RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 C11orf52Q96A22 123 aa3.88□□□□□ -1.79
CDHR3-213ENST00000488386 TCEAL7Q9BRU2 100 aa3.88□□□□□ -1.79
CDHR3-213ENST00000488386 MANBALQ9NQG1 85 aa3.88□□□□□ -1.79
CDHR3-213ENST00000488386 TRBV7-3A0A075B6L6 115 aa3.87□□□□□ -1.79
CDHR3-213ENST00000488386 K7EP13 123 aa3.87□□□□□ -1.79
CDHR3-213ENST00000488386 S100A9P06702 114 aaKnown RBP3.87□□□□□ -1.79
CDHR3-213ENST00000488386 INAFM2P0DMQ5 153 aa3.87□□□□□ -1.79
CDHR3-213ENST00000488386 NKX2-5P52952 324 aaPredicted RBP3.87□□□□□ -1.79
CDHR3-213ENST00000488386 GAGE6Q13070 117 aa3.87□□□□□ -1.79
CDHR3-213ENST00000488386 MPV17L2Q567V2 206 aa3.87□□□□□ -1.79
CDHR3-213ENST00000488386 NTM-AS1Q6ZSK4 140 aa3.87□□□□□ -1.79
CDHR3-213ENST00000488386 C15orf54Q8N8G6 183 aa3.87□□□□□ -1.79
CDHR3-213ENST00000488386 MED9Q9NWA0 146 aa3.87□□□□□ -1.79
CDHR3-213ENST00000488386 KIF25-AS1Q9Y6Z4 181 aa3.87□□□□□ -1.79
CDHR3-213ENST00000488386 URGCP-MRPS24S4R325 110 aa3.87□□□□□ -1.79
CDHR3-213ENST00000488386 HERC1Q15751 4861 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 A0A087WWC5 75 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 A0A087WX48 190 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 TRBV6-8A0A0A6YYG3 113 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 TRAV8-3A0A0A6YYJ7 113 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 TRAV1-1A0A0B4J248 108 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 TRBV10-1A0A0K0K1A3 114 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 C19orf71A6NCJ1 209 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 K7EN84 100 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 HLA-DQA1P01909 254 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 OR5AL1P0C617 328 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 IGLC6P0CF74 106 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 BCL2P10415 239 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 CAMPP49913 170 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 GNG4P50150 75 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 RAB4BP61018 213 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 MEF2BQ02080 365 aaPredicted RBP3.86□□□□□ -1.79
CDHR3-213ENST00000488386 LAGE3Q14657 143 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 CFAP161Q6P656 301 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 ATRAIDQ6UW56 229 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 LYZL1Q6UWQ5 148 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 ENHOQ6UWT2 76 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 ALKAL2Q6UX46 152 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 SLC51BQ86UW2 128 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 C9orf62Q8N4C0 152 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 FER1L6-AS1Q8NA97 138 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 OR10G8Q8NGN5 311 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 CHCHD5Q9BSY4 110 aa3.86□□□□□ -1.79
CDHR3-213ENST00000488386 RNASE7Q9H1E1 156 aaKnown RBP3.86□□□□□ -1.79
CDHR3-213ENST00000488386 TRAV26-2A0A0B4J265 109 aa3.85□□□□□ -1.79
CDHR3-213ENST00000488386 A0A1B0GVG6 124 aa3.85□□□□□ -1.79
CDHR3-213ENST00000488386 P01737 135 aa3.85□□□□□ -1.79
CDHR3-213ENST00000488386 ANGP03950 147 aaKnown RBP3.85□□□□□ -1.79
CDHR3-213ENST00000488386 CXCL1P09341 107 aa3.85□□□□□ -1.79
CDHR3-213ENST00000488386 SMIM17P0DL12 118 aa3.85□□□□□ -1.79
CDHR3-213ENST00000488386 RAB5CP51148 216 aa3.85□□□□□ -1.79
CDHR3-213ENST00000488386 CEBPGP53567 150 aa3.85□□□□□ -1.79
CDHR3-213ENST00000488386 FOXA3P55318 350 aaPredicted RBP3.85□□□□□ -1.79
CDHR3-213ENST00000488386 EIF5AL1Q6IS14 154 aaKnown RBP3.85□□□□□ -1.79
CDHR3-213ENST00000488386 KCNIP4Q6PIL6 250 aa3.85□□□□□ -1.79
CDHR3-213ENST00000488386 AKAP14Q86UN6 197 aa3.85□□□□□ -1.79
CDHR3-213ENST00000488386 FRZBQ92765 325 aa3.85□□□□□ -1.79
CDHR3-213ENST00000488386 AP1S3Q96PC3 154 aa3.85□□□□□ -1.79
CDHR3-213ENST00000488386 VPS13BQ7Z7G8 4022 aa3.85□□□□□ -1.79
CDHR3-213ENST00000488386 IGLV10-54A0A075B6I4 117 aa3.84□□□□□ -1.79
CDHR3-213ENST00000488386 TEX46H3BTG2 121 aa3.84□□□□□ -1.79
CDHR3-213ENST00000488386 M0QY20 66 aa3.84□□□□□ -1.79
CDHR3-213ENST00000488386 IFNA1P01562 189 aa3.84□□□□□ -1.79
CDHR3-213ENST00000488386 CRPP02741 224 aa3.84□□□□□ -1.79
CDHR3-213ENST00000488386 NTF3P20783 257 aa3.84□□□□□ -1.79
CDHR3-213ENST00000488386 RBX1P62877 108 aa3.84□□□□□ -1.79
CDHR3-213ENST00000488386 OCC1Q8TAD7 63 aa3.84□□□□□ -1.79
CDHR3-213ENST00000488386 GFRA4Q9GZZ7 299 aa3.84□□□□□ -1.79
CDHR3-213ENST00000488386 VAX2Q9UIW0 290 aa3.84□□□□□ -1.79
CDHR3-213ENST00000488386 IGLV4-60A0A075B6I1 120 aa3.83□□□□□ -1.8
CDHR3-213ENST00000488386 PDE6DO43924 150 aa3.83□□□□□ -1.8
CDHR3-213ENST00000488386 NDUFS6O75380 124 aaKnown RBP3.83□□□□□ -1.8
CDHR3-213ENST00000488386 GAS8-AS1O95177 125 aa3.83□□□□□ -1.8
CDHR3-213ENST00000488386 RPS20P60866 119 aaKnown RBP3.83□□□□□ -1.8
CDHR3-213ENST00000488386 CACNG7P62955 275 aa3.83□□□□□ -1.8
CDHR3-213ENST00000488386 SCXQ7RTU7 201 aa3.83□□□□□ -1.8
CDHR3-213ENST00000488386 LINC00269Q8N2A0 174 aa3.83□□□□□ -1.8
CDHR3-213ENST00000488386 GTSF1Q8WW33 167 aa3.83□□□□□ -1.8
CDHR3-213ENST00000488386 RMI2Q96E14 147 aa3.83□□□□□ -1.8
CDHR3-213ENST00000488386 RPL39LQ96EH5 51 aaKnown RBP3.83□□□□□ -1.8
CDHR3-213ENST00000488386 TMEM70Q9BUB7 260 aa3.83□□□□□ -1.8
CDHR3-213ENST00000488386 RPP21Q9H633 154 aaKnown RBP3.83□□□□□ -1.8
CDHR3-213ENST00000488386 TRBV25-1A0A075B6N4 114 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 IGKV3OR2-268A0A0C4DH90 116 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 PRSS1P07477 247 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 TAGLN2P37802 199 aaKnown RBP3.82□□□□□ -1.8
CDHR3-213ENST00000488386 CTRLP40313 264 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 Q0VG73 95 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 KRTAP26-1Q6PEX3 210 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 RASL11AQ6T310 242 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 Q6ZSA8 131 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 Q75L30 129 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 GATD1Q8NB37 220 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 C20orf203Q8NBC4 194 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 PGLYRP4Q96LB8 373 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 CHCHD7Q9BUK0 85 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 DPH3P1Q9H4G8 78 aa3.82□□□□□ -1.8
CDHR3-213ENST00000488386 LRP1Q07954 4544 aaKnown RBP3.82□□□□□ -1.8
CDHR3-213ENST00000488386 FLG2Q5D862 2391 aaPredicted RBP3.81□□□□□ -1.8
CDHR3-213ENST00000488386 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms