q6ZTC4 211 aa13.68□□□□□ -0.22
CCM2-216ENST00000488727 Q6ZTI0 123 aa13.68□□□□□ -0.22
CCM2-216ENST00000488727 LINC00612Q8N6U2 182 aa13.68□□□□□ -0.22
CCM2-216ENST00000488727 A8MWV9 139 aa13.67□□□□□ -0.22
CCM2-216ENST00000488727 DEFB130BP0DP73 79 aa13.67□□□□□ -0.22
CCM2-216ENST00000488727 DEFB130AP0DP74 79 aa13.67□□□□□ -0.22
CCM2-216ENST00000488727 MUC7Q8TAX7 377 aa13.67□□□□□ -0.22
CCM2-216ENST00000488727 A6NDN8 102 aa13.67□□□□□ -0.22
CCM2-216ENST00000488727 TSHBP01222 138 aa13.67□□□□□ -0.22
CCM2-216ENST00000488727 UFSP1Q6NVU6 142 aa13.67□□□□□ -0.22
CCM2-216ENST00000488727 NACAE9PAV3 2078 aa13.66□□□□□ -0.22
CCM2-216ENST00000488727 DAD1P61803 113 aa13.66□□□□□ -0.22
CCM2-216ENST00000488727 UBE2V1Q13404 147 aa13.66□□□□□ -0.22
CCM2-216ENST00000488727 SPXQ9BT56 116 aa13.66□□□□□ -0.22
CCM2-216ENST00000488727 MRPL16Q9NX20 251 aaKnown RBP13.66□□□□□ -0.22
CCM2-216ENST00000488727 TRBV25-1A0A075B6N4 114 aa13.65□□□□□ -0.22
CCM2-216ENST00000488727 TRGV1A0A0A0MS02 117 aa13.65□□□□□ -0.22
CCM2-216ENST00000488727 GAGE12BA1L429 117 aa13.65□□□□□ -0.22
CCM2-216ENST00000488727 GAGE7O76087 117 aa13.65□□□□□ -0.22
CCM2-216ENST00000488727 GAGE12FP0CL80 117 aa13.65□□□□□ -0.22
CCM2-216ENST00000488727 GAGE12GP0CL81 117 aa13.65□□□□□ -0.22
CCM2-216ENST00000488727 GAGE12IP0CL82 117 aa13.65□□□□□ -0.22
CCM2-216ENST00000488727 PAPPA-AS1Q5QFB9 102 aa13.65□□□□□ -0.22
CCM2-216ENST00000488727 CHAC1Q9BUX1 264 aa13.65□□□□□ -0.22
CCM2-216ENST00000488727 CSMD3Q7Z407 3707 aa13.65□□□□□ -0.22
CCM2-216ENST00000488727 I3L3M4 83 aa13.64□□□□□ -0.23
CCM2-216ENST00000488727 PMVKQ15126 192 aa13.64□□□□□ -0.23
CCM2-216ENST00000488727 TTTY13Q9BZ97 58 aa13.64□□□□□ -0.23
CCM2-216ENST00000488727 E9PLD3 99 aa13.63□□□□□ -0.23
CCM2-216ENST00000488727 H3BRM9 83 aa13.63□□□□□ -0.23
CCM2-216ENST00000488727 RPL39P62891 51 aaKnown RBP13.63□□□□□ -0.23
CCM2-216ENST00000488727 ZFAND6Q6FIF0 208 aa13.63□□□□□ -0.23
CCM2-216ENST00000488727 IGLV4-69A0A075B6H9 119 aa13.62□□□□□ -0.23
CCM2-216ENST00000488727 RHODO00212 210 aa13.62□□□□□ -0.23
CCM2-216ENST00000488727 TAL2Q16559 108 aa13.62□□□□□ -0.23
CCM2-216ENST00000488727 MAPKAPK5-AS1Q8N8E1 139 aa13.62□□□□□ -0.23
CCM2-216ENST00000488727 PHLDA1Q8WV24 401 aaPredicted RBP13.62□□□□□ -0.23
CCM2-216ENST00000488727 CST9LQ9H4G1 147 aa13.61□□□□□ -0.23
CCM2-216ENST00000488727 CCL25O15444 150 aa13.61□□□□□ -0.23
CCM2-216ENST00000488727 P0DMU3 169 aa13.61□□□□□ -0.23
CCM2-216ENST00000488727 FAM231AP0DMU4 169 aa13.61□□□□□ -0.23
CCM2-216ENST00000488727 FAM231CP0DMU5 169 aa13.61□□□□□ -0.23
CCM2-216ENST00000488727 PTTG1IPP53801 180 aa13.61□□□□□ -0.23
CCM2-216ENST00000488727 C20orf203Q8NBC4 194 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms