RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 SFTA2Q6UW10 78 aa8.82□□□□□ -1
HDAC6-230ENST00000488543 C2orf66Q6UXQ4 117 aa8.82□□□□□ -1
HDAC6-230ENST00000488543 HIST1H4GQ99525 98 aa8.82□□□□□ -1
HDAC6-230ENST00000488543 CSTL1Q9H114 145 aa8.82□□□□□ -1
HDAC6-230ENST00000488543 INSL3P51460 131 aa8.82□□□□□ -1
HDAC6-230ENST00000488543 RPL39P62891 51 aaKnown RBP8.82□□□□□ -1
HDAC6-230ENST00000488543 BAALCQ8WXS3 180 aa8.82□□□□□ -1
HDAC6-230ENST00000488543 XCL2Q9UBD3 114 aa8.82□□□□□ -1
HDAC6-230ENST00000488543 CYSLTR1Q9Y271 337 aa8.82□□□□□ -1
HDAC6-230ENST00000488543 F8VRH5 84 aa8.81□□□□□ -1
HDAC6-230ENST00000488543 H7C1H1 209 aa8.81□□□□□ -1
HDAC6-230ENST00000488543 C1orf158Q8N1D5 194 aa8.81□□□□□ -1
HDAC6-230ENST00000488543 SYT8Q8NBV8 401 aa8.81□□□□□ -1
HDAC6-230ENST00000488543 GIG44P09565 113 aaPredicted RBP8.81□□□□□ -1
HDAC6-230ENST00000488543 HTN1P15515 57 aa8.81□□□□□ -1
HDAC6-230ENST00000488543 NEXN-AS1Q8NBZ9 246 aa8.81□□□□□ -1
HDAC6-230ENST00000488543 TOMM6Q96B49 74 aa8.81□□□□□ -1
HDAC6-230ENST00000488543 PLEKHB2Q96CS7 222 aa8.81□□□□□ -1
HDAC6-230ENST00000488543 TEX48A0A1B0GUV7 120 aa8.8□□□□□ -1
HDAC6-230ENST00000488543 PRSS29PA6NIE9 313 aa8.8□□□□□ -1
HDAC6-230ENST00000488543 CRYGDP07320 174 aa8.8□□□□□ -1
HDAC6-230ENST00000488543 FAM74A4Q5TZK3 123 aa8.8□□□□□ -1
HDAC6-230ENST00000488543 C11orf72Q8NBR9 251 aa8.8□□□□□ -1
HDAC6-230ENST00000488543 LINC01587Q99440 93 aa8.8□□□□□ -1
HDAC6-230ENST00000488543 NOTCH1P46531 2555 aa8.8□□□□□ -1
HDAC6-230ENST00000488543 IGLL5B9A064 214 aa8.8□□□□□ -1
HDAC6-230ENST00000488543 G3V4G9 280 aa8.8□□□□□ -1
HDAC6-230ENST00000488543 RPL35AP18077 110 aaKnown RBP8.8□□□□□ -1
HDAC6-230ENST00000488543 PLNP26678 52 aa8.8□□□□□ -1
HDAC6-230ENST00000488543 C12orf74Q32Q52 190 aa8.8□□□□□ -1
HDAC6-230ENST00000488543 TM2D2Q9BX73 214 aa8.8□□□□□ -1
HDAC6-230ENST00000488543 H3BMG7 143 aa8.79□□□□□ -1
HDAC6-230ENST00000488543 WFDC2Q14508 124 aa8.79□□□□□ -1
HDAC6-230ENST00000488543 ZNF876PQ49A33 203 aa8.79□□□□□ -1
HDAC6-230ENST00000488543 SUMO4Q6EEV6 95 aa8.79□□□□□ -1
HDAC6-230ENST00000488543 PRADC1Q9BSG0 188 aa8.79□□□□□ -1
HDAC6-230ENST00000488543 F5H697 171 aa8.79□□□□□ -1
HDAC6-230ENST00000488543 TSHBP01222 138 aa8.79□□□□□ -1
HDAC6-230ENST00000488543 ZNF415Q09FC8 603 aa8.79□□□□□ -1
HDAC6-230ENST00000488543 ORMDL2Q53FV1 153 aa8.79□□□□□ -1
HDAC6-230ENST00000488543 OR11H2Q8NH07 326 aa8.79□□□□□ -1
HDAC6-230ENST00000488543 TRBV7-3A0A075B6L6 115 aa8.78□□□□□ -1
HDAC6-230ENST00000488543 OR5A1Q8NGJ0 315 aa8.78□□□□□ -1
HDAC6-230ENST00000488543 C20orf78Q9BR46 151 aa8.78□□□□□ -1
HDAC6-230ENST00000488543 TP53TG1Q9Y2A0 90 aa8.78□□□□□ -1
HDAC6-230ENST00000488543 MYMXA0A1B0GTQ4 84 aa8.78□□□□□ -1
HDAC6-230ENST00000488543 AZU1P20160 251 aa8.78□□□□□ -1
HDAC6-230ENST00000488543 SH2D6Q7Z4S9 175 aa8.78□□□□□ -1
HDAC6-230ENST00000488543 PTH2Q96A98 100 aa8.78□□□□□ -1
HDAC6-230ENST00000488543 OPRPNQ99935 248 aaPredicted RBP8.78□□□□□ -1
HDAC6-230ENST00000488543 GEMIN7Q9H840 131 aaKnown RBP8.78□□□□□ -1
HDAC6-230ENST00000488543 C11orf86A6NJI1 115 aa8.77□□□□□ -1.01
HDAC6-230ENST00000488543 NBEAL1Q6ZS30 2694 aa8.77□□□□□ -1.01
HDAC6-230ENST00000488543 TRAV12-1A0A0B4J245 112 aa8.77□□□□□ -1.01
HDAC6-230ENST00000488543 ZNF815PA8K554 130 aa8.77□□□□□ -1.01
HDAC6-230ENST00000488543 E9PLD3 99 aa8.77□□□□□ -1.01
HDAC6-230ENST00000488543 M0R2P5 195 aa8.77□□□□□ -1.01
HDAC6-230ENST00000488543 MORN3Q6PF18 240 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-230ENST00000488543 IL17DQ8TAD2 202 aa8.77□□□□□ -1.01
HDAC6-230ENST00000488543 MGAM2Q2M2H8 2515 aa8.76□□□□□ -1.01
HDAC6-230ENST00000488543 KRTAP10-11P60412 298 aa8.76□□□□□ -1.01
HDAC6-230ENST00000488543 ZNF561-AS1K7EIQ3 104 aa8.76□□□□□ -1.01
HDAC6-230ENST00000488543 PPP1R17O96001 155 aa8.76□□□□□ -1.01
HDAC6-230ENST00000488543 PIK3CD-AS1Q5SR53 167 aa8.76□□□□□ -1.01
HDAC6-230ENST00000488543 IGHV3OR16-12A0A075B7B8 117 aa8.75□□□□□ -1.01
HDAC6-230ENST00000488543 M0QY20 66 aa8.75□□□□□ -1.01
HDAC6-230ENST00000488543 WIPF1O43516 503 aa8.75□□□□□ -1.01
HDAC6-230ENST00000488543 TSPEAR-AS2P59090 65 aa8.75□□□□□ -1.01
HDAC6-230ENST00000488543 RPL32P62910 135 aaKnown RBP8.75□□□□□ -1.01
HDAC6-230ENST00000488543 CSNK1G2-AS1Q8NCQ2 148 aa8.75□□□□□ -1.01
HDAC6-230ENST00000488543 IGLV4-69A0A075B6H9 119 aa8.75□□□□□ -1.01
HDAC6-230ENST00000488543 ZNF56Q15929 161 aa8.75□□□□□ -1.01
HDAC6-230ENST00000488543 SCGB1D4Q6XE38 83 aa8.75□□□□□ -1.01
HDAC6-230ENST00000488543 ZFP2Q6ZN57 461 aa8.75□□□□□ -1.01
HDAC6-230ENST00000488543 TRBV6-5A0A0K0K1A5 114 aa8.74□□□□□ -1.01
HDAC6-230ENST00000488543 POLR2KP53803 58 aaKnown RBP8.74□□□□□ -1.01
HDAC6-230ENST00000488543 MRPL16Q9NX20 251 aaKnown RBP8.74□□□□□ -1.01
HDAC6-230ENST00000488543 ETDBQ3ZM63 59 aa8.74□□□□□ -1.01
HDAC6-230ENST00000488543 IGHV3-64A0A075B6Q5 118 aa8.73□□□□□ -1.01
HDAC6-230ENST00000488543 SDHAF1A6NFY7 115 aa8.73□□□□□ -1.01
HDAC6-230ENST00000488543 A8MZ25 164 aa8.73□□□□□ -1.01
HDAC6-230ENST00000488543 RRN3P1Q2M238 152 aa8.73□□□□□ -1.01
HDAC6-230ENST00000488543 IGHV3-73A0A0B4J1V6 119 aa8.73□□□□□ -1.01
HDAC6-230ENST00000488543 A8MWV9 139 aa8.73□□□□□ -1.01
HDAC6-230ENST00000488543 APOMO95445 188 aa8.73□□□□□ -1.01
HDAC6-230ENST00000488543 CFAP126Q5VTH2 177 aa8.73□□□□□ -1.01
HDAC6-230ENST00000488543 EDA2RQ9HAV5 297 aa8.73□□□□□ -1.01
HDAC6-230ENST00000488543 TMEM170BQ5T4T1 132 aa8.72□□□□□ -1.01
HDAC6-230ENST00000488543 ZNRF2Q8NHG8 242 aa8.72□□□□□ -1.01
HDAC6-230ENST00000488543 LINC01549A6NIU2 74 aa8.72□□□□□ -1.01
HDAC6-230ENST00000488543 IGIPA6NJ69 53 aa8.72□□□□□ -1.01
HDAC6-230ENST00000488543 RS1O15537 224 aa8.72□□□□□ -1.01
HDAC6-230ENST00000488543 SRSF9Q13242 221 aaKnown RBP eCLIP8.72□□□□□ -1.01
HDAC6-230ENST00000488543 TMEM263Q8WUH6 116 aaKnown RBP8.72□□□□□ -1.01
HDAC6-230ENST00000488543 C1QTNF4Q9BXJ3 329 aa8.72□□□□□ -1.01
HDAC6-230ENST00000488543 SPANXB1Q9NS25 103 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-230ENST00000488543 PLAC8L1A1L4L8 177 aa8.71□□□□□ -1.01
HDAC6-230ENST00000488543 TAL2Q16559 108 aa8.71□□□□□ -1.01
HDAC6-230ENST00000488543 Q6ZSN1 163 aa8.71□□□□□ -1.01
HDAC6-230ENST00000488543 GTSF1LQ9H1H1 148 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms